Hemicordylus capensis (graceful crag lizard): 128326788
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Entry
128326788 CDS
T08891
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04137
Mitophagy - animal
hcg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128326788 (OPTN)
04137 Mitophagy - animal
128326788 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128326788 (OPTN)
Membrane trafficking [BR:
hcg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128326788 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128326788 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
128326788 (OPTN)
Xenophagy
Cargo receptors
128326788 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
CMD
Motif
Other DBs
NCBI-GeneID:
128326788
NCBI-ProteinID:
XP_053110307
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All DBs
Position
5:complement(142673186..142706172)
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AA seq
566 aa
AA seq
DB search
MSKKPLSFPTKNEDCSKNEVENGHPNLSPPALGTYTVEELVQQMKELITENNGLKEAMRQ
RNQAMKDRFEEVSAWREKLKEEREFYETKFKEARQCLATKCNENEALKKQLQILEERVVL
LSNECAVSKKEMVQELEQLKTQVVKLQTEKADLVAIISELQLKLNTTVTEDSFVEIGMHE
GEVNGALKENKDLSGKRLGDTAAYSRSRSVDETKNYLESEELTVSQLLRCLRNETQRREA
LEKELQKEKDRLLKLEEKADQFEKGTQTDLEEEDMKEREESVGSEVETLNLQVSVLFKEL
QETHAKLKEAEQIQKRLQEKCQVLEQKHSASAGDLDEKQQLLYTIKKLELQVESMQSEIK
LEQTKTKDEKAKFNKLQDAYSKLLPELNNAMKTVEELKEKEARKIDKAEADELTRRLDLA
EKALAAKQLQIDEMKQTIAKQEEEIETVAVLRAQMELYCSDFHAERAAREKIHEEKEQLA
VQVAYLLSEKHDHEDLSRNSLAELQSRHGARLPSNQDNSSNFGQGGAEDQDWEQQPRNIP
VHSCPKCGMILPDIDTLQIHVMDCII
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaagccattaagcttccctaccaaaaatgaagactgtagcaagaatgaggtg
gaaaatggacatccaaacctatctcctcctgctcttggtacatacacagttgaagagctg
gtacagcaaatgaaagagcttatcactgagaacaatggacttaaagaagccatgaggcag
cgcaatcaagccatgaaggatcgttttgaagaggtttctgcgtggagagagaagctgaaa
gaagagcgggaattttatgagaccaaattcaaagaggctagacagtgcttggcaaccaaa
tgtaacgagaatgaagcacttaaaaaacaactccaaattttagaagaaagagtagtacta
ctctcaaatgaatgtgcagtttccaaaaaggagatggtacaagaactggagcagctgaag
acacaggtggtgaagctccagactgagaaggcagatctggttgccattatttcagagctg
cagcttaaactcaacaccaccgtaaccgaagactcatttgttgagattggaatgcatgaa
ggagaagtaaatggggctttaaaagaaaataaagatctaagtggcaaaagactgggtgac
acagctgcctacagtaggagcagatcggtggatgaaacaaaaaactacttggaatctgaa
gaattgactgtcagccagcttcttcgttgcctcaggaatgaaactcagaggagggaggcg
ttagaaaaagagcttcagaaagagaaggacagattgttgaagctggaagagaaagcagat
caatttgagaaaggcacgcaaacggaccttgaagaagaggacatgaaagagagagaagag
agtgtgggcagtgaagtagaaactctaaacctgcaagtgtctgtcctgttcaaagaactt
caggagacacatgccaaattaaaagaagctgagcagatccagaaaaggctgcaagaaaag
tgtcaggtacttgaacaaaaacatagtgccagtgctggagacttggatgagaagcagcag
ctgttgtacaccattaagaagctggaacttcaggtggagagcatgcagtccgaaatcaag
ctggagcaaaccaagacgaaagatgagaaagccaaatttaataagttgcaagatgcatac
agcaaactcttgcctgaactgaacaatgcaatgaaaacagttgaagaattaaaagagaaa
gaggccagaaaaatagataaggctgaggctgacgaattaactcgcaggttggatctggca
gagaaagccctagctgccaaacagcttcagatagacgaaatgaagcagaccattgccaaa
caggaggaagaaattgagactgtggctgtcctccgagctcagatggagttgtattgttct
gacttccatgctgaaagagcagcacgagagaaaatacacgaggaaaaggagcaattggct
gtgcaggtggcatacttgctgtcggagaaacatgaccatgaagatctcagcagaaactca
ttggcagaattgcaaagtcgtcacggagctaggctaccatcaaatcaggataactcatcc
aattttggccaaggtggagcagaggaccaggattgggagcagcaaccgaggaatatccca
gtacattcctgtccaaagtgtggaatgattcttcctgatatagacacacttcagattcat
gttatggactgtatcatctaa
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