Hemicordylus capensis (graceful crag lizard): 128330722
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Entry
128330722 CDS
T08891
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128330722 (VPS50)
Membrane trafficking [BR:
hcg04131
]
Protein recycling
Others
EARP complex
128330722 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DcpS_C
Motif
Other DBs
NCBI-GeneID:
128330722
NCBI-ProteinID:
XP_053119942
LinkDB
All DBs
Position
6:complement(132053665..132181997)
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AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQENIHDLSPLENFRIPSKEELRELREQPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELEKFPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNSAKEGFTQASLGLLANQRKRQLLVGLLKSLRTIKTL
QQTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMEWHEKYDRDGSASSSDG
SSVMGAEESNFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLDISS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSSFSI
LQLHEFKFMAQSRSPSVSPSKQPASEIETTITLFEQYCNGGNPFEIQANNKDDETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSISRETLRSKKRSDYCLS
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDTF
ESTGLGLSSSRLRTTLNRIQESLIDLEVSSDATGTLTAAEERKEKVPSPHLSHLVILTSG
STLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPPAKKPFLQQFYSQTVSTANELRKPI
YWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDSLLKEFEQFNRKLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgacagggtctcaagagtcctcaagagaatatt
catgatctgagcccccttgagaacttcagaattcctagcaaggaggaactccgagagctc
cgggaacaaccgactgatcctcaggcacagcaagaaataattaactccattgaagaagtc
tatttttcgaatgattcctttgatattgttaagtatgagttggagaagtttcctcctgtc
cttagtcttcaagaactggaagagtacagagacaaactcaagcagcagcaagcagctgta
tctaaaaaggttgcagacttgatacttgaaaaacagcctgcatatgtcaaggagcttgaa
cgagttacatcattacagactggccttcagttagctgctgtcatttgtacaaatggaaga
cgacacctaaatagtgcaaaggaaggttttactcaagccagcttgggccttctggcgaat
caacgaaaacgacagttgctggtggggctgctaaaatctctgagaacaataaaaaccttg
caacagactgatgtgcggttaagtgaaatgttggaggaggaggattacccgggggctata
caactgtgtctggaatgccagaaagcggctagcactttcaaacactacagttgcataagt
gagttgaattcaaaacttcaagacactttggagcaaattgaggagcagttagatgtagcg
ctctccaaaatctgcaagaactttgatatcaaccattacaccaaggtgcagcaggcttac
agacttctagggaaaacacagacagcaatggaccaactgcatatgcactttactcaagcc
attcacaacacagtattccaagttgttctcggttatgtagagctgtgtgcaggcaataca
gatactaagtttcagaaacttcagtacaaggacctctgcacgcacattacatcggacagt
tacattccttgccttgctgatctctgcaaagccctctgggaagttatgctcagttactat
cgaacaatggagtggcatgagaaatatgatcgtgatgggtctgcttcatcttctgatgga
agcagtgttatgggtgctgaggagagcaattttgaccgtagttacgtgaaaaagaaattg
gaacatgggctttcaagaatatggcaggatgttcaactgaaagtgaagacttatttgctg
ggcacagacatgtccaacttcaaatacgatgacttcatctttgtgctggatattagcagc
agactcatgcaagtcggagaagaattttgtggcagcaagtctgaagttttgcaagagtca
attcgaaaacaaagcgttaattatttcaagaactatcacagaactcgtcttgaagaattg
agaatgttcttggagaatgagacatgggagctttgccctgttaaatcaagcttcagcata
ttgcaacttcatgaatttaagttcatggcacagtcacgttcgccttcggtgtctccgagc
aagcagcctgcttcagaaatagaaacaactataactctgtttgagcagtactgtaatgga
ggaaacccctttgaaattcaagccaacaacaaggatgatgagacggaagatgtgctggct
tctaatgggtatgaatcagatgagcaggaaaagagtgcctatcaagagtacgacagcgac
agtgatgttcccgaagaactgaaaagagactatgttgatgaacagactggagatgctcct
gtcaaaagtatttctcgagaaaccctgaggagtaagaagcggtcagattattgcctcagc
aaggtgaatgcgcccattttaaccaacactacacttaatgtaataagactcgttggcaaa
tacatgcagatgatgaacatcttgaagccaattgcatttgatgtgatccacttcatgtct
cagctttttgattactatttgtatgcaatatatacattttttggccgaaatgacacattt
gaatcaacaggactaggactcagcagcagcagactccgaacgactctgaacagaatacag
gagagtctgattgatctggaggtttcttctgatgctactggaactctgactgcagctgaa
gaaaggaaggagaaagttcccagtccacatctcagtcatcttgttattttgacatctggc
agcactctgtacggcttggcagagagagtggtagccacagaatccttagtatttttagct
gagcagtttgagttcctccagccccatcttgatgctgtgatgcctccagccaagaaacct
tttctgcagcagttctactctcagacagtttcaacagccaatgaactgcgcaaacctatc
tactggattgtagctgctaaagcaattgactatgaacagatgctgctcctaatggcaaat
gtgaaatgggatgtgaaggaaatcatgtcccaacacaatatttatgtagattctcttcta
aaggaatttgaacagtttaacaggaagttgaatgaggtatctaagagagtccgtattcca
ttgccagtgtcgaatattctttgggaacactgtatacgactagccaataggactattgta
gaaggttatgctaatgtcaaaaagtgcagcaatgaaggccgcgccttgatgcaattggac
ttccagcaatttttaatgaagctagagaagctcacagatatcagacctattccagataaa
gaatttgttgagacctacatcaaagcatactatttgaccgaaaatgacatggaacgctgg
atcaaggaacacagggaatattctaccaagcaactgacgaacttggtgaatgtttgtctg
ggatcccacattaacaaaaaagcaagacagaaactgttagcagctattgatgacatcgat
aggcctaaaagataa
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