Hemicordylus capensis (graceful crag lizard): 128330321
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Entry
128330321 CDS
T08891
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128330321 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128330321 (CNOT10)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128330321 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_12
TPR_8
ARM_TT21
ANAPC3
TPR_7
TPR_MalT
DUF6058
Motif
Other DBs
NCBI-GeneID:
128330321
NCBI-ProteinID:
XP_053118962
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All DBs
Position
6:complement(104008099..104043840)
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AA seq
743 aa
AA seq
DB search
MAADKGGDQGTEKHEGAGTSSGITDQEKELSNSALQAFMTGNYEACLQHLSCLQDINKDD
YKIVLNMAVAEFCKNNQTTTDSLKQTLIQLKNQVHSAVEEMDGLDDVENSMLYYNQAVVL
YHLRQYTEAIIVGEKLYQFIEPFEEKFAQAVCFLLIDLYLLTCQAEKALHLLAVLEKMIS
QGGNNKNGKHETGNNTGKEVSNHKAESGTLTEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACAQLGTGGTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGNSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSVQNVVYNDGQSSAIPVASIEFAAICLRNALLLLPEDQQEPK
QENGSKVGNQLGGNNENSENETCSSKSHEGDKFVPAPPSSPLRKQELENLRCSILACSAY
VALALGDNLMALNHADKLLQQTKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTD
VSLGISSNEQEQGSDKGEIEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYDK
ARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKMLSEMRKK
PVFQPAHLVQPIQMPAFTTVQRK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaaaggcggagatcagggaacagagaaacatgaaggagcaggtacctct
tctggcattactgatcaagaaaaggaactttcaaacagtgcactgcaagcttttatgact
ggaaattatgaggcttgtctgcaacacctcagctgcttgcaagacataaacaaagatgat
tacaaaatagtactaaacatggcagtagcagagttctgtaaaaataatcagacaacaacg
gatagcttgaaacaaacacttatccaactgaaaaaccaggttcactcagctgtcgaggaa
atggatggcttagatgatgttgaaaacagcatgctctactacaatcaagctgttgttttg
tatcacctgcggcagtacactgaagctataatagttggagagaagctttaccagttcata
gaaccttttgaggagaagtttgcccaggcagtatgcttcctgcttatagacctatacctg
ctgacctgccaagctgagaaagcactgcatctgcttgctgtactggaaaaaatgatttca
caaggtggaaacaacaaaaatgggaaacatgagacaggtaataatactggtaaggaagtt
tccaatcacaaagctgaaagtggtaccttgacagaagctgctaagtctaaaatacatcag
tacaaggtgcgagcatatattcagatgaagtctttaaaagcatgcaagagagagatcaag
tctgttatgaacacagctggaaattctgctccttctctctttctgaaaagcaactttgag
tatttaagaggcaattatcggaaagcagtaaagctgttgaacagctcaaacattgctgaa
catccaggatttatgaagacaggtgaatgcttacggtgcatgttctggaataatcttgga
tgcatccattttgcaatggggaaacacaacttaggaattttctattttaaaaaggctttg
caggaaaatgataatgcctgtgcacaacttggaacaggtggtacagacccaggcaaaaag
ttctcaggacgaccaatgtgcaccttattgactaacaaacgttatgagttactgtataac
tgtggcatccagctcttacacattggaaggccactagctgcttttgaatgcctgatagaa
gctgtccaggtttatcactcgaaccctcgcctctggttaagaatagcggaatgctgcatt
gctgccaataaaggaaattcggaacaggaaacaaagggtcttccaagcaaaaagggcatt
gtacaatccattgtaggtcaaggctatcatcgtaaaatagtcttagcatcacagtctgta
caaaatgttgtttataatgatggtcaatcttcagctattcctgtagccagcatagaattt
gcagccatttgcctaagaaatgccttgctgctgcttcctgaagatcagcaggaaccaaag
caggaaaatggatctaaagttggcaaccagttgggagggaacaatgagaacagtgagaac
gagacatgcagcagtaaaagtcatgaaggagacaaatttgttccagctccaccatcttct
ccactgaggaaacaggaattagaaaatctaaggtgctccatacttgcttgcagtgcttat
gtggctttggcactgggggataaccttatggctctgaatcatgcagacaaacttcttcag
cagacaaaactgtctggatcccttaagtttcttggccatttgtatgccgccgaggctctc
atctcgctagacagaatctctgatgctattactcacttgaaccctgagaatgtcactgat
gtgtccctggggatttcttcaaacgagcaggagcaaggatctgataaaggagaaattgaa
gctatggaatcctctggcaagcaaaccccgcagtgttaccccagttctgtcacttctgca
cgaacaatgatgctgttcaaccttggaagtgcttactgcttgagaagcgagtatgacaaa
gctaggaaatgtctgcaccaggctgcctcactgattcatcctaaagagatcccaccagag
gctatcttgctggctgtataccttgaacttcagaatggcaacactcagctagcactgcag
atcatcaaaagaaatcagcttctcccttcagtgaaaatgctctcagagatgcgaaagaaa
cctgtatttcagcctgcccacctggtccagcccatccagatgccagcattcaccactgtt
cagaggaagtga
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