Hemicordylus capensis (graceful crag lizard): 128329965
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Entry
128329965 CDS
T08891
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04621
NOD-like receptor signaling pathway
hcg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128329965 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128329965 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hcg04054
]
128329965 (NOD1)
Pattern recognition receptors [BR:
hcg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128329965 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
LRR_4
NOD2_WH
AAA_16
AAA_22
ABC_tran
AAA_30
Motif
Other DBs
NCBI-GeneID:
128329965
NCBI-ProteinID:
XP_053117965
LinkDB
All DBs
Position
6:complement(102652571..102705388)
Genome browser
AA seq
951 aa
AA seq
DB search
MEGQPAANAEIIQQASSRASPPSFVNLLKVHRELLVCSIRNTQCLIDNLIKNEYFSTEDA
EIAAQYPTQADKVRKILDLVQSKGEEVAEYCIYVLQQVADAYYELHPWLEEIGFHPSEDI
CNKPVENTDPVSRYHQKLKDELGRDTKFIMSYAQKEDMLLEETYSANIMELINHTNEKLG
NVNGLEDLFDDNVGLINEDGETVYVVGDAGIGKSMLLQKMQNLWSKDEFNVGAKFFFHFR
CRMFSCFNQNDTICLKDLLFKYNCFPDQDPEEIFDFILKFPHTVLFTFDGFDEIHSDFDL
NSVPEICLPNESMHPLALLVGLLSGKLLKGSRKVLTARTGTEVHRNIVRKKVYLRGFSST
NLQEYTKMFFKDTVCRTLVLNQLEANPNLSSLCSVPLFCWIIFKCYDHFHTALDSHEFPD
YTVTLTDIFLLMTEVHLNRTQKTNLLKKNNRSQVETYRSKKETLFALSKIAHMGMEKSLF
VFEQDEITASLSEQDLLLGFLRAVPNYGGCGDQSSYEFLHMTLQSFFTAFFLVTEEKVGA
KELLKFFAECSTPDTTLSSCLPITWLKNHHPTGDDPFRNNEHFHFTNLFLCGLLSKARQK
LLRHLVSPASIKKKRKVLLTYFFESMKSHLKGLSRARLKEYKQIQVMPNFVWMLRCIYET
QSEKVGKGVAKGMRANYIKLTYCNAYSADCSAISFVMHHFQKRLALDLDNNNINDYGIKQ
LLPCFSKLAVLRVSVNQITDQAVRVLYEELSKYKIVTYLGLYNNQITDVGAKYVARLIEE
CPSLIYVKIGANKITTEGGKSLAYAIKRSTTMYEIGMWGNKVGDEGAKAFAEALWDHPTI
TNVSLAFNDITTEGGKYIAEAMKHNNTVNIFWLTKNDLDDEAAECFAEMVKVNKRLGHLW
LIQNQITARGAQCLADALQDNTAIKEICLNGNRISQEEAKAFENEKRIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtcagccagccgctaatgcagagattatacaacaagcctcttcaagagccagt
ccaccatcctttgttaacctcctgaaagtacaccgagaattgctggtctgcagcatccgt
aacacccagtgtttgattgacaacttgattaagaatgagtatttctcgacagaagatgca
gagattgctgcgcagtatcctacacaagcagacaaggtccgtaaaattttggatctagtc
cagagcaaaggagaagaagttgcagagtactgcatttatgtcctgcagcaagtcgctgat
gcttattatgagctgcacccgtggctggaagagattgggtttcacccttcagaggacatt
tgcaataaacctgtggaaaataccgacccagttagtagatatcatcagaagcttaaagat
gaattgggccgagatacaaagttcatcatgtcatatgcccaaaaggaggacatgttgctt
gaagaaacttattctgccaacataatggagttgattaatcacaccaatgagaaactcggt
aacgtgaatggcttggaagacctctttgatgacaatgttggtctaattaatgaagatgga
gagacagtctacgttgtcggtgatgcaggaattggaaaatccatgttgttgcaaaagatg
caaaatctgtggtccaaggatgaattcaatgtaggggccaaattttttttccatttccga
tgccgaatgttcagttgttttaaccagaatgataccatatgtttgaaagacctcctgttc
aaatacaactgtttcccagaccaggacccagaggagatctttgatttcatcctgaagttc
cctcacactgtcctatttacatttgatggctttgatgagatacactctgactttgatctc
aacagtgttccagagatctgcttgcccaatgaatccatgcatccacttgctctactagta
ggccttctcagcgggaaacttctgaagggatctcggaaagtcctgacggcaaggacaggg
acagaagtccatagaaacattgtcagaaagaaggtttatctccgtggcttttccagtact
aacctgcaagagtataccaaaatgttcttcaaagatactgtgtgtcgaaccttggttcta
aaccagctggaagccaacccaaatctgtccagtttatgctcagtgcctttattttgctgg
attatcttcaaatgctatgaccattttcacactgcacttgacagccatgagttcccagac
tacactgttaccttaacagatattttcttgctcatgactgaggtccacttgaaccgaact
caaaagacaaacttgctgaagaagaacaacaggagtcaagtggagacatacaggtccaaa
aaggagactttgtttgcactgagtaaaatagcacatatggggatggagaagtctctcttt
gtctttgagcaagatgaaatcactgccagcctctctgagcaggatttgctcttaggtttc
ctcagggcagttcctaactatggaggctgtggagaccagtcttcctacgaatttctgcac
atgaccttgcaatcttttttcacagcttttttcctggttactgaagagaaagtgggagca
aaggagttgctaaagttttttgctgaatgttctaccccagacaccactctgtctagttgc
ttaccaatcacctggttgaaaaatcaccatccgacaggagacgatcctttccggaataat
gagcactttcatttcaccaacctcttcctttgcggcttgctttccaaggcaaggcagaaa
cttctgaggcatttggtgtcgccagcatccattaagaagaaaaggaaggtgctccttacc
tatttctttgaaagcatgaagtcccacctaaagggcctcagtcgggcaaggcttaaggaa
tacaagcagattcaggtcatgcccaattttgtttggatgctgcggtgcatctacgagaca
cagagtgagaaagtaggcaagggagttgccaagggcatgcgggcaaactatatcaaactg
acctattgcaatgcctattctgctgactgcagtgctatttcctttgtcatgcatcacttc
cagaagcgcctggctcttgacctggacaacaacaatatcaatgattacggaataaaacaa
ctgttaccttgttttagcaagctggctgtactcagggtaagcgtgaaccagatcacagac
caagctgtaagagtgctttatgaagagctgtccaagtacaaaattgtgacttacttgggc
ttgtataacaaccaaattactgatgttggagccaaatatgttgcaagactcattgaagaa
tgtccaagcctcatatatgttaaaataggagcaaacaaaataacaaccgagggaggaaaa
agccttgcatatgccatcaagaggagtacaacaatgtacgagattggaatgtggggtaat
aaagttggggatgaaggggccaaggcctttgcagaagcactgtgggaccatcccacgata
acaaatgtcagtcttgcatttaatgacatcactacagaaggggggaaatatattgcagaa
gctatgaaacacaacaacactgtgaatatattttggctaacaaagaacgacttggatgac
gaagcagctgagtgctttgccgaaatggtaaaggtcaacaagagactgggccatctgtgg
cttatccagaatcagatcactgccagaggagcccagtgcctagctgacgctctccaggac
aatacagctattaaagaaatctgtttgaacggaaaccgaataagccaagaggaagcaaaa
gcctttgaaaatgaaaagaggatcatttgcttttga
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