Hemicordylus capensis (graceful crag lizard): 128327279
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Entry
128327279 CDS
T08891
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcg03041
]
128327279 (DDX17)
Enzymes [BR:
hcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128327279 (DDX17)
Spliceosome [BR:
hcg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128327279 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128327279
NCBI-ProteinID:
XP_053111864
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All DBs
Position
5:217299128..217323633
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AA seq
647 aa
AA seq
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MRGFGDRGRDRDRGGFGSPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEVARLT
PYEVDELRRKKEITVRGSDGCPKPVFAFHQCNFPQYVMDVLIDQHFTEPTPIQCQGFPLA
LSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVAD
DYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLD
EADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLHDYVQINVGNLELS
ANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPA
MCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHR
IGRTARSTNKGTAYTFFTPGNLKQARELVKVLEEANQAINPKLMQLVDHRGGGGGGGGRS
RYRTSNSSNNPNLMYQEECERRLRGVKDGRRDSNSFRDRDRGDSFANGANKAYAGAYGSP
NSAFGAQQGQYGYAQGTYGAAAYGASGYGAEYGAAGYAGASTATAGRNSQSTGQQQYAGL
GRSGQQPQPLMSQQFPQPPGTNVMGYMGQTAGYQYPPPPPPPPPSRK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcttcggagaccgaggccgcgaccgtgaccgcggcgggtttggcagtcccctt
cctcccaagaaatttggaaatccaggagagcgtcttcgtaagaagaaatgggacttgaat
gagttacctaagtttgagaagaatttctatgttgaacatccggaagtggccaggctcact
ccatatgaggttgatgagctgagaagaaaaaaagagattacagttagaggatcagatggc
tgccccaagcctgtatttgccttccaccagtgtaactttccgcaatatgtaatggatgtc
ttgatcgatcagcattttacagaaccaactccaattcagtgtcagggctttccattggcc
cttagtggccgagatatggtgggcattgcacagactggctctggtaaaacattggcatat
ttgcttcctgcaattgttcacatcaaccaccagccatatttggaaagaggagatggtccg
atttgcttggtactggctcctactcgagagctggcccagcaagtgcagcaggtagctgat
gattatggtaaatgttcaagattgaagagtacctgtatatatggaggagcacccaaaggt
ccccagatcagagatttggagagaggagttgagatttgcattgctacacctggacgtttg
atagatttcctggaagcagggaaaaccaaccttcgccgatgcacataccttgtattggat
gaagctgacagaatgttggatatgggttttgaacctcaaattcgtaagattgttgatcaa
attcggcctgacaggcagactctcatgtggagtgccacatggccaaaagaggtacgccaa
ttggctgaggacttcttgcatgattatgtccagatcaacgtggggaacctggagctgagt
gccaatcataacatcctgcaaatagtggatgtgtgcatggagagcgagaaagaccataaa
ttgatacaactaatggaagaaatcatggctgaaaaagagaacaagactattatctttgtg
gaaacaaaaagacgatgtgatgacctaactcgaaggatgcgtagagatggttggccagct
atgtgtattcatggagacaagagtcaaccagaaagagattgggtgcttaatgaattccgt
tctggaaaggcccctatcctcattgctacggatgttgcatctcgtgggctagatgtggaa
gatgtaaagtttgtgataaactacgactatccaaacagctcggaggattacgtgcacaga
atcggccgtactgcccgtagtaccaacaaaggcactgcctatacgttcttcacaccaggg
aatctgaaacaagctagagagctagtcaaagtgctagaggaagccaaccaggccatcaat
ccaaaactgatgcagcttgtggaccatagaggtggtggcgggggtggaggtggccgttct
cgttaccgtaccagcaattcatccaataaccctaatctgatgtaccaggaggagtgtgaa
cgcaggctgcggggagttaaagatggccgaagagactctaatagttttcgagaccgtgat
cgcggtgacagctttgccaatggagccaacaaggcctatgctggtgcatatgggagtcca
aattctgcctttggagcccagcagggccagtatggttatgcccagggaacctatggagct
gctgcttatggtgcaagtggctatggggcagaatatggtgctgctggctatgctggagcc
agcactgccaccgctgggagaaactcacaaagcactggtcagcagcagtatgcagggctg
ggtcgttcgggccagcagccacagcctctcatgtcgcaacagtttcctcagcctccaggc
actaacgtgatgggctatatgggacagactgccggctatcagtatccaccgcctcctcca
ccccctcccccttcacgcaagtga
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