Hemicordylus capensis (graceful crag lizard): 128330508
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Entry
128330508 CDS
T08891
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128330508 (TRIM56)
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128330508 (TRIM56)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128330508 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
SlyX
Motif
Other DBs
NCBI-GeneID:
128330508
NCBI-ProteinID:
XP_053119475
LinkDB
All DBs
Position
6:complement(351787..358990)
Genome browser
AA seq
699 aa
AA seq
DB search
MAAPGGPSLSEALTSSFLTCTICLERFCQPKILPCLHTYCCACLERLEAGRQALQCPECR
QRVPLPAGVGSLQTNFFINGLLDLLARPAAAPAAPPTCSLCPLLGRGAGQPAASRCLDCA
DDMCRACARGHRCSRLTHAHCIVAMEGYLSGQHDEELRKRQASRCREHPGEELRFFCRPC
AAALCRECRLGPHLEHPCLPLAQAAQERRPLIAGLLAGVEEKVRLIARSRAGLEERLQRL
EGQEASIREAVERAGAAALQQLLAHQEEVLGQLSACVAERRKACGALRAELELQEQVASS
TVAFAQKVLGLGREAEVVSLEQMISERLRQLRDFSWEPLSFRLPRLELLQSSCGSLFRLE
CDQEEEEEEEEEEEATKGTKKKKKKRKPQPQQPQQPPSPREAGETPGQGALLGEGGPGPA
EAPTAPAREPEAPRLTPRPLFWCSFWVKIPSDKKRPQVTGICPFGSAELLVADAMNRKLK
RFSLQGEFKGTIPVPDNVAPFSVAAVGSKVAFTAGSRLYLLNGEGGLVWQKALQLGQASH
AVTALEGGHVVVSVAGRLEVYDLEGRLVQKVVPEGGSQERCLVFLARWKGGLVGSDWYRH
SLVMLQRSGQLVAELRPEQLSGCQPGAVCADAAGTVYVVLREVNKVAAFSKDGEQLGLFL
TAEDNIDRPRVATVTREGRFAVALSNGTVHIFKIRYQGK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccccggtggcccctccctctcggaggccctcaccagcagcttcctgacttgc
accatctgcctggagcgcttctgccagcccaagatcctgccctgcctgcacacctactgc
tgcgcctgcctggagaggctggaggccggccgccaggcgctgcagtgccccgagtgccgc
cagcgggtcccgctcccggccggcgtgggcagcctgcagaccaacttcttcatcaacggc
ctcctggacctgctggcccgccccgccgccgccccggccgccccgcccacctgcagcctc
tgcccgctcctcggccggggggccggccagcccgccgcgtcccggtgcttggactgcgcc
gacgacatgtgccgggcctgcgcccgcgggcaccgctgctcccggctgacccacgcccac
tgcatcgtcgccatggagggctacctctccggccagcacgacgaggagctccgcaagcgg
caggcctcgcgctgcagggagcacccgggcgaggagctgcgcttcttctgcaggccctgc
gccgccgccctctgccgcgagtgccgcctgggcccccacctggagcacccctgcctccct
ctggctcaggcggcccaggagcgccggccgctcatcgcgggcctcctggcgggcgtggag
gagaaggtgaggctcatcgcccggagcagggccggcctggaggagcggctgcagcggctg
gaggggcaggaggcctccatccgggaggcggtggagcgggcgggcgcggcggccctgcag
cagctgctggcccaccaggaggaggtgctgggccagctctcggcctgcgtggcggagcgg
aggaaggcctgcggggcgctgcgggccgagctggagctccaggagcaggtggcctccagc
accgtggcctttgcccagaaggtgctgggcctgggccgggaggcggaggtcgtctccctg
gagcagatgatctccgagaggctgaggcagctgcgggatttctcttgggagccgctctcc
ttccggctgccccggctggagcttctgcagagcagctgcggcagcctcttccgcctggag
tgcgaccaggaggaggaggaggaggaggaggaggaggaggaagccaccaaagggaccaag
aagaagaagaagaagaggaagccacagccacagcagccgcagcagccgccctccccgaga
gaagctggggagacccctgggcagggggccctgctgggtgaggggggtcctggccctgca
gaagcccccacagcccctgccagggaaccagaagccccccggctcacccccaggcctctc
ttctggtgcagcttctgggtgaagatccccagtgacaagaaacggccccaggtcaccggc
atctgcccctttggctccgctgagctcctggtggctgatgccatgaaccggaaactcaag
cgcttctcgctgcagggagagttcaagggcaccatcccggtgccggacaacgtggccccc
ttcagcgtggctgccgtgggcagcaaggtggccttcacggccgggtctcggctctacctc
ttgaacggggagggggggctggtgtggcaaaaggccctccagctggggcaggccagccac
gcagtgaccgccctggagggtggccacgtggtggtgagcgtggctgggcgcttggaggtc
tacgacttggaggggcggctggtgcagaaagtggtgcccgaaggcggcagccaggagcgg
tgcctggtcttcttggcccgctggaagggggggctggtgggttccgactggtaccggcac
agcctggtcatgctgcagcggagcgggcagctggtggccgagttgcgcccggagcagctg
agcgggtgccagccgggcgccgtctgtgccgatgccgcagggaccgtctacgtggtgctg
cgggaggttaacaaggtggccgccttctccaaggatggggagcagctggggctcttcctc
accgctgaggacaacattgaccggccccgggtggccaccgtgactcgggaggggcgcttt
gcggtggccctcagcaacgggactgtccacatcttcaagatcaggtatcagggcaagtga
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integrated database retrieval system
