Hemicordylus capensis (graceful crag lizard): 128326918
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Entry
128326918 CDS
T08891
Symbol
LRP6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04150
mTOR signaling pathway
hcg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128326918 (LRP6)
04150 mTOR signaling pathway
128326918 (LRP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128326918 (LRP6)
Membrane trafficking [BR:
hcg04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128326918 (LRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
SGL
EGF_LRP2
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
128326918
NCBI-ProteinID:
XP_053110779
LinkDB
All DBs
Position
5:131518676..131665779
Genome browser
AA seq
1684 aa
AA seq
DB search
MGGDDKPSPQCLGTSPLALKRKETADCVCVSLSLSYERAAEVLLFFSTSFIPAATTTSFL
FSPPVRARGEKMGAVLRSLLVCGLCSLARASPLLLYANRRDLRLVDASQGNENATVVVGG
LEDAAAVDFVFIHGLIYWSDVSEEAIKRTEFNKTGSVQNVVISGLLSPDGLACDWLGEKL
YWTDSETNRIEVSNLDGSWRKVLFWQELDQPRAIALDPARGFMYWTDWGEVPKIERAGMD
GSSRSVVINTDIYWPNGLTLDYEEQKLYWADAKLNFIHRSNLDGTHRQAVIKGSLPHPFA
LTLYGDTLYWTDWTTRSVLACNKNTGENLREIHSNIFSPMDIHVFSQQRQPNATNPCGTN
NGGCSHLCLMSPAKSSYQCACPTGVKLLENEKTCKDGAMELLLLARRTDLRRVSLDTPDF
TDIVLQLEDIRHAIAIDYDPVEGYVYWTDDEVRAIRRSFIDGSASQFVVQAQIAHPDGIA
VDWIARNLYWTDTGTDRIEVTKLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIP
KIERAALDGSDRVVLVNTSLGWPNGLALDYTENRIYWGDAKTDKIEVMNTDGTNRRVLVE
EKLPHIFGFTLLGDYIYWTDWQRRSIERVHKRTAERDIIIDQLPDLMGLKATNVHQTIGT
NPCAESNGGCSHLCLYRPQGLRCACPIGLELISDMRTCIVPEAFLLFSRRADIRRISLET
NNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEG
MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGG
KPKIDRAAMDGSERSTLVPNVGRANGLTIDYVKRRLYWTDLDTNLIESSNMLGLDRDVIA
DDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTVIQNHLDYVMDILVFHSSRQAG
WNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNSDNRTCSAPTSFLLFSQKNAINRMVI
DEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNIIRKSQEDGSQSFTVVTSPVPN
QNLDIQPYDLSIDIYSRYIYWTCEATNVINVTHLDGRLMGVVLKSDQDRPRAIVVNPEKG
YMYFTNLQERSPPKIERAALDGTEREVLFSSGLSKPVALAIDSQLGKLFWADSDLRRIES
SDLSGANRIVIEDSNILQPVGLTVFENWLYWIDKHQQMIEKIDMTGREGRMKVQARIAQL
SDIHAVKELNTKEYKKHPCSQENGGCSHICIVKGDGTTRCSCPVHLVLLQNELSCGEPPT
CSPQHFTCFTGEIDCIPVAWRCDGYTECEDASDEKNCPVCSDSQFQCESGQCIDSILQCN
GEANCQDSSDEKNCKVLCLSDQFRCASGQCIGKNKKCDHNLDCTDSSDEQGCYTTEEPAP
QATSAIGSVIGVFLTVFVVATVYFACQKLLCPRMKGDGETMTNDYVVHGPASVPLGYVPH
PSSLSGSLPGMSRGKSVISSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPTILNPP
PSPATERSHYTMEFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRVM
TIVGKGYTSDLNYDSEPVPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPC
TDSS
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggatgacaaacccagcccacagtgtttgggaacttctcctttggctctgaaa
aggaaagaaaccgctgactgtgtgtgtgtctctctctctctctcttatgagagggcggca
gaggtgctgctgttcttctcgacctccttcatccccgccgctactaccacctccttcctc
ttctccccgccggtgagagccagaggagagaagatgggcgccgtcctgaggagcctcctg
gtctgcggtttatgttccctggcgagagcttctccattattgctgtatgcaaatcgtcga
gatctacgattggtggatgcctcacaggggaatgagaatgctacggttgtggtgggtggc
ttggaagatgcggctgcagttgactttgttttcattcatggcttgatatactggagtgat
gtaagtgaagaagccattaaacgaacagaattcaacaaaacagggagtgtacaaaatgta
gttatttccgggcttttgtcacctgatggcctggcttgtgattggttgggtgagaaacta
tactggacggattctgaaacaaaccggattgaagtttcaaatttagatggatcttggcga
aaagtcttgttctggcaagagttggatcaacccagagcaattgccttggatcctgcaaga
ggattcatgtattggacagactggggagaagtgccaaagatagagcgtgctggaatggat
ggttcgagccgatctgtagtaatcaacacagacatctattggccaaatggattgacattg
gattatgaagaacagaagctctattgggcagatgcaaaactgaatttcattcacagatca
aatttggatggaacgcatcggcaagctgtcattaaaggatctcttccacacccttttgct
ctgacattgtatggggacacactgtactggactgattggaccactcgctcagtcttggcc
tgcaacaaaaatactggggagaacctgcgtgaaatacattccaacatattttctcccatg
gatattcatgtgttcagccaacagagacagcctaatgctacaaacccatgtggaaccaat
aatggtggctgctcccatttgtgtttgatgtctcctgccaagtcctcttatcagtgtgca
tgccccacaggcgtgaagctccttgagaatgaaaagacctgcaaagatggtgcaatggag
ttgctattattagcccgaaggactgacttgaggcgggtatccttggacactccggatttc
actgatattgttttgcaactggaagacattagacatgccattgctatcgactatgatcca
gtagaagggtacgtttactggacagatgatgaggtgagggccatccgtcgttctttcatt
gatgggtcagctagccaatttgttgtccaggcacaaattgcacatcctgatggcattgct
gtagactggattgcccgtaacctttattggactgacactggtacagatcgcattgaagta
acaaaacttaatgggacaatgaggaagatcttgatctcagaagacttggaagaaccaaga
gctatagttctggatcccatggtcggctacatgtactggactgactggggagagattcca
aagattgagagggctgcactagatggatcagacagagtggtgctggtgaatacttcactt
ggttggccaaatggattggcactggattatacagaaaacaggatatactggggagatgcc
aaaaccgacaaaattgaggtcatgaacacagatggaaccaataggagagtccttgtggag
gaaaagctgcctcatatttttgggttcacattgctgggggactacatttattggacagac
tggcaaaggcgaagcattgagcgagttcataagcggacagctgaaagggacatcatcata
gaccagctgcctgacctgatgggtttgaaggctacaaatgttcatcagacaattggtaca
aatccttgtgcagagtccaatgggggctgcagccacctctgcctatacaggcctcagggt
ttgcgctgtgcctgccccataggcctggagctcatcagtgacatgaggacctgcattgtc
ccagaagctttcctgctgttttcccgtagagcagatatccggcgaatctccctggagacc
aacaataacaatgttgccatcccactcacaggagttaaagaagcttccgctctggatttt
gatgtcactgacaatcgcatatattggacagatatctcattaaagactatcagtagggca
ttcatgaatggtagtgccctggaacatgtggttgagtttggcctggattatccagaaggc
atggctgtagactggctagggaagaacctttattgggctgatactggaacaaatcgtatt
gaagtgtcaaaattagatgggcagcatcgccaggttctggtgtggaaggacctggatagt
cctcgagcattggcactggatcctgctgaagggttcatgtactggacagaatggggtgga
aagccaaaaattgaccgagctgcaatggatggtagcgaacgatctacactggtgccaaat
gtgggacgtgctaacgggctgacaattgattatgttaaaagaaggctgtattggactgat
ctggacaccaacctgattgaatcttcaaatatgctggggctggaccgtgatgttatagca
gatgacttgcctcatccatttggtctaacccaatatcaggattacatctattggacagac
tggagccggcggagcattgaacgtgccaacaaaaccagtgggcagaacaggacggtcatc
caaaaccacttggattatgtgatggatatcctagtcttccattcgtcccggcaagcaggc
tggaatgagtgtgcttccagtaatgggcattgttcccacctctgcttggcagtgcctgtt
ggtggttttgtctgtggatgtccagctcactactccttgaactctgacaacagaacatgt
agtgcacctacaagcttcctgctcttcagtcagaagaatgcaatcaatcgcatggtgata
gatgaacagcagagcccagatatcatccttccaattcacagtctcaggaatgtccgggcc
attgactatgaccctctagataaacaactctattggattgactctcggcaaaacattatc
aggaagtcacaggaggatggcagtcagagctttacagttgtgacgagtccagttccaaat
cagaacctagatatacagccctatgacctgagcattgacatctacagccgctacatttat
tggacttgtgaggccacaaatgttatcaacgtgacacacctggatgggagactgatggga
gtggtgctgaaaagtgatcaggataggcccagggccattgttgtgaacccggagaaaggg
tatatgtattttaccaatctccaagagaggtctcctcccaaaatagaaagggcagcatta
gatggaactgaacgtgaggtactcttttccagtggactgagtaagcctgtagctttggca
attgacagccaattgggaaagctcttctgggcggattctgatctccggagaattgaaagc
agtgacctctcaggtgccaatcggatagttatagaagattccaacatcttacaacctgta
ggactgactgtatttgaaaactggctctactggatagataagcatcaacagatgattgaa
aaaattgatatgactggtcgagaaggacgtatgaaagtgcaagctcgtattgctcagctc
agtgatatacatgctgttaaagaactcaacacgaaggagtacaaaaaacacccatgctca
caagaaaatggtggctgctcccacatttgtattgtgaaaggtgatggaaccacacgttgt
tcctgcccagtgcaccttgtcctgcttcaaaatgaactttcttgtggagaacctccaaca
tgctccccgcaacacttcacgtgtttcactggagagattgactgcattcctgtagcttgg
cgctgtgatggatacactgaatgtgaagatgccagtgatgaaaagaactgccctgtgtgc
tcagactcccagtttcagtgtgagagtgggcagtgcatagacagcatccttcagtgtaat
ggagaggcaaattgccaggacagctcagatgagaagaactgcaaagtgctttgtttatca
gaccagttccgatgtgccagtggacagtgcatagggaaaaacaagaaatgtgaccacaac
ttagactgtactgacagctccgatgaacaaggatgctacacaacagaggaaccagccccg
caagccaccagtgctataggctctgtcattggtgtgtttctcacagtttttgtggttgca
actgtgtattttgcttgccagaagctgttgtgcccacgcatgaaaggagatggagaaaca
atgaccaatgactatgtggtgcatggaccagcttctgtacctctgggctatgtgcctcac
ccaagctctctctctggatctcttcctggaatgtcccgtggtaaatctgtgatcagctcc
ctcagcattatgggtggaagtagtgggcctccatatgacagggcccatgttactggggca
tcatccagtagttcctcaagcaccaagggcacttactttccaacgatcttgaaccctcct
ccctcaccagctactgagcgttcacattacactatggaatttggttattcttcaaacagc
ccatctacccatcgatcatacagttataggccatacagctaccggcattttgcccctccc
acgacaccatgcagcacagatgtttgcgacagcgactatgcccccagccgtagagtgatg
acgatagtgggaaagggttacaccagtgacttgaactatgattctgagcctgtgccaccg
ccaccgacaccgcgcagccagtacttgtcggcggaagagaactacgagagctgcccacca
tctccatacacagaacggagctactcccatcacctctacccgccacccccctctccctgc
acggactcctcgtga
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integrated database retrieval system
