Hemicordylus capensis (graceful crag lizard): 128330007
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Entry
128330007 CDS
T08891
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128330007 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcg03036
]
128330007 (CHD8)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128330007 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
128330007
NCBI-ProteinID:
XP_053118093
LinkDB
All DBs
Position
6:8940197..9008442
Genome browser
AA seq
2471 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQGAPDPIEEALGLPGVALDSLAGAPKEQQVPPHP
EPPQPQTLPLPDTQPETVPELPQQDQPGLLQAPQDQEVLSQGNPFMGVSSATPTQAVAPS
SSTGGQQVAAAPPPAPKIVILKAPAGGSMAGAHVAQIQAQPIGAANGGKVTFAKVLTGTP
LRPGVSIVSGNAVLATKVSPGGGAPATLHRLVQPGRPVKQLVLQPIKSQATGSTGATPLK
PAVTLTSTPAQGESKRITLVLQQPPAGGGAPGQRHVVLGSLPGKIVLQGNQLAALSQAKG
TPGQPAKVVTIQLQVQQPGQQQQQPGTQKIQLLQQPPVSTSGQQAPLGVSAVQQAQVVGG
SGQRVTVPLKVVLQPQASSSQGSSSGLSVVKVLSSSEVAALPSSSGTTRSSSDESRKLEH
QKKQEKANRIVAEAIARARARGEQNIPRVLNEDELPSVRPEETGERKRRRKGGGERIPKE
ERPRKGRGQGGSGKSKGRGKPSTITPVVGKKRKRNASSDNSDAEVMPAQSPREEEESSVQ
KRRSNRQVKRKKYTEDLDIKITDDEDDEELDVTGPIKAEQPPAPEPPVPEPIPEGEALPS
MQFFVENPSEEDAAIVDKVLSMRVVKKELPNGQFTEAEEFFVKYKNYSYLHCEWATIAQL
EKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEVDRILDESHSIDKDNGEPVIYYL
VKWCSLPYEDSTWELKEDVDEGKVREFKRIQSRHPELKRVARPQAGSWKKLELSHEYKNG
NQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIRGPFLVIAPL
STITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE
MILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELF
SLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETI
IEVELTNIQKKYYRAILEKNFNFLSKGAGHSNMPNLLNTMMELRKCCNHPYLINGAEEKI
LTEFRDSCHHHVPHDFPLQAMVRSSGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILED
YLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIF
DSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSG
REGSIAGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQILLRRTTTITIESEG
KGSTFAKASFVASENRTDIALDDPNFWQKWAKKADLDLEMLNSKNNLVIDTPRVRKQTRH
FSTLKDDDLVEFSDLESDDDDRPRSRRHDRHHHPLHHSYGRTDCFQVEKQLLVYGWGRWR
EILSHGRFKRRMSERDVETICRAILVYCLMHYRGDENIKGFIWDLISPVENGKAKELQNH
SESHAPALSSLPVPRAGLSIPVPRGRKGKKVKSQTTFDVQKAEWIRKYNPDTLFQDEGYK
KHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLAGVVFSEIDIWFPLVDQAEVPTAWWDA
EADKSLLLGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRLDVGEGVDFDKDCE
DPEYKPVGAPAKEQDDEGDPLMMMMDEEISVVDGEEGQPGNLFWPSASALTARLRRLITA
FQRSYKREQLKMEAAERGDRRRRRCEAAFKLKEMVRREKQQRWTRREQSDFYRVVSTFGV
EYDPDTMRFHWSRFRALARLDKKTDESLAKYFHGFVAMCRQVCRLPPAASDESPDPTLFI
EPITEERASRTLYRIDLLRRLREQVLCHPLLEERLALCQPPGPEMPPWWQGGRHDGELLR
GVARHGLSQTDATIMQDPEFSFLAARLNHMHSRAGGTGTPPPLPPPPPQPSGLPLAGAGA
ATAAPSPLLLPPSLHELPAAPQPPGLPPKPDSADDSDSELDLSKISASSSCSSTTGCSDD
SEGEEVSCSGKLFEEEESLLSLPTSHEGNSPQPSASDLLLQERQRAHEWPKDRVLIHRID
LVCQAVLSGKWPSAQQAQGALCLGQGEGLSRLHGEYTSSPIPHICPLASQDEGATSFTRL
RHSGQEKEFTVQIKDEEGIKLTFQKHKLVPNGTMRDRPAITQKKSSKKMVELELQCLEAL
RGPDIDLEARIPVVNKTDGTLLVGDAAPRRADLEVWLQAHPEFAVDPRFLAYMEERRKHR
WPRFPKPVPIEHSCLGLERMQAAGISANGKKGFLPDPTMNRLLPGPVGAENAQKRGRQTP
MEFSNMMALVGAGRVQLGATGPLALHHAHFQPGPAHGSPLSYMPFSTAAAATAASSSGTL
LHPGLGHASFATGPLHLGHPQPVDEDEDEDEMDDLSQGYASSERDFSLLDDDPMMPANSD
SSEEGDEEGDD
NT seq
7416 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccatcatggacctttttgatgatcccaacctcttcggcctagactcgttg
acagatgacagcttcaaccagggggccccggaccccatagaggaggcactgggacttcca
ggcgtggccttggactcactggcaggggcccccaaagaacagcaggtcccgccacaccca
gagcctccccaaccacagactctgcccctcccagatacacagcctgagactgtgcctgaa
ctgccccagcaggaccagccaggacttctgcaggccccgcaagaccaggaggtcctcagc
cagggcaacccattcatgggcgtctcttcggcaacccccacgcaagctgtagcaccctcc
tcctccactggagggcagcaggtagcagccgcgcctcctcctgccccgaaaattgtcatc
ttgaaggcgccggcggggggctcgatggcgggggcccacgtggcccagatccaagcccag
cccatcggcgcagccaacgggggtaaagtgacctttgcgaaagtgctgacgggcaccccc
ttgcggcccggcgtctccatcgtctcgggcaacgccgtgctggccaccaaagtctccccc
gggggaggggcccccgcaacactccatcgcctcgtgcagcccggccggcccgtcaagcag
ctggtgctgcagcccatcaagagccaggcgacggggagcaccggagccacgccgctgaag
cccgctgtgacgctgacctccactccagcgcagggggagtcgaagcgcatcaccctggtt
ctgcagcagccgccagctggcgggggcgccccagggcagcgccacgtggtcctcgggagc
ctgccgggcaagattgtgctgcaggggaaccagctggccgctctgagccaggccaagggc
actcccgggcagcctgccaaagtcgtcaccatccagctccaggtccagcagcctggccag
cagcagcaacagccggggacccagaagatccagctgctgcagcagcctccggtcagcacc
tcgggccagcaggcccccctgggggtctctgcggtgcagcaggcccaggtggtgggcggt
tcgggacagagagtgacggtacccctcaaggtggttctgcagccacaggccagttcatca
caaggcagctcctcggggctctcggtagttaaggtgctgagcagcagcgaggtcgcagct
ctgccctcgtccagtgggactacccggagcagctcggacgaatcccgcaagctggagcac
cagaagaagcaagagaaggccaaccggattgtggcggaagccattgcccgcgcccgagcg
cggggcgagcagaacatcccccgcgtgctgaacgaggacgagttgcccagtgtgcggccc
gaggagacgggagagcgcaagcggcggcggaagggcgggggcgagcgcatccccaaggag
gagcggccgcgcaagggcagaggccaggggggatcgggcaagagcaaaggccgtggaaag
cccagcaccatcacgccagtagtaggaaagaaacggaaacgcaacgcctcttctgacaac
tcggatgcggaggtgatgccagcacagtccccacgtgaggaggaggaaagcagtgtccag
aagcggcgctccaaccggcaggtgaagcggaagaagtacaccgaggatctagacatcaag
atcacagatgacgaagacgacgaggagctggacgtaacggggccgatcaaggccgagcag
cctccagcccccgaacctcccgtgccggaacccatccctgagggggaggctctgccttcc
atgcagttctttgtggaaaaccccagcgaagaggacgctgctatcgtggacaaagtgctt
tccatgcgggtggtgaagaaggagctccccaatgggcagttcacagaggccgaagaattt
tttgtcaaatacaagaactattcttacttgcactgtgaatgggccaccatcgctcagctc
gagaaggacaagcggattcaccagaagctcaagcgctttaaaaccaaaatggctcagatg
aggcacttcttccacgaggacgaagagcccttcaacccagattatgtggaggttgaccgt
atcctggatgagtcacacagcatcgacaaggacaatggcgagcccgtcatctactatctg
gtgaagtggtgttcgctgccttacgaggacagcacgtgggaactcaaggaagatgtggac
gaggggaaagtccgggagttcaaacgcatccagtcgagacaccccgagctcaaacgagtg
gcccgtccccaggcaggttcctggaagaagttggagctgtcccacgagtacaagaacggc
aaccagctgcgagaatatcagctcgagggggtgaattggttgcttttcaactggtacaat
agacaaaactgcatcctggcggacgagatgggtctgggcaaaaccatccagtcgattgcc
ttcctgcaggaggtgtacaacgtgggcatccgggggcccttcctggtcatcgcccctctc
tccaccatcaccaactgggagcgggaattcaacacctggaccgagatgaacaccatcgtg
taccacggcagtcttgcctcccgccagatgatccagcagtacgagatgtactgcaaggac
tcgcggggtcgcctgatcccaggagcgtacaagttcgatgccttgatcaccacctttgag
atgatcctgtcggactgccccgagctgagggagatagagtggcgctgcgtcatcattgac
gaagcccatcgccttaagaatcgcaactgcaaactgctggacagtctcaagcacatggac
ctggagcacaaagtcttattgactggcaccccactccagaacacagtggaggaactcttc
agcctcctgcatttcctcgagccatcccagttcccctcggaatcggagttcctcaaagac
tttggtgacctcaaaactgaggagcaggtgcagaagctgcaggccatcctgaagcccatg
atgctccgccgcctgaaggaggatgtggagaagaacctggcccccaagcaggagaccatc
attgaggtggagctgaccaacatccagaagaagtactaccgggccatcctggagaagaac
ttcaacttcctgtccaaaggggcgggccacagcaacatgcccaacctcctcaacaccatg
atggagctgcgcaagtgctgcaaccatccctacctcatcaacggggcggaagagaagatc
ctgaccgagttccgggattcctgccaccaccacgtgccccacgacttccccctgcaggcc
atggtgcgttcctccgggaagctggtgctgatcgacaagctgcttcccaaactaaaggct
ggcgggcacaaggtgctgatcttttcccaaatggtccgctgcctcgacatcctggaggac
tacctcattcagaagaggtacctctacgagcgcattgacgggcgggtgcgggggaacctg
cggcaggctgccatcgaccgcttcagcaagcctgactcggaccgcttcgtcttcctgctc
tgcacgcgggcagggggcctggggatcaacctgacggccgcagacacctgcatcattttt
gactctgattggaatccccagaatgacctgcaggctcaggctcgctgccaccggattggg
cagagcaaggcggtgaaggtctaccgcctcatcacccgcaactcctacgagcgtgagatg
tttgacaaagccagcctcaagctggggctggacaaggccgtcctgcagtccatgagtggg
cgagagggcagcatcgctgggatccagcagttctccaagaaggagattgaggacctcctg
cgcaagggagcctacgctgccatcatggaagaggatgacgagggctccaagttctgcgaa
gaggatattgaccagatcttgctccgccgtaccaccaccatcaccattgagagcgagggc
aaggggtccacctttgccaaggcgagctttgtggcttctgagaaccggacagacattgcc
ttggatgaccccaacttctggcagaaatgggccaagaaggcagacttggacctcgagatg
ctcaacagcaagaacaacctggtgatagacacgccccgggtgcgaaagcagacccgccac
ttcagcaccctcaaggacgacgacctggtggagttctcggacctggagagcgacgacgat
gaccggccgcgttcccggcgccatgaccgccaccaccacccactccaccactcgtacggg
cgcacggactgcttccaggtggagaaacaactgctggtctatggctggggccgctggcgg
gagatcctgtctcacgggcgattcaagcgccgaatgtccgagcgggacgtggagaccatc
tgccgcgccatccttgtgtactgcctcatgcactaccggggtgacgagaacatcaaggga
tttatctgggacctcatcagtccggttgagaatggcaaagccaaggagctccagaatcac
tctgagagccatgcccctgctctgagctcacttcctgttcctcgggcaggcctgtccatc
ccagtcccacggggccgcaaggggaagaaggtgaagtcccagaccacgttcgacgtccag
aaagccgagtggatccgcaagtacaacccagacacgctcttccaggatgagggctacaag
aaacacctcaagcaccaatgtaacaaggtgctgctgagagtgcgcatgctctattacctg
cgccaggaggtgatcggggaccaagccgaaaaagtgttggcaggtgttgtgttcagtgaa
attgacatctggttcccattggtggatcaggctgaggtccccacggcctggtgggatgct
gaagctgacaagtctttgctccttggagtcttcaaacatggctatgagaagtacaacacc
atgcgagcagaccctgccctctgcttcctggagaaggctggtcggccggacgacaaagcc
attgccgctgagcaccgcctggatgtgggagagggtgtggatttcgacaaggactgtgag
gatcctgagtacaaaccagtgggggctcccgccaaggagcaggatgatgagggtgacccg
ctgatgatgatgatggatgaagaaatctccgtggtggatggtgaggaaggccagccaggg
aacctcttctggccctcggcctcggcactcacggcccgtttgcggaggctgatcaccgcc
ttccaacggagctacaagcgcgagcagctcaagatggaagcagcggagcgaggagaccgg
cggcgccggcgctgtgaggctgccttcaagttgaaggagatggtgcggcgggagaagcag
cagagatggacacgacgagagcagtcggacttctatcgcgtggtctctacgtttggggtg
gagtacgacccggacaccatgcgcttccactggagccgcttccgggccctggcccggcta
gacaagaagacggacgagagccttgccaagtatttccatggctttgtggccatgtgtcgg
caagtgtgccggctgccccctgccgccagcgatgagtccccagacccgaccctgttcatc
gagcccatcacggaggagcgggcctcgcgcaccttgtaccgcatcgatctcctgcggcgc
ctgcgggagcaagtgctgtgccaccccctgctggaggagcggctggcgctgtgccagccc
ccgggcccggagatgccgccctggtggcagggcggccgccacgacggggagctgctgcgc
ggcgtggcccgccacggcctcagccagacagacgccaccatcatgcaggacccggagttc
tcgttcctggcagcccgcctcaaccacatgcacagccgcgccgggggcacggggacgccg
ccgccgctgccgccgccgccgccacagccttcggggttgcctcttgctggagccggtgct
gctactgctgccccttcccccctgctcctccccccatctttgcatgagctacctgctgca
ccacagcccccgggcctccccccgaaacccgactcggccgacgactccgactcggaactg
gacctcagcaaaatctcggcttcttcatcctgttcctccaccacgggctgctctgatgac
agtgagggtgaagaggtctcttgcagtgggaagctctttgaagaggaggaatcgctgctg
tccctgcccacttcccacgagggcaactctccgcagcccagcgcctcggaccttctgctc
caggagcgccaacgagcccacgaatggccaaaggatcgagtgctcatccaccgcattgac
ttggtgtgtcaggctgtgctctcggggaagtggccttccgcacagcaggcccagggggcg
ctgtgtctgggtcagggagaaggcctctcccgcttgcacggagaatacaccagctctcct
atccctcacatctgccccctggcatcgcaggacgaaggggcgacctccttcacccgcctc
aggcacagcggccaagagaaggagttcactgtgcagatcaaagacgaagagggaatcaag
ctgaccttccagaagcacaaattggtcccgaatggcaccatgcgggaccgccctgccatc
acccagaagaagagtagcaagaagatggtggagctggagctgcagtgtctggaggcgctg
aggggccccgatattgacctcgaggcacggatcccagtggtgaacaagacagacgggaca
ctgctggtaggcgacgctgctccccggcgggctgacctggaagtgtggcttcaggcccac
cccgagtttgctgtggaccctcgcttcctggcctacatggaggagcgccggaagcacagg
tggccccgatttccgaagcccgtcccgatagagcacagctgcttggggctggagcggatg
caggcagctggtatctctgccaacggcaagaagggcttcttgccagatcccactatgaac
cgccttctgccaggaccagtcggggctgagaacgcccagaaacggggccgccagacgccc
atggagttctccaacatgatggctctggtgggagccggccgggtccagctaggagccaca
gggcctctcgccttgcaccatgcccatttccaacccggcccggcccacggctccccgttg
tcatacatgcccttctcaactgcagctgctgccacggctgcctcctcctctggcaccctg
ctgcatcccgggcttggccacgccagctttgccacgggccccttgcacctgggccatccc
cagcccgtggacgaggatgaggacgaagacgagatggacgacttgtctcagggctacgcc
agctcggaacgggacttctccttgctcgacgacgaccccatgatgccggccaactctgac
tccagtgaagaaggcgacgaggagggggacgactga
DBGET
integrated database retrieval system
