Hemicordylus capensis (graceful crag lizard): 128329490
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Entry
128329490 CDS
T08891
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128329490 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128329490 (THOC6)
03041 Spliceosome [BR:
hcg03041
]
128329490 (THOC6)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
128329490 (THOC6)
Spliceosome [BR:
hcg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128329490 (THOC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_EML
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
WDR54
Beta-prop_DCAF12
Beta-prop_EIPR1
GCK
Motif
Other DBs
NCBI-GeneID:
128329490
NCBI-ProteinID:
XP_053116794
LinkDB
All DBs
Position
6:16961644..16969951
Genome browser
AA seq
372 aa
AA seq
DB search
MSCRNSVGVSNIQERVWLSVKSRWAPIEFFARACRCGRSHATAVTMNIQRSLELLHMTVY
SQSVSPCGKYLAAGNNYGEIAIFSLSAALSSEAKEESKKPVVSFVAHDGPIYTMVSTDRQ
LLSAGNGEVKAWNWSEIVKKGCKEAWCRRPPYGSSLEVPEINGLQLNLKDNSLLMAGGDC
AIHMMDLESGAFTHEYRGHTDYIHCLALREQLRECLSGSEDGTVRLWDLRTGSQVQSIEV
YKYEECSRPQNGKWIRCLATDSDWMVCGGGPALTLWHLRSVTPTTVFPLPQCQQQVMFYQ
DLILSAGHSPTINHLQISGEVKAQIPCIPRCVHSLSINEHSPEHKVLTASGSSHKIDVFT
NFGYRAFSLTFT
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgccgcaactcggtgggcgtatctaatatacaggaaagggtgtggctatctgtt
aaatcgcgctgggcgcctattgagttctttgcacgtgcgtgccgctgcggcagaagccac
gcaacggcagtaacgatgaatattcagcgatcccttgagctcctgcatatgactgtctac
tcccaaagtgtctcaccttgtggcaagtatttagcagctgggaacaactatggagagatt
gccatattcagcctctctgcagcactgagttcagaggccaaagaagagagcaagaagcca
gtggtgtcctttgtagcccatgatggtccaatttataccatggtctccacagaccggcag
ctattgagtgctggcaatggtgaagtcaaagcttggaactggagcgagattgtgaagaag
ggttgcaaggaagcttggtgtaggaggccaccttacgggagcagcttggaggtgccagaa
atcaacggccttcagctgaacctcaaggataatagtcttttaatggccggtggagactgc
gctatccacatgatggatctggagtctggagcctttactcatgaatatcggggccacact
gattacatccactgcttggcacttcgggaacagctgagagagtgtctgtcggggagtgag
gatggcactgtgcgcttgtgggacttacgaactggaagtcaagtacaatccattgaagta
tataaatatgaggaatgcagccggccacagaacgggaagtggatccgttgcctggcaact
gactccgactggatggtatgtggtgggggcccagcactcactctgtggcacctacggtca
gtcacacccaccactgtctttcccctgccccagtgccagcagcaggtgatgttctatcaa
gacctgattctctctgctggccacagcccaaccatcaatcatttgcagatcagtggggag
gtgaaggcccagatcccttgcatcccacgttgtgtccactctctttccataaatgaacac
tcgccagagcacaaggtgctgactgcttctggaagcagccacaaaattgacgtcttcact
aactttggttaccgggccttttccctcaccttcacctag
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integrated database retrieval system
