Hemicordylus capensis (graceful crag lizard): 128329939
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Entry
128329939 CDS
T08891
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03250
Viral life cycle - HIV-1
hcg03272
Virion - Hepatitis viruses
hcg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128329939 (PDCD6IP)
03272 Virion - Hepatitis viruses
128329939 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128329939 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128329939 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcg04147
]
128329939 (PDCD6IP)
Membrane trafficking [BR:
hcg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
128329939 (PDCD6IP)
Exosome [BR:
hcg04147
]
Exosomal proteins
Proteins found in most exosomes
128329939 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Snapin_Pallidin
Helicase_Sgs1
Motif
Other DBs
NCBI-GeneID:
128329939
NCBI-ProteinID:
XP_053117869
LinkDB
All DBs
Position
6:complement(95952305..95988878)
Genome browser
AA seq
872 aa
AA seq
DB search
MASFVTVQLKKASEVDLAKPLCKFIQQTYPGGESQAEHCRAAEELNKLRKSALGRSLDKH
ESSLETLLRYYDQLCAIEPKFPFSENQVCVTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNCGALASQIASEQNLDNDEGLKAAAKHYQFASGAFQHIKDTVLSSLNREPTVDIAP
DTAGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYYGDAFKQCQYKDTLPKYF
YFQEVFPVLAAKHGMMQANAEYHQSILAKQQKKFGEEIARLQHAADLVKTVASRYDEYVN
VKDLSDKISRALTAAKKDNDFIYHDRIPDLKDLEPIGKASLVKATPVTIPLSQKFTDLFE
KMVPLAVQQALTLYNQRKADLVNRSIAQMREATNLANGVLASLNLPAAIEDVSGDSVPQS
ILQKSKSVIEQGGIQTIDQLMKDLPELLQRNREILDESLRILDEEEATDNELRNKFKERW
QRTPSNELYKPLRAEGANFHNILDKAVQADKQVKERYQSHRDTISLLCKPEAELNAAIPS
ANPAKTMQGSEVVNVLKSLLASLDEVKKQREQLENDLKLINFDMTTKFLTALAQDGALNE
EAISVTELDRLYGSLTHKVQDTLKKQEELLNSIQNSHQEFSKMKQSNNESNLRDEVLKNL
AVANDNFVELVANLKEGTKFYNELTEILLKLQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSFPSVPAYQTGPAGGNKPPASAPAPTPAPRTMVSSKPQPPARPPPPVIPTASAGTV
PVAAAAGTVASPAGSATNTAPSQAQGPPYPTYPGYPGYCQMPLPMGYNPYMYSQYNLPYT
QSPMYQNPGQAPYPGPQQPGYPYPQQPYYPQQ
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttcgtgacggtacagctcaagaaggcctccgaggtcgacttggccaagcct
ctctgcaagttcatccagcagacttacccgggcggggagtcgcaggccgagcactgccgc
gccgccgaggagctcaacaagctgcgcaagagcgcgctggggcgctcgctggacaagcac
gagagctccctcgagaccctcctgagatattacgatcagctgtgtgctatagaaccaaag
tttccattttctgaaaatcaggtctgtgtaacttttacttggaaagatgcttttgacaaa
ggatcactatttggaggatctgtcaaacttgctctggcaagtttgggctatgagaagacc
tgtgtgttgttcaattgtggagccttggctagccagatagcatcagaacagaatcttgac
aatgatgaaggattaaaagctgctgctaaacattaccagtttgctagtggtgccttccag
catattaaagataccgtcctctcctcattaaatcgagaacctacagtggacattgcccca
gatacagctggtaccctgagtcttatcatgctggctcaagctcaagaagtcttttttcta
aaagctaccagagataaaatgaaagatgctatcatagcaaaacttgcaaatcaagctgct
gattactatggtgatgcgttcaaacagtgtcagtacaaggataccttacccaagtatttt
tatttccaggaggtgtttcctgttctggctgcaaaacacggcatgatgcaggctaatgca
gagtatcatcagtctatcctggcaaagcaacagaagaaatttggtgaagaaatagcaaga
ttacaacatgctgctgatttagtaaaaacagtggcatctcgttatgacgaatatgtgaat
gtaaaagacttgtctgacaagatcagccgtgcacttacagctgctaagaaggacaatgac
ttcatctatcatgacaggattcctgaccttaaagatctagaacctattgggaaagctagt
ctcgtgaaagctactccagtaactatccctctgagtcagaaatttactgacttgtttgag
aagatggttcctctggcagtgcagcaagctcttaccctttacaaccaaagaaaagcagat
ctggtgaacaggtcaattgctcagatgagagaggccactaatctggcaaatggagtgctg
gcttccctcaatctgcctgctgctattgaggatgtatctggggatagtgttcctcagtct
atcctgcagaagtctaagtctgtgattgagcaaggaggcatccagacaattgatcagttg
atgaaagatcttcctgaactgctacagaggaacagagagattctggatgagtctttaagg
atattggatgaagaggaagcaacagacaatgaactgagaaacaagttcaaggagcgctgg
caaagaacaccatctaatgagctttacaagcctttgagggcagagggagccaatttccat
aatatcttggataaagctgtgcaagccgacaaacaagttaaagaacgttatcagtctcat
cgagatacaatttcgctgttgtgtaagcctgaagcagaactgaatgcagcaattccatca
gcaaatccggcaaaaactatgcagggcagtgaggtggttaatgtcttaaaatccttgcta
gctagtctggatgaggtgaaaaaacagagagaacaacttgagaatgatctgaaactgata
aacttcgacatgacgacaaaattcttaacagcacttgcacaggatggtgctctgaatgaa
gaagccatttctgtcactgagttggatcgcctttatggaagtctcacgcataaagttcag
gacactctgaaaaaacaggaggaactgctcaatagcattcagaattctcaccaggaattt
tccaagatgaaacaatcaaataatgaatccaatttaagagacgaagttctaaagaacttg
gctgtagccaatgacaactttgttgaattagtagcaaacctgaaagaaggcacaaagttt
tacaacgaactgactgaaatccttctgaagttacaaaataaatgcagtgacattgtgttt
gcacgcaaaacggaaagggatgagcttctgaaagatttgcagcaaagtattgctagagag
cccagtgctccttcttttccttctgtgcctgcatatcagacgggtcctgctggaggaaac
aaaccacctgcatctgctccagctccaactccagctcccagaactatggtgtctagtaaa
ccacagccaccagcacgccctcccccaccagtgattcctacagcaagtgcaggcactgtt
cctgtagcggcagccgctgggacagtagcttctccagctggctctgcaactaacacagct
ccctcacaggctcaggggccaccttatccaacatatcccggataccctggatactgccag
atgcctttgccaatgggctacaatccttacatgtatagccaatacaatctaccatacaca
caatcgcctatgtaccaaaatcctggacaagcaccatacccaggacctcagcagcctgga
tacccttacccacaacagccctattacccacagcaataa
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