Hemicordylus capensis (graceful crag lizard): 128327110
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Entry
128327110 CDS
T08891
Symbol
SH3RF1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcg01009
]
128327110 (SH3RF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128327110 (SH3RF1)
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128327110 (SH3RF1)
Protein phosphatases and associated proteins [BR:
hcg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128327110 (SH3RF1)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128327110 (SH3RF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
Prok-RING_4
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
128327110
NCBI-ProteinID:
XP_053111355
LinkDB
All DBs
Position
5:complement(75659811..75771926)
Genome browser
AA seq
871 aa
AA seq
DB search
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVSSRNELRCPECRTLVDCNV
DELPSNILLVRLLDGIKQRPRKPGGVTSCTNSLRAQNSTIANCIPKDLQSSQSGQQQRVQ
ARSPPVRGVPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGVHGFFP
TNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLAD
KIGIFPISYVEFNTTAKQLIELDKPSGSTGDSGEGTSGASHSNSVQKHTDTKKNTKKRHS
FTSLTMSNKASQSSQNRHSMEISPPVLISSSNPTAAARISELTGLSCSAPSQVHISTTGL
IVTPPPSSPVTTGPSFTFPPEVTYQTAPGSVNPPLPPPPPLLSATIIAPTSAGLPSGVAQ
KSALGSTEQIAHLRSQPRPSVYVAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSM
HTSKIGVFPGNYVAPVTRAVTSASQAKVPVSTTGQTGRVVTMVNSSTTGGTLQKLQGNGV
AMNTSVVPTAVVSAAHIQTSPQTKVLMHMTGQMTVNQARNAVRTVAIHSQERPTATVTPI
QAQSSACLIPAAVIIPHHSVASQQLQPQLSNAAAYITAVNINRTNVPLACAATSLNCPVA
SPSLDGDVTGRIVTVHPGAPASPENTLAAGGTTVGKPDRDSKKEKKGLLKLLSGASTKRK
PRVSPPSSPTLEVEQAAAELALQGAVGPEVPSASSHGRVESCPMDNETSTAVLVQETTHR
KASSLDSSIPIAPPPRQPCSSLAPILNESRPVVCERYRVVVSYPPQSEAELELKEGDVVF
VHKKREDGWFKGTLQRNGKTGLFPGSFVESI
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtcagccttgttggatctgttggagtgtccagtctgcttagaacgccttgat
gcttctgcaaaagtcttgccttgtcaacatacattttgtaaaaggtgtctgctgggcatt
gtaagttcccgaaatgagcttcgatgtccagaatgcaggacgttagtagactgcaatgtt
gatgaacttcccagtaatatcttactggttcgactacttgatggcatcaagcagagaccc
cggaaacctggtggtgtgacgagctgcacaaattcattaagggcccagaatagcacaatt
gctaactgtattccaaaagacctgcaaagttctcaaagtggccagcagcagagagtacaa
gcacggagtcctcctgttaggggtgtacctcagttaccctgtgccaaagcattatataac
tatgaggggaaagagcctggagatcttaaattcagcaaaggtgacatcatcattctacgt
cgccaagttgatgaaaattggtatcatggagaagttaatggcgtccatggattttttcct
accaattttgtccagataattaaacctttacctcaacctccacctcagtgcaaagcactt
tatgactttgaagttaaagacaaggaagcagataaggattgtttgcccttctcaaaggat
gacattctgactgtgattcgtcgagtggacgaaaactgggctgaaggaatgttggctgac
aagataggaatattccctatttcatatgttgagtttaacacaacagcaaagcagctgata
gaactggacaaaccctcaggttctacaggagattctggagaaggcacatctggtgcatcc
catagcaattcagttcaaaagcacactgatacaaagaagaacaccaaaaaaaggcactcc
tttacctcccttaccatgtccaacaaggcctcacagtcttctcagaatcgtcactcaatg
gaaatcagccctcctgtcctcatcagctctagtaaccccaccgctgcagcacgtataagt
gaacttacaggcctttcctgcagtgcaccttctcaggttcatatcagtaccacagggtta
attgtgaccccaccacccagtagtccagtaacaacagggccttcatttactttcccacca
gaagtcacctaccaaactgctcctggtagtgtgaatcctcctctcccaccaccaccacct
ctgttatctgccacaataattgccccaacatctgctggactgccttcaggagtagcacaa
aaatctgcattgggatcaactgaacaaatagcgcatttgcgttcacagccaagaccaagt
gtgtatgttgctatttatccatacactcctagaaaagaagatgaactggaattgagaaaa
ggcgagatgttcttggtgtttgaacgatgtcaggatggctggtttaaaggcacctccatg
catacaagcaaaattggtgttttccctggcaattatgtggcaccagtcacaagggcagtg
acaagtgcctcccaagcaaaagtccctgtatctactactggacagacagggcgggtggtg
acgatggtcaactcttccactaccggaggaaccttgcagaaacttcagggaaatggtgtg
gcaatgaacaccagtgtggtaccaacagctgtggtctctgcagcacacatacaaactagt
ccacagaccaaggttcttatgcacatgactggccaaatgacagtcaaccaggctcggaat
gcggttagaacagttgcaatacacagccaagaaagacctacagccaccgtgacaccaatt
caggctcaaagttcagcatgccttattcctgctgctgtaattattccacaccattctgtt
gcctcccaacagcttcaacctcagctttcaaatgctgctgcttacatcacagctgtaaac
atcaatcggacaaatgtcccattggcttgtgccgcaacatcattaaactgtcctgttgct
tctccatctctggatggtgatgtaactgggagaattgtgactgttcatcctggagcacca
gcatctccggagaatacattagcagctggtgggactactgttggtaaaccagacagagat
agtaagaaagaaaaaaaagggctgctgaagttgctttcaggagcatctaccaagcgcaaa
cctagagtatcaccaccatcatctccaactttggaagttgagcaagcagctgcagagttg
gccttgcagggcgctgtaggaccagaagttccatcagcatccagtcatggaagagtggag
tcctgtcccatggacaatgaaacatctacagcagtactagtgcaggagactactcatcgg
aaagcaagttctttggattccagtattcctattgctcctcctccacgacagccctgctct
tcattggccccaatcctgaatgaatccaggcctgtggtctgtgaacgatacagggttgtg
gtatcctatcctcctcagagtgaagctgagcttgaacttaaagaaggagatgttgttttc
gtacataaaaagcgtgaagatggttggttcaaaggcacactgcaacgaaatggaaaaact
ggccttttccctggcagctttgtagaaagtatctga
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