Hemicordylus capensis (graceful crag lizard): 128328164
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Entry
128328164 CDS
T08891
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128328164
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcg02000
]
128328164
Transporters [BR:
hcg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128328164
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
128328164
NCBI-ProteinID:
XP_053113846
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Position
5:complement(235865694..235958999)
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AA seq
603 aa
AA seq
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MDYRVPGAVINGEIPAQPSGEKKKKEAVDQTLERDHWNNKLEYVLSVAGEIIGLGNVWRF
PYLCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQYTSQGGVTSWRRLCPLFEGIGYAS
QVIVVLLNFYYIIVLAWALFYLFSSFTIDLPWGSCDHEWNTGNCVEFQKTNSSLNVTTEN
ATSPVIEFWERRVLKISNGIEHMGGLRWELALCLLLAWIICYFCIWKGVKSTGKVVYFTA
TFPYLMLVVLLIRGVSLPGASQGILFYLYPDLTRLSDPQVWMDAGTQIFFSYAICLGCLT
ALGSYNKYHNNCYRDCIALCFLNSGTSFVAGFAIFSILGFMAQEQGVAISEVAESGPGLA
FIAYPRAVVMLPFSPLWACFFFIMVVLLGLDSQFVCVESLVTALVDMYPGIFRKKNRREI
LILLVSILSYLVGLVMITEGGMYVFQLFDYYAASGMCLLFVAIFETLCIGWVYGADRFYD
NIEDMIGYRPLPVIKYCWLFVTPAVCLATFFFSLIKYTPLTYNKKYVYPWWGDTVGWLLA
LSSMVCIPLWIIYKLSTIKGSLRERFHQLVCPDEDLPQKMCPGQQFPAPRTGLLMLTELD
SHC
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggattacagagtccccggggcagtgatcaatggagaaatacctgcccaaccttctggg
gaaaagaagaaaaaggaagcggtggaccaaacgttagaacgagaccactggaacaacaag
ctggagtatgtgctctctgtggcaggggagatcattggcttggggaacgtctggcggttc
ccttatctctgttacaagaatggtggtggtgccttcttcatcccctacctcatcttcctt
ttcacctgtggaattccagtgttcttcctggagacggcacttgggcagtataccagtcag
ggaggggtcacttcctggaggaggctttgccctctctttgaagggatcggttatgcttcc
caggtgattgtggtactccttaatttctattacattattgtcctggcttgggccttgttt
tacctcttcagctcattcaccatagatcttccgtggggcagctgtgaccatgaatggaac
acagggaactgcgtggaattccagaagacgaactcctctctaaatgtgacaactgaaaat
gccacttcccctgtcattgaattctgggagaggagagtcttaaaaatatccaatggcata
gaacatatgggaggcttgcgctgggagctggctctatgcctcttgctggcctggatcatc
tgctatttctgcatctggaaaggagtcaagtctacaggcaaggtggtgtattttactgct
acattcccatacctcatgctggtagttctactgattaggggagtttcactgcctggggca
tctcaagggatcctcttctacctttatccagacctcactcgactcagtgacccccaggtg
tggatggatgcaggcactcagatcttcttctcttatgccatttgcttggggtgcctgaca
gctctgggcagctacaataaatatcataacaactgttacagggactgcattgctttgtgt
tttttgaatagtggcacaagttttgtggctggctttgcaatcttttccatcctgggcttt
atggcacaagaacaaggagtggctatttcggaagtagcagagtcaggacctggcctggcg
ttcatagcatatcctcgagctgtcgtcatgctgcctttttccccattgtgggcctgcttc
ttcttcatcatggtcgttctgctgggattggacagccagtttgtctgtgtagagagtctg
gtgactgccctcgttgacatgtaccctggaattttccggaagaagaaccgccgagagatc
ctaattctgcttgtttccatcctctcatatcttgtgggactggtcatgatcacagagggt
gggatgtatgtcttccagctgtttgactactatgctgctagtggaatgtgcctgctcttt
gtcgccatttttgagacactgtgcattggctgggtatatggtgctgaccgtttctatgat
aacattgaagacatgattggctatcggccattgcctgtcatcaaatactgctggctgttt
gtcacgcctgctgtctgcctggcgacatttttcttttctctcattaaatacacgccactg
acgtacaacaagaaatacgtgtacccatggtggggagacacagtgggctggctcctggct
ctctcgtctatggtctgcatacctctctggattatctataaactctccaccattaagggc
tccctcagagagagattccatcagcttgtctgtccagatgaagacttgccccagaagatg
tgcccaggtcagcagtttcctgcccccaggactgggcttctgatgttgactgagctggat
tctcactgctag
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