Hemicordylus capensis (graceful crag lizard): 128328379
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Entry
128328379 CDS
T08891
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04010
MAPK signaling pathway
hcg04020
Calcium signaling pathway
hcg04144
Endocytosis
hcg04510
Focal adhesion
hcg04540
Gap junction
hcg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128328379 (PDGFRA)
04020 Calcium signaling pathway
128328379 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128328379 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128328379 (PDGFRA)
04540 Gap junction
128328379 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128328379 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hcg01001
]
128328379 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hcg04090
]
128328379 (PDGFRA)
Enzymes [BR:
hcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128328379 (PDGFRA)
Protein kinases [BR:
hcg01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
128328379 (PDGFRA)
CD molecules [BR:
hcg04090
]
Proteins
128328379 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
RIFIN
DUF6232
Motif
Other DBs
NCBI-GeneID:
128328379
NCBI-ProteinID:
XP_053114286
LinkDB
All DBs
Position
5:complement(96465270..96532290)
Genome browser
AA seq
1085 aa
AA seq
DB search
MGPSCGTFLILGCLLTGPWLASCQSLLPTILPNQDEMVVQLNSSFILKCSGDSEVSWQYP
IPEGNYTMDIRNEENNSGLFVTVLEVFGASASHTGLYTCYYNNTQEEDGEVEGKDIYVYV
PDPAVPFVPTQEDEFVVLTEEDESSIIPCRTSDPNAQVTLMNSEEKIIYAFYDNKQGFIG
NFSAGSYKCKTTVKTVEFLSGEFVIYIYKATSHLLVEIESRKTVYKTGETIVVACVVLDN
EVVDLQWNYPGKVKNKGIITLDDIKSPTQKLVYNLTIPDASVKDSGEYECAVVHVTKDFK
KTKRVVITVHDKGFIHLEPHFSPMEAVNLHEVKRFVADVHAYPAPKIFWLKDNVTLMENL
TEICTRSKQTHETRYQSVLKLIRAKEEDSGYYTLVAQNEDEIQRYTFSLLVQVPALIRDL
VDNHHGSGQTVKCLAEGTPLPDVEWLVCKDIKKCSNDTSWTLLMSNASDITMKTHLDEKN
MVESQVTFQKVEETLAVRCMARNDLGTVTRELKLVAPTFRSQLTVAAAVLVLLVIVVILL
IVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILGSG
AFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLG
ACTKSGPIYIITEYCFHGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGMNSADESTRSYVI
LSFENNGEYMDMKQAETTQYVPMLERKDRSKYSDIQRSLYDRPASYKKKSVSESDVKNLL
SDDNAEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARD
IMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVD
STFYNKIKSGYRMAKPDHATSEVYDIMVKCWNSEPEKRPSFYLLSEIVENLLPGEYKKSY
ERIHLDFLKSDHPAVTRMRADCDNPYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIPLP
DIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFVKREDETIDDIDIIDDIGMDSSELV
EDSFL
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgggtccttcctgtgggacattcctgatcttgggatgcctcttgacaggaccatggcta
gcctcctgccagtctttgttgcccacaattcttccaaaccaagatgaaatggttgtgcag
ctgaattcctccttcatcttgaaatgctctggagacagtgaagtgagctggcaataccca
attcctgagggcaactatactatggacatcagaaatgaagaaaacaacagtggtcttttt
gtgactgtgcttgaagtgtttggcgcttcagcttctcacactggattgtacacttgttac
tacaataacactcaagaggaagatggtgaggtggaagggaaggatatatatgtctatgta
ccagatccagctgttccttttgttcctactcaagaagatgagtttgttgtcctcactgaa
gaagacgagtcctccatcatcccttgccgcacaagtgaccctaatgctcaagtaacgtta
atgaacagtgaagagaaaataatttatgccttttatgacaacaagcagggcttcattgga
aacttctctgcaggctcctataaatgcaaaaccaccgttaagacagtagagtttctgtct
ggtgaatttgttatctatatttacaaagctacttcacatcttcttgttgagattgagtcc
cgcaagactgtatataaaacaggagaaaccattgttgtagcttgtgtggtcttggataat
gaggtggtggacttacagtggaattatccagggaaagtgaagaacaaaggtataatcaca
ctggatgacatcaaatctccaacccagaagctggtttacaatttgaccattccagatgct
tcagtgaaggactccggagagtatgaatgtgctgttgtacatgtgaccaaagattttaag
aaaaccaaaagagttgtcatcactgttcatgataaagggttcattcatctggaaccccat
tttagccccatggaagctgtcaatctacatgaagttaaacgctttgtagctgatgtgcat
gcatacccagctccaaaaatattttggctgaaggacaatgtgactctgatggagaatctt
acagaaatttgcactcgctccaagcagacccatgagacaaggtaccagagtgtattaaaa
ttaatacgggccaaggaagaagacagtgggtactatactcttgtagcacagaatgaagat
gaaatccaaagatacactttctctctgcttgtacaagttccagctctaattcgagacctg
gtggataatcatcatggttctgggcagacagtaaaatgtttggcagaagggacacccctc
cctgatgtggaatggctggtttgcaaggacattaaaaaatgtagcaatgatacctcttgg
acccttctgatgagcaatgcctcagatattactatgaagactcatttggatgagaaaaac
atggtggaaagccaggtgacctttcaaaaggtggaggaaacactggctgttcgatgcatg
gcaaggaatgatcttggcactgtcacacgggaactgaagcttgtggctcctacttttaga
tcacaactgactgtggctgctgcagtccttgtgctgctggtgattgtagtcattttgctg
attgtcctggtcataatatggaaacagaaaccaagatatgagatcaggtggagagtcatt
gagtccatcagccctgatggccatgaatatatttatgtggaccccatgcagcttccctat
gactcaagatgggagtttcctagagatggattagtgctgggccgaatccttggctctgga
gcttttgggaaagtagttgaaggaacagcatatggattaagccggtcacaaccagtgatg
aaagtggctgtgaaaatgctgaagcccacagcaagatccagtgaaaagcaggctctcatg
tctgaattaaagataatgactcatcttggacctcacttgaacatagtgaacctgctagga
gcatgtacaaaatcaggtccaatttatatcattacggaatactgctttcatggtgacttg
gtaaactacctccataaaaacagggataattttttgagtcgacatccagaaaagcccaag
aaggatttggatatctttgggatgaactcagctgatgaaagtactaggagctacgtcatc
ctatcctttgaaaataatggtgaatacatggatatgaaacaagcagaaaccactcagtat
gtgccaatgctagaaaggaaagacagatcaaaatattccgatatccaaaggtctttgtat
gatcggcctgcatcatataagaagaaatctgtgtcagaatcggatgtcaagaacctcctt
tctgatgataatgctgaaggtctgagtttgttagacctactgagcttcacttaccaagtt
gcacggggaatggaattcttagcttctaaaaattgtgtacatcgtgatctggcagctcgt
aatgttcttctggctcaagggaaaatagtgaagatctgtgactttggtctggctagagac
atcatgcatgattcaaattatgtttccaagggcagtacctttctcccagtgaaatggatg
gcacccgaaagcatttttgacaacctgtatacaaccttaagtgatgtctggtcttatggc
attctgctgtgggaaatattttctcttggtggcactccataccctggcatgatggttgat
tctacattctataacaaaattaagagtggttatcggatggcaaaacctgaccatgctacc
agtgaggtgtatgacatcatggtgaaatgctggaacagtgaacctgagaaaagaccttct
ttttatcttttgagtgaaattgtggaaaatctgttacctggagaatacaaaaagagctat
gagagaattcacttggatttcctgaagagtgaccatcctgctgtcacacgcatgcgagca
gactgtgacaatccctacattggcgtcacttacaagaatgaagacaagctgaaagacagg
gagagtggatttgatgaacaaagacttagcgctgacagtggctatataatccccctgcca
gatattgatcctgtttcagaagatgaacttggcaaaagaaacaggcacagttcccagacg
tctgaagaaagtgccattgaaactggttccagcagttcaacatttgtcaagcgagaagat
gagaccattgacgacattgacattattgacgacattggaatggattcctcagaactggtt
gaagacagcttcctgtaa
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