Hemicordylus capensis (graceful crag lizard): 128329398
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Entry
128329398 CDS
T08891
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SAM_2
SH3_2
SH3_1
PDZ_6
PDZ
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
128329398
NCBI-ProteinID:
XP_053116490
LinkDB
All DBs
Position
6:35173857..35317042
Genome browser
AA seq
1845 aa
AA seq
DB search
MPQSPETSAEEEEHLSQCPEGESGSESSHEGPSPPASPANPAHNHSMSVPEDAHFSMMVF
RIGIPDLHQTKCLRFNPDAAIWVAKQQILCTLNESLKDVLNYGLFQPATNGRDAKFLDEE
RLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGLKKFLEYVQHGAAEKV
ARLLDKGLDPNYHDSDSGETPLTLAAQLDGTVDVIRLLCLGGAHIDFRARDGATALHKAV
CSHHYAALMALLDLGGSPNYKDRRGLTPLYHTAMVGGDPRCCELLLYNRAHIGTTDENGW
QEIHQACQHGNSQHLEHLLFYGAEPGAQNASGNTALHICALYNKESCARILLYRGANKEI
KNNHGQTAFQVAVIAGNFELGELIKSHRDSDVVPFQETPQYASRRWDGSQSLTVPHTLLR
ANSDTSMNLPDWMLYAPPTSSSTTVAVQGQKITTGTLRSSSSPRGARSRSPSRGRHTDEA
KKQRGRPSSSGYQKEAAGGSTLSSRGVKRKLYSAVPGRTFMAVKPYQAQAEGELSISKGE
KIKVLSVGEGGFWEGQVKGRVGWFPSDCVEEVPNKSQDGKQESRSDKAKRLFRHYTVGSY
DSFDAPSDYIIKEKTVLLQKKDNEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEG
GVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNNLMVKVVMVTRNPEMEEAMRK
KAAPQQTRRLPPPAISLRSKSMTSELEEMVEKVSPWKKKADYEPALGTDKKRTVYQMALN
KLDEILAAAQQTISVGDGCGSGGLPSLGKSRGTVKNYFSSEPGFEQHHLGQPSYERPSYL
PTSHPPGMMLRQKSIGAAEDEKPYLAPPPMKFSRSLSVPGSDDIPPPPTTSPPDPPYSTS
PSASGRVTPSARSTFNPSAEAKLYSASLHQEPLYEPSPRARDKMSLYRQESEQGAEGSTA
RGWRGHTPDLRYYNLPPRATNTAMYVPTKPMRRKGPLVKQTKVEDEQRQQQSGAATSQVQ
PSASQAPSTIPPEKSSIPIPTIIIKAPSTSSSGRSSQGSSMEAESQPEPAVPVPSLQLHN
SMDFTSQFGAALVGAARRDREWYSEARRKSALFLSTEQPDDESQQAPVPRLRHSKSIDEG
MFSSEPYIQLNMAPGFGASSSSGSTSAYLQSRAAKAYGASTTSAFTSVCSSFLPQLQPHS
TPLIHPLTGKILDPGSPLGLALVARERALKESQSQQESRDERHSRPSSPRFGEVPKTTES
PGNSILRLWGTPEQQQHQRPASPRKEQESPRHHSPEQQPPASAKAAPWEKRPEEGEKLEL
HVRFVENCRPTEEEEGSHEGGKVEVAAVPPERATEENGLPLLVLPPPAPSIDVDDEFVFT
EPLPPPLEFSNSFDKPESPPKAANELPPAMAPPAAPPAPATLDSTASSLTSYDSEVATLT
QAGAAETKEAPHVNFSSVVSSIAIPAAEAPEAVTDSGIEEVDSRSSSDHHLETISSVSTL
SSMSGEGTELLDTYITYLDGQAFGGSGGGSGSGGGAEKSPLQTKLRSRPFPGRLPVATPT
SSTISVSACTENMFALTPAPPYHQQPAANEPGKELQRKSPTLPWEEPKASPMSTMKASII
SELSTKLQQMGGVSWSRPPDAVASFGSERPSSLQRQRLPDETSPSLISSKPVSSLFHNWP
KSPQGKHPKSVEFDIRPALRRAPSPAALPSEHKISPAPRPSSLPILPSVPIYTGVFDLRG
SPTSGGEHPFPGFPSGSRSLSPTHFLPPATDKPFGSKPLPFWTKYDVADWLEYLKLGEHR
DRFLDNEIDGSHLPSLTKEDFIDLGVTRVGHRMNIARALKFFLER
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgccccagagccccgaaacaagtgcggaggaggaggagcacctctcccagtgccccgag
ggggaatcgggctcggagagctcccacgaggggcccagccccccggccagccctgctaac
cctgcccacaatcactccatgtcggtacctgaggacgcccacttcagtatgatggtcttc
cgaattggtattcccgaccttcaccagacgaaatgcctgcgtttcaatcccgacgcagcc
atctgggtggcaaagcaacagattttgtgtacactcaatgaaagcctcaaggacgtgttg
aactatgggctcttccagccagccaccaatgggagggatgccaagttcctggatgaagag
cgcctcttgcgcgaatacccacagagttttgagaaaggagtaccttacctagagttccgc
tacaagacccgtgtttacaagcaaacaaacctggacgagaagcagctggcaaagctccac
acgaagacggggctgaagaagttcctggagtacgtgcaacatggagcagctgagaaagtg
gcgcgactcctggacaaagggctggaccccaactaccacgattcggactctggcgagacc
cctttgacgctggctgcccagttggacggaaccgtcgacgtgatccggctgctgtgcctg
ggcggagcccacatagacttccgggcaagggacggagcgacagcgctgcacaaggctgtc
tgctcccaccactacgcggccctgatggcactcttggacctgggaggctcaccaaattat
aaggaccgccgtgggctgactccgctctaccacacagccatggttgggggtgacccacgc
tgctgtgagctgctgctctataaccgggcccacattggcacgactgatgagaatggttgg
caggagatacaccaggcctgccagcacggaaactcccagcacctggagcacctgctgttc
tatggcgctgagccaggggcacagaacgcatctgggaatacagcgctacacatctgcgcg
ctctacaacaaggagagctgtgcccgcatcctgctataccggggagcaaacaaagagatc
aagaacaaccatggccagacggcattccaggttgcagtcattgcagggaattttgagctg
ggagagctgatcaagagccaccgggactcagatgtggtccccttccaggagaccccacaa
tatgccagccgtcgctgggatgggtcccagagcctgacggtgccgcataccttgttgcga
gccaacagtgacaccagcatgaaccttccagactggatgctttatgcccctccgacctcc
tcatctaccacggtggctgtgcagggccagaagatcaccacaggaaccctgcggagttcc
agcagcccccgtggtgctcgcagccgctctccatcacgtggccgccacaccgatgaggcc
aaaaaacagcgcggccgacccagctccagtggctaccagaaggaagcagctggaggcagc
acgctgagtagccggggagtgaagcggaaactctattcggctgtgcctggccgcacattc
atggctgtgaaaccataccaggcccaggccgagggtgagctctccatcagcaagggcgag
aagatcaaggtgctaagtgttggggaaggcggcttctgggaggggcaggtaaagggccgt
gtgggctggttcccctcagactgtgtggaggaagtgcccaacaagtcacaggatgggaag
caagagagccgcagtgacaaagccaagagactcttcaggcactatacagttggctcctac
gacagctttgatgccccaagtgactacatcattaaagagaagacggtgctgctgcagaag
aaggacaacgaaggatttggctttgtgctgagaggggccaaggcgcagacccccattgag
gagttcacacccacacctgccttccctgccttacagtatctggagtcagtggatgaagga
ggcgtggcttggcgagctggcctccgcatgggagatttcctcattgaggtcaatggacag
aatgtggtgaaagttggtcatcggcaggttgtcaacatgattcggcagggcggcaacaac
ctgatggtgaaagttgtcatggtaacacggaacccagaaatggaggaggccatgaggaag
aaagctgcaccacagcagacaagacgactgccccctccagccatctccttgcgttccaaa
tccatgacatctgagctggaagaaatggtggaaaaagtctccccctggaagaagaaagca
gattatgagccagcgctggggaccgataagaagcggactgtctatcagatggctttgaat
aaattggatgagatcctggcagcagctcaacagactatcagcgtaggtgatgggtgtgga
agtggaggtctcccttccctgggaaagtcccggggcactgtcaagaactatttctcatct
gagcctggttttgagcagcaccatcttggccagcccagttacgagcgcccatcataccta
ccgacgagtcatcccccaggcatgatgctccgccagaaatccattggagcggctgaagat
gagaagccctacctcgctccccctcccatgaagttcagccgcagcctttcagtccctggt
tccgatgacattcccccacctcccaccacttccccacctgaccccccgtacagcacctct
ccctcagcatctggacgtgttaccccctcagcccgctcaaccttcaaccccagcgctgag
gccaagttatattcggcttctctgcaccaggagccgctgtacgagccatccccccgtgcc
cgtgacaagatgtctctgtatcgccaagagtctgagcagggggccgaggggtccacggcc
cggggctggcggggacacacccccgacctgcgctactacaacctccccccgcgggccacc
aacactgctatgtacgttcccactaagcctatgcgccggaaggggccgctggtcaagcag
accaaagtggaggatgaacagcgtcagcagcagagtggtgccgccacctcccaggtacag
ccttcggcttcacaggccccgtcaaccatcccacctgagaagagctctatccccatcccc
accatcataatcaaagctccttcgaccagcagcagcgggcgcagcagccaagggagcagc
atggaggcggagagccaaccagagccagccgtgcctgtcccatccctccagctccacaat
agtatggatttcaccagccaatttggggctgcattggttggggctgcccgacgcgaccgc
gagtggtacagcgaggcccgtcgcaagtccgccctcttcctttccaccgaacagccggac
gatgagtcccagcaggcacctgtgccccgtctccgccactccaaatccattgatgaaggc
atgttctccagcgagccatatatccagctcaacatggcacccggctttggcgctagcagt
agtagcggaagcacctctgcttatctccagtcacgggccgctaaagcgtacggagccagc
accaccagcgccttcacctctgtgtgctccagtttcctgccacaacttcagccccattca
acacctctcattcacccactaactggcaagattttggatcctggatcccccctgggattg
gcattagtggcacgggagcgggccttgaaggagtcccagtcccagcaggagagccgagac
gagaggcactcgcgcccatcctcaccgcggtttggagaggttcctaaaaccacggagtct
cctggcaactccattctgcgcctctgggggacgccagagcagcagcagcaccagcggcct
gcatcgccacggaaggagcaggagagcccccggcatcactcacctgagcagcagccgcca
gcctcagccaaagccgcgccttgggaaaaacggccggaggaaggagaaaagctggagttg
cacgtgcgcttcgtggagaactgccgcccgacggaggaggaggaaggtagtcacgagggc
gggaaagtcgaggtcgctgcagtgccaccagagcgtgctactgaggaaaacgggcttccg
ttgttagtgttgccaccacctgccccttccattgatgtcgatgatgagtttgtcttcaca
gagcctctcccaccaccccttgaattttccaatagctttgacaagcctgagtctccccct
aaagctgccaatgaactgcccccagcaatggccccgccagccgctccccccgcccctgcc
accttagactccactgcctccagcttgacctcctatgacagtgaggtggccaccctgacc
caagccggagctgcagagaccaaggaagcccctcacgtcaacttctcttctgttgtctca
tccattgccatccctgcagcagaggcccccgaagccgtgaccgactcggggatcgaggag
gtggacagtcggagcagcagtgaccaccatttggagacgatcagcagcgtctccacgctg
tccagcatgtctggggaaggcacagaactcttggacacctacatcacctatctggatggg
caggcttttgggggaagtggcggaggaagtggcagcgggggtggggcggagaagagcccg
ctccagaccaagctccgctcccggccgttcccaggccgcttgccggtggctacccccacc
agctccaccatctcagtttcagcatgtacagagaacatgtttgccctcacgcccgcccca
ccctaccaccagcagccagcagccaatgagcccggcaaagagctgcaacggaaatctccg
acgctgccatgggaggagcccaaggcctcgcccatgtccaccatgaaggccagcatcatc
agcgagctgagcaccaagctacagcagatgggtggtgtgtcgtggtcacggccgcctgac
gcagtggcttccttcggttctgagaggcccagctctctgcagaggcaaaggctcccagac
gagacatccccatcactgatctcctccaagcccgtaagcagccttttccacaactggcct
aagtccccccagggcaagcaccccaaaagcgtggagtttgacatccgcccggccctgcga
cgtgccccaagcccagctgccctgcccagtgagcacaagattagccccgcccctaggccg
tcctcccttcccatcctgccttctgtgcccatatacaccggcgtcttcgatctccgtggc
tcgcccacttctgggggcgagcaccctttccccggcttcccctcgggcagccgctccctc
tctccgacccacttcctgccgccagccacggacaagccgtttggctccaagccgctgcct
ttctggaccaagtacgacgtggccgattggctggagtacctgaagctgggggagcaccgc
gaccggttcctggacaatgaaattgacggctcccacctgccgtccctcaccaaggaagat
ttcattgacctgggcgtgacgcgagttgggcaccgcatgaacatcgcccgtgccctcaag
ttctttctggagaggtga
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