Hemicordylus capensis (graceful crag lizard): 128327011
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Entry
128327011 CDS
T08891
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hcg01001
]
128327011 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128327011 (TRIM24)
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128327011 (TRIM24)
Protein kinases [BR:
hcg01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
128327011 (TRIM24)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128327011 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
128327011
NCBI-ProteinID:
XP_053111037
LinkDB
All DBs
Position
5:complement(228743532..228845863)
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AA seq
1044 aa
AA seq
DB search
MDEPPAGAGPCLAAPAAMGGENEAESRQGPADRANGESPLNLLDTCGVCGQHIQSRRPRL
LPCLHSLCLRCLPPPHRYLMLPPPTAPSPGCGPKDPPLPPPPPLLQPSPAPSSPASTPPS
PLHCNPVGVVRCPICGQECAERHIIDNIFVKDTTEVPSSTVEKSNQVCTSCEDNAEANGF
CVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPYHKKEQLKLYC
ETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLVTKLMEKSKYIKCTGEQIQNRI
HEVNRNQKLVEQDIKVAIFTLMVEINKKGKALLHQLECLAKEHRMKLLQQQQEVAGLSKQ
LEHVMNFSKWAVSSGSSTALLYSKRLITYRLRYLLRARCDALPVSNAIIQFHCDPSFWAQ
NIFNLGSLVIEDNETPPHMPKSPVMEPNIQPQCGLSSNQLSKFPTQISLAQLRLQHMQQQ
VLAQRQQAQRRAGPVGLPNPRIAGPMHQTPPPPPPQQPPPRLVNFQNHNLKSNGSVSLSQ
PMRFPQNQNMLHPAVRPNPLQMAFLAQQAIKQWQINSGQVSAASSNANSSTSTPSSPTIN
SAAGYDGKSFVPPMIDLTSTMGGSYTLPALPDIDCSGSISLDSIGRREGTVEQSQHKLPL
HKTIQSPNSSVPSPGLSGPGTVSGVHPPVRSPSVSSVGSRGSSGSSSRPSGADSTQRLPV
VMLEPIRIKQEPGAPSENYDFPVVIVKQETDEESRNKNTTFRRTLLTSMLTSNRNCSSVE
TVLRTQAPDSTGDQPSNGKAAWIRSPHVGDSRKDDDPNEDWCAVCQNGGELLCCDKCPKV
FHLSCHVPILRNFPSGEWICTFCRDLSKPEIAYDCDGPSHVFEEKRKLEGNMGLAPIDQR
KCERLLLYLYCHEMSLAFQDPVPPTVPDYYKIIKKPMDLSTIKNRLQMHHPLYTKPEDIV
ADFRLIFQNCAEFNEPDSEVADAGMKLEVYFEELLKNLYSDREFPAQPYYHADGGSPDLT
DDSDDDFVQPRKKRLKGEERQFFK
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggacgagccccctgcgggagcggggccctgtctggccgcacccgccgccatgggcggg
gagaacgaggcggagagccggcaaggcccggcggaccgggccaatggagagtcgccgctc
aacctgttggacacgtgcggggtgtgcgggcagcacatccagagccggcggcccaggctc
ctgccttgcctccattcgctgtgcctgcgctgcctgcccccgccgcaccgctacctcatg
ttgccgccgcccaccgcgccgtcgccaggctgcggccccaaagacccgccactgccgccg
ccgcctccgttgctccagccttcgcctgccccttcttcgcctgcctccacgccgccctcg
ccgctgcactgcaacccggttggtgttgttcgctgcccaatttgtggccaggaatgtgca
gaaagacatattatagataatatctttgtaaaggatactactgaggttcccagtagtaca
gtggaaaaatcaaatcaggtttgtacaagctgtgaagacaatgcagaagccaatggcttt
tgtgtggaatgtgtggaatggttatgcaagacctgcataagagctcatcaaagagtcaaa
ttcacaaaggatcatacagtcagacagaaagaagaagtatctccagaagccgttggtgta
actagtcagcgacctgtgttctgtccatatcacaaaaaggagcagctgaagctctattgt
gagacttgtgacaagttaacatgtcgggattgtcagttgctggaacacaaggaacacagg
taccagtttattgaagaagcctttcagaatcaaaaggtgataattgacacactggttacc
aagctgatggagaaaagtaaatatataaaatgtacaggggaacagattcaaaataggatc
catgaagtgaatcggaatcagaagctggtggaacaggacattaaagttgctatttttaca
ttgatggtagaaataaacaaaaaggggaaagctctactgcatcagcttgagtgtctagct
aaggaacaccggatgaaacttctacagcaacaacaggaagtggcaggtctttctaaacaa
ctggaacatgtcatgaacttttctaagtgggcggtctctagtggaagcagcacagcattg
ttgtacagcaaacgcctgatcacatatcggttacgatatctacttagagcgaggtgtgat
gccttaccagtatctaatgccatcattcagttccactgtgatcctagcttctgggctcaa
aatattttcaacttaggttctctggtaattgaagataatgagaccccaccacacatgcct
aaaagcccagtgatggaaccaaacatacagccacaatgtggcttatcttcaaatcaacta
tccaagttcccaacacagatcagtttagctcaactgcgacttcagcacatgcagcagcag
gtcctcgctcagaggcagcaggctcaacggagggcaggtcctgtggggctcccaaatcct
agaattgcagggcccatgcaccagactccacctcctccaccacctcagcagccacctcca
cgtttggttaattttcagaatcataacctcaaatctaatggttcagtttctctaagtcag
ccaatgaggtttcctcaaaatcagaatatgctgcatccagccgtaagacccaacccgcta
caaatggcatttttggcacagcaagctattaaacagtggcaaatcaacagtggacaagtt
tctgctgcttcctcaaatgctaacagtagtacatcgactccctccagtcccaccattaat
agtgctgctggatatgatgggaaatcatttgttccgcctatgattgatctgacttcaaca
atgggtggctcctatacactgcctgctcttcccgatattgactgttcaggaagtatttcg
ttggatagcattgggaggagagagggcactgtggagcagagccaacacaaacttccttta
cacaaaactatccagtccccaaactcatcagtgccatctccaggtctctcagggccaggt
actgtatctggtgtccatcccccagttcgttcacccagtgtttccagtgttggaagccga
ggcagctctggctcttctagtagaccatcaggtgctgattcaacccagagactccctgtg
gtcatgttggagcccatcagaataaaacaagagcctggagcgccaagtgagaactatgat
tttccagttgtaatagtgaagcaagaaacagatgaagaatctcggaataaaaataccact
ttccgaagaaccttgcttacctcgatgttgactagcaatcgtaattgttcttctgtagaa
acagttttgagaactcaggcaccagacagtactggtgaccagccttccaatggcaaggca
gcctggatcaggtctcctcatgttggagacagcaggaaagatgatgaccccaatgaagac
tggtgtgcagtatgtcagaatggaggagagcttttatgttgtgataagtgtcctaaagtg
tttcacctttcttgtcatgtccccattctcaggaattttccaagtggcgagtggatttgc
acattctgccgtgatttgtccaaaccagaaatagcatatgattgtgatggcccaagtcat
gtgtttgaagaaaaaagaaaactggaaggaaatatgggattggcacctatagatcagagg
aagtgtgaaagattactgttgtacctttactgccatgaaatgagccttgcctttcaagac
cctgtccctcccacggtgcctgactattataaaataattaagaagccaatggacttgtca
acaatcaagaacagattgcaaatgcatcacccattatacacaaaaccagaggatattgtg
gctgactttagactgatattccaaaactgtgctgagtttaatgagcctgattcagaagtg
gctgatgccggtatgaaactggaagtctactttgaggaacttctgaagaacctttattct
gacagggagtttcctgcccagccctattaccatgctgatggaggcagtccagatttaaca
gatgactcagatgatgattttgtacaaccccggaaaaaacgcctcaaaggggaagagcgg
cagttttttaaataa
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