Hemicordylus capensis (graceful crag lizard): 128328494
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Entry
128328494 CDS
T08891
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128328494 (CAPRIN2)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
128328494 (CAPRIN2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
C1q
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
128328494
NCBI-ProteinID:
XP_053114505
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Position
5:234692541..234754750
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AA seq
1283 aa
AA seq
DB search
MLKCCVSFSDYYVEGSSFVSKLGFLEVSIALGRTYSTERKAALTVSMVQLSQSPLRRPLP
SCHSEEGDEKNMKPAKQQVAQGPHGDNQPPLSPLQATLSSAATASQAYETYIDNGLICLK
HKIRNIEKKKLKLEDYKDRLKKGESLNQDQLEAVEKYDEVMHNLEFAKELQKTFSGLSQD
LLKAQRKAQRRDTIMKLEAEKKKLCTVLQVQYVLQNFIQEHVQKDFRGGLNGAIYMPSKE
LDYLIKFAKLTCAGRNESLSVEDQMEQSSLYFWDLLEGNEKAVVGTTYKHLKDLLSKLLD
SGYFENIPTPCTVPEKEEGKEEIPRRPEKTRQLSKPESVKEPDEPQLEHIQSEIQPQEFL
NRHYLSEVDSSVKKPEELKPWEMEHTKMNEPPKSWEALVDMEEQEQKRKQESMKPLQSMR
QQGKKPELSKPWEVQLKEDDHKQEVLKPWITRVREQQDSPKPWVTKVKEEQEQKQDVPKS
WITKAKEEVERKQELPKTWVAQTRVETIQKTETVKPWSTCVREETEQKKQDPAKPWAARI
KEEMEQKTPLPKTWGTSEESQQTLQLPLQNPPKIWGAANLVPKEQTGPKKPDTEPKERRE
RRQKLESDVKQDGKTDGVSGQGVDAVRKKESLQSVGESCKLPRSLQNIMQVPKPVYQPAA
EFCSTSSLPKDPILRREKLQDLMTQIQGTYNFMQESLLDFDKPSQSAICLPQATSVDSAA
SDEQKLSSQNDLSEPPVQVSASPMTFHGSNTSLASNNTLSGSETELGTPQTPQISVPLSQ
ESENFGSSQSLYQASQCISEPLMPQKSDTAQAPIPPSESQIPLAPSSTAMSPVPQGKVFQ
SPPASSSSVSMKAAPFQAMQTVFKVNAPLPPRREDIKDNIPHSTAYNQNFSTASTQTPPH
CKSQSTQNAEQTTFSQESLPNAANYQAEGAVPVSNGSLTFYAAQTTTLPRPPQPFVTSRG
SVRGPLRGARSVTNSYRSPSGYKAGFEAYRGSPSISNGSYSQLPPLGRDYPPVQYPQRDM
NYQQNYKRGGINSGRGNSRGYRREKRQEENCSSGRAQGRTRGREYARRRELRKMERNGKE
AESESNLVAAKMHQFRWSDSSQVSSPERDSEAFNSGDSGQGDSRSITPVDMPVMSQAATI
LPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDIQLGRFNCPVNGT
YVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAVLQLFQGDQIWLRL
HRGAIYGSSWKYSTFSGYLLYQD
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagtgctgtgtaagttttagtgactattatgtagagggcagtagctttgtttcc
aagctggggtttctggaagtctctattgcattggggcgtacatattccacagaaagaaaa
gcagccctaaccgtttcaatggtgcagctttcacagtccccactccgccgccctttgcct
tcatgccactctgaggaaggggatgagaagaacatgaaacctgctaaacagcaggtggcc
cagggtcctcatggggataaccagcctcccttgagtcctctgcaggcaactttgagttct
gctgcaactgcttcccaggcgtatgagacttacattgacaatgggcttatctgcctaaaa
cacaagatcagaaacattgagaaaaagaagctcaaactagaagactacaaagatcgcctg
aaaaagggggagtccctcaatcaggatcagctggaagcagttgaaaaatatgatgaagtg
atgcataatttggagtttgctaaagagcttcagaagacattttctggacttagtcaagat
ctgctgaaagcacagaggaaggctcagagaagagataccataatgaaacttgaagcagaa
aagaaaaagctttgcacggtactgcaggtccagtatgtgctgcagaacttcattcaagag
catgtgcagaaagacttcagaggtggcttgaatggtgcaatatacatgccttctaaagaa
ctagattacctcattaaatttgcaaagctgacttgtgcaggcagaaatgagagccttagt
gttgaagaccaaatggaacaatcatcactctacttctgggatctgttggaaggcaatgaa
aaagcagttgttgggacgacttataagcacctgaaggatttgttgtctaaactactagat
tctggttactttgaaaacattcctacaccttgcactgttccagaaaaggaggaagggaag
gaagaaatacctagaaggccagaaaaaacaaggcagctgtcaaaaccagagtctgtcaaa
gagccagatgagcctcagttggagcatattcagtctgagatacagccacaagagtttctt
aataggcactacttgtctgaagttgactcttctgtcaagaaacctgaagaattgaaacct
tgggaaatggaacatacaaaaatgaatgaacctccaaagtcctgggaagctcttgttgac
atggaagagcaggagcaaaagcggaaacaagaatctatgaagcctctgcaatccatgagg
cagcagggaaagaagccagaactttcaaagccttgggaagtgcaacttaaagaagatgat
cacaagcaagaagttctaaagccttggataacacgggttagggaacagcaggactccccc
aaaccctgggtaaccaaagttaaggaagagcaggaacaaaaacaagatgttccaaaatct
tggataaccaaagctaaggaagaagtggaacgaaagcaggagttgcccaaaacatgggtt
gctcaaacaagggtggaaactatacagaagacagaaactgtgaagccttggagtacatgt
gttagagaagagacagagcaaaagaaacaggaccctgcaaagccctgggcagcacgtatc
aaggaggagatggagcaaaaaactccactccccaaaacgtggggaacatctgaggaatca
cagcaaactcttcaactgcctttacagaatcctccaaagatctggggagcagcaaatctt
gtgccaaaggagcagactgggccaaagaagcctgatacagaacccaaagaaagacgagag
cgcaggcagaagcttgaatctgatgtgaaacaagatggcaaaacagatggagtaagtgga
caaggcgttgatgctgtaaggaaaaaagagagtcttcagtcagttggagaatcttgtaaa
ctacctaggagtctccaaaacatcatgcaggtgcctaaacctgtgtatcagccagctgca
gagttttgctctacttctagtcttccaaaggatccaatactaagaagggaaaagctacag
gatctgatgactcaaatacaagggacctacaatttcatgcaagagtctcttctggatttt
gataagccttctcaaagtgccatttgtttgcctcaagcaacgtcggtggattctgcagct
tctgatgaacaaaagctttccagtcaaaatgacttatctgagccaccagtacaggtttct
gcttctcctatgacctttcatggctcaaacacatcattggcttctaacaatacactatct
ggttctgaaaccgaacttgggacaccacagacaccacagatatctgttccactttctcaa
gagtctgagaattttggttcatctcaatctttgtatcaggcaagccaatgcatttctgag
cccttaatgccccaaaagagtgacactgcccaggcacctattcctccaagtgaatcacag
ataccattggcaccatctagtactgccatgtcaccagtaccccagggaaaagtgttccag
tctcctccagcaagtagcagttcagttagcatgaaagcagctccctttcaggctatgcag
actgtgttcaaagtgaatgcacctttgccacctcgtagagaggatataaaagacaatatt
ccacattccacagcatataatcagaacttttctacagcaagtacacagactccacctcac
tgtaaatcacagtctactcaaaatgctgaacaaactactttttctcaagagtctttgcca
aatgcagctaattaccaggctgagggagctgttcctgtaagcaatggtagcctcaccttt
tatgcagcacagacaaccactctccctagaccacctcaaccttttgtcacaagccgtgga
tcagttagaggccccctcagaggtgcaagatcagtaaccaactcatatcgctctcccagt
ggctataaagcaggttttgaagcttacaggggatcaccttccatctcaaatggcagttac
agccagttgccaccacttggcagagattaccctccagtacaatatcctcagagggatatg
aattaccaacagaactataagcgagggggtattaatagtggtcgaggaaactcaagaggt
tacaggcgagaaaagagacaggaagagaattgttcatcaggtagagctcaaggtagaact
cgtggtagagaatacgccagaagaagggaattgaggaaaatggagagaaatgggaaagaa
gcagagtctgaaagcaatcttgtagctgccaagatgcaccagttcagatggagcgattca
tctcaggtgagcagcccagaacgtgacagtgaggcctttaacagtggggactcggggcag
ggtgactcccgcagcatcactcctgttgatatgccagtgatgagccaagcagccaccata
ctacctgtacacgtctatcccctcccacagcaaatgagagttgccttttctgctgctaga
acttctaacttggctcctggaactctagatcaacctattgtgtttgaccttctgttaaac
aaccttggtgaaacctttgatattcaacttggtaggttcaattgtccagtgaatggtacc
tatgtgtttatttttcatatgctgaagttggctgtgaatgttccactgtatgtgaacctc
atgaaaaatgaagaggttctagtatcggcttatgccaatgatggagctccagatcatgag
actgctagtaaccatgcagtcctccagctttttcaaggagaccagatttggctgcgtctg
catagaggagcaatttatggaagtagttggaaatactctaccttctcaggatatctactg
tatcaagactga
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