Hemicordylus capensis (graceful crag lizard): 128329239
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Entry
128329239 CDS
T08891
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128329239 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128329239 (SMARCD2)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128329239 (SMARCD2)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128329239 (SMARCD2)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128329239 (SMARCD2)
PBAF complex
128329239 (SMARCD2)
GBAF(ncBAF) complex
128329239 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
128329239
NCBI-ProteinID:
XP_053116032
LinkDB
All DBs
Position
6:complement(45197115..45237274)
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AA seq
533 aa
AA seq
DB search
MAGRGGFPLTPPPTAAASVGAAVPPPPPGPGGGLLRGPSPAGATAYRPVGHGAQFQRPGM
LPGGRMPMTGLQVGSLSGPPYGTASPLRPGMPQSMMDPFRKRLLAPQTQPPPLLTQRRGL
KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLR
IYISNTFTPGKEESEGGERIASWELRVEGKLLDDPNKQKRKFSSFFKSLVIELDKELYGP
DNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQT
RASIMQALWLYIKHNKLQDSHEKEYINCNRYFRQIFGCIRMRFSEIPMKLAGLLQHPDPI
VINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSSFLASTTNQQEIASLDVKIHETIESI
NQLKTQRDFMLSFSNNPQDFIQEWIRSQQRDLKTWLGTLKRRDVQSSTSNHGCRRLLGDT
SLPRFSSAGKNWNKSLAFALPSGATSVKPLAPCGTLEWTDGPQSSAFNRLMEF
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggccggccgtggtgggttccccctcaccccgccgcccactgccgcggcctcggtgggg
gccgcggtccctcctcctcctcctggacctggaggcgggctcttgcggggacccagccca
gccggggccaccgcataccggcccgtggggcatggagctcagttccaacgcccagggatg
ctgcctggtggccggatgcccatgacaggattgcaggtgggctccctgtctggacctcca
tatggaacagcttctccactaagacctggaatgccacagtctatgatggatcccttccgg
aagcgtctgcttgctccacagacccagccgcctccgttgctaacccaaagacgagggctg
aagaggaggaagatggccgacaaggtcctaccacagaggatccgtgagttagtcccagag
tctcaagcctacatggatttactggcatttgaacgcaagctggatcagaccattgcccgc
aagaggatggagatccaggaggcaatcaagaaacctttgacgcaaaagcggaaactgcgc
atttacatctccaacacctttacacctggaaaggaagaatctgaaggcggcgagcgcata
gcctcatgggaacttcgtgtggagggcaaactcttagatgatccaaataagcagaagcga
aagttctcttcctttttcaagagcttggtcattgagctggataaagagttgtatggccca
gacaatcacctggtggaatggcaccgaatgcccacgacccaagagacagatggcttccag
gtcaagcgcccaggcgatgtcaatgtgaaatgcaccctgctgctcatgctggaccaccag
cctccccagtacaaactggacccccgcctggctcgcctgctgggtgttcacacacagact
cgggcaagcatcatgcaggccctctggctctacatcaaacacaacaagctccaggacagt
catgagaaggagtacatcaactgcaatcgctattttcgccagatctttggctgcatccgc
atgcgattctctgagatccccatgaagctggcagggctcctgcaacacccagatcccatt
gtcatcaaccatgtgatcagtgtggatcctaatgaccagaagaagactgcctgctatgac
attgatgtagaagtggatgaccctttgaaggcccaaatgagcagcttcctggcttccacc
accaaccagcaagaaattgcctccctggatgtcaagatccatgaaaccattgaatctatc
aaccagctcaagacacagcgagatttcatgttgagcttcagcaacaatccccaggacttc
attcaggagtggatcagatctcagcagagggacttgaagacgtggttgggaaccctgaag
aggagagacgtgcagagttctacgagcaaccatggatgcaggaggctgttgggagacaca
tctttgccaaggttcagcagcgcaggcaagaactggaacaagtccttggcgttcgcctta
cctagtggtgccacgtccgtcaagcctcttgcaccttgtggtactttggagtggactgat
ggtcctcaatcctctgcctttaacaggctgatggagttctga
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