Hemicordylus capensis (graceful crag lizard): 128326766
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Entry
128326766 CDS
T08891
Symbol
PKD2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hcg03037
]
128326766 (PKD2)
04040 Ion channels [BR:
hcg04040
]
128326766 (PKD2)
Cilium and associated proteins [BR:
hcg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128326766 (PKD2)
Ion channels [BR:
hcg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128326766 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
SU10_portal
Motif
Other DBs
NCBI-GeneID:
128326766
NCBI-ProteinID:
XP_053110238
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All DBs
Position
5:22148558..22183973
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AA seq
962 aa
AA seq
DB search
MAGAGGGGGGSRTGLCPPGGLEQLELGRLRDPLGVGDGGGGGSSSSGGSSCSPSPPLSSC
SRQAWSRDNPGFEPEEEEGARAAAAAAAGPVLQMDVEWGGRGGGEAASPSLGAPSGRTED
AESGRQRRRRRRRRGEEEEDDEGDRRCPAGGGGGGGGDAPPSPFPPREDEEPAEPPPYRV
AWAKGLARRLRGLWGTRLMEETTSREKYLKSVLRELITYLLFLLVLCILSYGMVSSSMYY
YTRVMSQLFLDTPVSKMEKTNFKMLSTMEDFWKFTEGPLLDGLYWEMWYNNKTVAENRSF
IYHENLLLGVPRIRQLRVRNDSCSIPEDLKDEIKDCYDVYSVVSEDTAPFGLRNGTAWTY
TSEKDLNGSSHWGLIATYSGAGYYQDLSKSREETSILIAGLKNNLWLDRGTRATFIDFSV
YNANINLFCIVRLLVEFPPTGGLLTSWQFQPVKLIHYISTFDFFLAVCEIVFCFFILYYV
VEEILEIHIHRLYYFRSLWNCLDILIIVLSIAAIGINIYRTSTVDRLLKELLENQNSFPN
FSPLVYWQTQFNNIAAVTMFFVWMKLFKFISFNRTMSQLSTTMSRCAKDVLGFAIMFFII
FLAYAQLAYLVFGTQIDDFSTLQDSVLTQFRILLGDFDFTEVEEANRVLGPIYFTTFVFF
MFFILLNMFLAIINDAYSEVKSDMSQQKAEMELSDLIKKGYTKAMVRLKLKKTPVDDISE
SLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTELEHQQMRDDLEKERE
DLELDRSSLNRPLSGRSFPRSLDDSEEDDDDDSGHSSRRRGSSSSGVSYEEFQVLVRRVD
RMEHSIGSIVSKIDAVIVKLEAMERTKLKRRDLLGRLLDGVTEDERLGHDTEIHREQMER
LVREELERWESDDTASQASHRLGTPVGLNGQSQTRSSRPSSSQSTEGMDGGGGGNGGNNV
HI
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcggggggcggcggcggaggcagcaggacgggactttgccccccgggcggc
ctcgagcagctagagctgggtcggctgcgggacccgttgggggtcggagacggcggcggc
ggcggcagcagcagcagcggcggctcttcttgctcgccgtcgccgccgctttcctcttgc
tcgagacaggcctggagccgggacaatccaggcttcgagccggaggaggaggaaggggcc
agggcggcggcggcggcggcagcggggccggtgctgcagatggacgtggaatgggggggc
cgcggcggcggcgaggcagcttcgccttccctgggggcgcccagcggccggaccgaagac
gccgagagcgggaggcagcggcggaggcggcgccgacggaggggagaggaggaggaagac
gacgaaggagaccgccgctgccccgccggaggaggaggaggaggcgggggcgacgcgccg
ccctcgcctttccctccccgggaggacgaggagcccgccgagcccccgccctaccgcgtc
gcctgggccaaggggctggcgcgccgcctgcgaggtctgtggggtacaagactaatggaa
gaaaccacaagcagggagaaatacctgaaaagcgttttacgagaactaatcacatacttg
ctttttcttctggttctgtgtattttgtcatatgggatggtgagttctagtatgtactac
tacacaagggtgatgtcacagctctttctggacacaccagtgtcaaaaatggagaagacc
aactttaaaatgctgtccacaatggaagacttctggaagttcactgagggccctttgcta
gatggactctactgggagatgtggtacaacaataaaacagtggcagagaatagaagcttc
atctaccatgagaacctgcttctgggagtgcctcgtatccgacaactgagagtgaggaat
gactcctgttcaatacctgaagatttaaaagatgaaattaaagattgctacgatgtttac
tctgtggtcagtgaggatactgctccatttgggcttcgcaatggaactgcttggacttac
accagtgaaaaagatctgaatgggagcagccattgggggttgattgcaacatacagcgga
gctggatattaccaggatctctccaagagcagagaggagacatctatactgattgctggc
cttaagaacaacctgtggcttgataggggcacaagggcaacatttattgatttttcagta
tataatgcaaacatcaatcttttctgcattgtgaggttgttggtggagttccctccaact
ggtggcctccttacatcttggcaatttcaaccagtgaagctgattcactacatttccact
tttgacttcttcctggctgtctgtgaaattgtattctgcttctttatcctttattatgtt
gtggaagaaatcctggaaatccatattcacagactgtattatttcaggagtctttggaat
tgtcttgatattctcatcattgtgctatccatagcagctataggaattaacatatatcga
acatctactgtggacaggttattgaaggagctgctggaaaatcaaaacagcttcccaaat
ttttcacctttagtgtattggcaaactcagttcaacaatattgcagctgtcactatgttt
tttgtctggatgaagctctttaaatttatcagctttaatcgaacaatgagccagttatcc
accactatgtcacgatgtgccaaagatgttcttggctttgctatcatgtttttcatcatt
ttcctagcatatgctcaacttgcttaccttgtgtttggcacccagattgatgatttcagt
actctccaggacagcgtcttgactcagttccgcatcctgttgggagattttgactttaca
gaggttgaagaagctaacagagttttgggaccaatttatttcactacatttgtgttcttt
atgttcttcattcttttgaacatgtttctggctatcatcaatgatgcatactcagaagtg
aaatcggatatgtcgcagcagaaggctgaaatggaactgtcagatcttataaaaaaggga
tacactaaagctatggtgaggttaaaattgaaaaaaacaccagttgatgacatttcagag
agtctacgtcaaggcggaggcaagttaaactttgatgaactgcggcaagatctgaaggga
aagggacacacagatgctgagattgaagcgatctttacaaagtatgaccaagatggggat
caggagttgactgagctggaacatcagcaaatgagagatgacttggagaaagaaagggag
gacttggagctagacagaagctctctgaaccgtccattgagtggccgcagcttcccacga
agcctagatgactctgaagaggatgatgacgatgacagtgggcacagctccaggaggaga
ggaagcagctcaagtggggtttcctatgaagagtttcaagtgctggtgaggcgcgtggac
cgcatggagcactccattggcagcattgtttcgaagatcgatgcagtcattgtgaagctg
gaagcgatggagagaacaaaactgaaaaggagagatctgctagggaggctgcttgatggg
gttacagaggatgaaaggttgggccatgacactgaaatccacagggaacaaatggaaaga
ctcgttcgagaagaactggaacgctgggaatcagatgatacggcatcccaagcgagccac
cgattgggaaccccagtgggactcaatggccaatcccagactcggagttcccgcccttct
tcctcgcaatccacagaagggatggatggtggaggagggggaaatggtgggaacaatgtc
catatctag
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