KEGG   Hemicordylus capensis (graceful crag lizard): 128327204
Entry
128327204         CDS       T08891                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
hcg  Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hcg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128327204 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hcg03400]
    128327204 (TDP1)
DNA repair and recombination proteins [BR:hcg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     128327204 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 128327204
NCBI-ProteinID: XP_053111617
LinkDB
Position
1:complement(36522526..36616775)
AA seq 602 aa
MSQASEHGKWTVSSSEESADDEQVDREEPSSSSPQQAGREATAGPRYSCSEARKAAHKRK
ASPLKCHDGNSPQKLAPAQKKRPPQEGLGWCLSSSDEEDSLEGQTGEADGAARVKREDRC
CASKEVASNELPQSHKSAEPSDKVPDTWDLLNGGNSFRFFLTKVKGIKSEYNSGALHIKD
ILSPLLGTLVSSAQFNYCIDVEWLVKQYPKEFRDKPLLIVHGEKRESKAQLHEAAHPYQN
VRLCQAKLDIAFGTHHTKMMLLCYEEGLRVVIHTSNLINEDWYQKTQGIWLSPLYRRLPP
GADGSAGESHTNFKSDLINYLMSYNSPTLNEWVEVIKQHDLSETRVYLLGSSPGRYQGNE
KEKWGHLRLRKLLKEHTTRVPDQDLWPVIGQFSSIGSMGADQSKWLCSEFRDSLAALGNN
AKTLTNHEVPIHLVYPTVDNVRQSLEGYPAGGSLPYSIQTAQKQLWLHTYFHKWSAETSG
RSHAMPHIKTYMRVSSDFQRIAWFLVTSANLSKAAWGAFEKNGTQLMIRSYELGVLFLPS
EFGLDTGYFQLKENLLSDEPVSSFPVPYDLPPEKYGSKDRPWIWNIPYTRAPDTHGNMWV
PK
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgtcccaggcaagcgagcacgggaaatggacagtctccagcagcgaggagagcgcagat
gacgagcaagtggatcgcgaggagccttcgagctcttcgccgcagcaagctgggcgagag
gctactgctgggccgcgttactcttgttcagaggccaggaaagcggctcacaagagaaaa
gcgtcccctctgaaatgtcacgacggaaactcgccgcagaagttggcccctgctcaaaag
aagaggcctccccaagaaggtttagggtggtgtctttcaagtagcgatgaagaggacagt
ctcgagggccagaccggggaagcagatggagccgcccgagtcaaacgggaggaccgctgc
tgtgcttctaaggaggtggcaagtaatgaactcccgcagagccacaagtctgcagagccg
tcggacaaagtgccggacacttgggacttgttaaatggaggaaattctttcaggttcttt
ctcactaaagttaaaggaattaaatcagagtacaattctggagcccttcacataaaggat
attttgtctcctcttttggggactcttgtatcttctgctcagtttaactattgtatagat
gtggagtggcttgtcaagcagtatcccaaggagttcagggacaaaccattattaatagtc
catggagagaaaagagaatccaaagctcaactacatgaagctgcgcatccgtatcaaaat
gtccgcttgtgccaggctaaattggatattgcatttggaactcaccacacgaaaatgatg
ttgttgtgttatgaggaaggccttcgagtggtgatacatacatccaatcttatcaatgag
gattggtaccagaaaacacaaggcatatggttaagtcctctgtatcgaagactaccgcca
ggagctgatgggtctgctggtgaatctcataccaactttaagtcagacctaataaactat
ttgatgtcttataattctcctactctcaatgaatgggttgaagtaatcaagcaacatgat
ctttcagaaacaagagtatatctccttggatcaagtcctggtcgataccaaggcaatgaa
aaagagaaatggggtcatcttagactgagaaagcttttgaaagagcatacaacaagagtt
cctgatcaggatctttggcctgtaataggacagttctcaagtattggatcaatgggagct
gatcagtccaaatggctgtgttcagaatttagagacagtttggctgctctaggaaacaat
gcaaagactctaacaaatcatgaggtccccattcatctggtttacccaactgtggataat
gtgagacagtctctggaaggttatccagctgggggctctcttccatacagtattcaaact
gcacagaagcagctttggctgcacacctacttccataaatggtcagctgaaacttcaggt
cgtagccatgccatgcctcacattaagacttacatgagagtatcttcagacttccagagg
attgcatggtttcttgttacaagtgccaatctttctaaggctgcttggggagcttttgag
aaaaatggcacccagctgatgatccgctcatatgagctaggagttctcttcctgccttca
gaatttggcttggatacaggctatttccaattgaaagaaaacctgctttctgatgagcca
gtttcttcatttcctgtaccgtatgacttacccccagagaaatatggcagcaaagatcgc
ccatggatttggaatattccctacaccagagctcctgatacacatggaaatatgtgggtt
cctaaatga

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