Hemicordylus capensis (graceful crag lizard): 128330680
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Entry
128330680 CDS
T08891
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128330680 (TRIM71)
04121 Ubiquitin system [BR:
hcg04121
]
128330680 (TRIM71)
Enzymes [BR:
hcg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128330680 (TRIM71)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128330680 (TRIM71)
Ubiquitin system [BR:
hcg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128330680 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
zf-RING_5
ANCHR-like_BBOX
zf-RING_UBOX
zf-C3HC4
zf-RING_2
DUF5711
DUF4094
PspA_IM30
Motif
Other DBs
NCBI-GeneID:
128330680
NCBI-ProteinID:
XP_053119849
LinkDB
All DBs
Position
6:103919117..104004803
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AA seq
918 aa
AA seq
DB search
MASFPESDFQICPLCKEMCGSPAPISSNSSTSSSSSQTSNSSGGGGGGGGGGGGSSSSSS
CAPSRRLHVLPCLHAFCRQCLEAQRHPTAGDSLKLRCPICDQKVVISEPSGMDALPSSNF
LLSNLLDVVVVAAAAEDQKNNGRPSGPGGGSGGGGGGGGGGPGGGGGGSGPGGGGGGSNS
STNNRHHHPRQQQAQQQHRVSAGGSSPGSGAGSASSGGGGGASLLLRQPHSRQGEPRCSS
CDEGAAVSSRCLDCQEHLCDNCVRAHQRVRLTKDHFIERFGPGPPASAGPGPAAAAAAAA
AAQLALSQPYSAAPYNILSVFPDRVNYCQHHDDEVLHFYCDTCSVPICRECTMGRHVGHS
FIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKMVQSEVKAVTCR
HKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDNTISAVQQVLEEGRSMDI
LLARDRMLTQVQELKNVRGFLQPQEDDRVMFTPPDQALFMAIKSMGFVSSGAFAPLTKAT
GEGLKRALQGKVASFTVIGYDHDGEPRLSGGDMISAVVMGPDGNLFGADIGDQQNGTYLV
NYRPQMEGEHLISVMMCNQHIENSPFKVMVKSGRSYVGIGLPGLCFASEGDSDGKLCRPW
GVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVASDSSRRIVVA
DKDNHRIQIFTFDGQFILKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFGPD
GVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTN
NGQFLRPQGVAVDQEGRIIVADSRNHRVQIFEPNGSFLCKFGTQGSGFGQMDRPSGITVT
PDGMIVVVDFGNNRILIF
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagtcggatttccagatctgcccgctgtgcaaggagatgtgtggc
tcgccggctcccatctcgtccaactcgtccacctcctcgtcctcttcgcagacctccaac
tcctccggaggaggaggaggaggagggggcggcggcggcggctcgtcgtcgtcttcctct
tgtgccccgtcgaggcgcctgcacgtcctgccctgcctacacgccttctgccgccagtgc
ctggaggcgcagcgccaccccaccgcgggggactcgctcaagctgcgctgccccatctgc
gaccagaaggtggtgatctcggagccgtcgggcatggacgcgctgccctcctccaacttc
ctcctcagtaacctgctcgacgtggtcgtcgtggccgctgccgccgaggaccaaaagaac
aacggccggcccagcggtccgggcggaggcagtgggggcggaggaggaggcggcggcggc
ggcccgggaggaggcggcggcggcagcggcccgggagggggcggcgggggaagcaacagc
agcaccaacaaccggcaccaccatccccgccagcagcaagcgcagcagcaacaccgcgtc
tcggcgggcggctcgtcgccaggctcgggggcaggctcggcgtcgtcggggggaggcgga
ggcgcctcgctgctgctccggcagccccacagccggcaaggcgagccccgctgcagctcg
tgcgacgagggcgccgccgtcagctcccgctgcctcgactgccaagagcacctgtgcgac
aactgcgtgcgcgcccaccagcgcgtccgcctcaccaaggaccacttcatcgagcgcttc
ggccccggaccgcccgcctccgccgggcccgggcccgcggcggcagcagcagcagccgcc
gccgcgcagctcgccctcagccagccctattccgccgcgccttacaacatcctctccgtc
ttcccggacagggtcaactactgccagcatcatgacgacgaggtgctgcatttctactgt
gacacttgttctgttcccatctgccgggaatgtaccatgggacggcatgtaggtcacagc
tttatctacctccaagatgccctgcaggactccaggacccttaccattcagctactagct
gatgctcaacagggacgccaggccattcagctcagtattgagcaagcccaagctgtagca
gaacaagttgagatgaaggcaaagatggtacaatctgaagtgaaggccgtgacatgcaga
cacaagaaggccctagaagaaagggaatgcgagctgctatggaaggtggagaaaatccgg
caagtgaaagctaagtcactctacctccaggtggaaaagttgcgtcaaaacctaaacaag
ctagacaacaccataagtgcggtccagcaggtcctagaggaagggcggagcatggatatc
ctcttggctcgagaccgcatgctcactcaggtacaggagctgaagaatgtcaggggcttc
ctgcagcctcaagaggacgacagggtcatgttcacgcctcctgatcaggcattgtttatg
gccatcaaatccatggggtttgtcagcagtggggcttttgctcctctgaccaaagccact
ggggaaggtctcaaacgtgcactgcaaggcaaagtggcctctttcacagtaataggctat
gaccacgatggcgagcctcgcctttcgggaggagacatgatctctgctgtggtcatgggg
cctgatggaaatctctttggagcagatattggtgatcagcagaacggaacctatctagtc
aactacaggccacagatggagggagagcatctgatctcggtcatgatgtgcaaccagcat
atagaaaatagcccattcaaggttatggtaaaatctgggcgcagctatgttggcattgga
ctaccagggctttgctttgctagcgaaggggatagtgatggcaagttgtgtcgtccttgg
ggagttagtgtagataaggaaggctatatcattgttgccgatcgcagcaacaaccgtatc
caggtctttaagccctgtggtgctttccaccacaagtttggcaccttgggctccaggcct
ggccagtttgataggcctgccggcgtcgcttccgactcatcgcggaggattgttgtggcg
gacaaggacaatcatcgcatccagatcttcacctttgatggccagttcattctgaagttt
ggggagaaaggaaccaagaacgggcagttcaattacccatgggatgtagcagtgaactcc
gagggcaaaatcctggtgtccgacacaaggaatcatcgggttcagttgtttgggcctgac
ggagtgttcctgaacaagtatggttttgaaggggcactctggaagcactttgattccccg
aggggtgtgacattcaatcacgagggccacctagttgtgacagatttcaacaatcatcgt
ctacttgtcatacatcccgactgccagtcagcacgcttccttggatccgaaggcacaaat
aatggccagtttctgcgcccacaaggtgtggcggtagatcaagaaggtcgtatcattgtg
gcagattccaggaaccatcgtgtacagatatttgagccgaatggtagttttttatgcaaa
tttggcactcagggaagtggctttggtcagatggaccgtccttcaggtattactgtcacc
ccagatggcatgattgttgtggttgactttggaaacaatcgaattctcatcttctaa
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