Hemicordylus capensis (graceful crag lizard): 128329330
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Entry
128329330 CDS
T08891
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128329330 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128329330 (EXOSC7)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128329330 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
128329330 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128329330
NCBI-ProteinID:
XP_053116304
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Position
6:98911499..98936390
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AA seq
290 aa
AA seq
DB search
MASVVLSEAEKVYIIHGVQEDLRVDGRGCEDYRCTEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLDKPNEGYLEFFVDCSANAAPEFEGRGGEELGTEIANTLYRIFNNKSSID
LKLLCINPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEGGREIE
LSDDPFDCIRLNVDNVPCMVTLSKIGCRHVVDATLQEEACSLASLLISVTSSGALTCMKK
VGKGSLDPESIFEMMETGKRVGKLLHASLQTILDKEESLGTARKKVGFLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagtagtgctgagtgaagcagagaaagtgtacatcatccacggtgtccaggag
gatcttcgcgttgatggccgtggctgtgaagattatagatgtactgaagtagaaacagat
gtagtatctaatacaagtggatctgctagagtaaaactggggcacacagacatcctcgtt
ggagtcaaagcagaaatgggaacaccaaagctggataaaccaaatgaaggctacttggaa
ttctttgttgactgttcagcaaatgctgctcctgaatttgaaggccgaggtggagaggaa
cttggcactgaaatagcaaataccctttacagaatatttaacaacaagagcagcatagat
ttgaagttgctctgtatcaatcccagagagcattgctgggtgctttatgttgacgtcttg
ttattggagtgtggtggcaacttatttgatgccatttctattgcagtgaaggcagcacta
tttaataccagaatacccagagtacgtgttttggaggatgaaggaggacgggaaattgag
ctttctgatgatccctttgactgcattcggcttaatgtagataatgtgccctgcatggtc
acactgagcaagattggctgtaggcatgtagtggatgccacccttcaagaggaagcatgt
tctttggctagcctcctcatttctgtgaccagtagtggtgccctaacctgtatgaagaaa
gtgggaaaagggagccttgacccagagagtatatttgagatgatggagacaggaaagaga
gtaggcaagcttttgcacgcctccctgcaaactattttagacaaagaagagagccttgga
acagcacggaaaaaagttggattcctgggatga
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