Hemicordylus capensis (graceful crag lizard): 128331561
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Entry
128331561 CDS
T08891
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5 isoform X1
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03018
RNA degradation
hcg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128331561 (LSM5)
09123 Folding, sorting and degradation
03018 RNA degradation
128331561 (LSM5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128331561 (LSM5)
03041 Spliceosome [BR:
hcg03041
]
128331561 (LSM5)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128331561 (LSM5)
mRNA degradation factors
5'-3' decay
Lsm complex
128331561 (LSM5)
Spliceosome [BR:
hcg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
128331561 (LSM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
128331561
NCBI-ProteinID:
XP_053121100
LinkDB
All DBs
Position
6:92231040..92237868
Genome browser
AA seq
90 aa
AA seq
DB search
MATNATNQSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITP
EGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaacgcgactaatcagtctcagctattgcctcttgagcttgtggacaagtgt
ataggatcacgcattcacattgtgatgaaaagcgataaagaaattgttggcacactccta
ggatttgatgattttgtcaacatggtgctagaagatgttacagaatttgaaatcacacct
gaaggacgaagaatcacgaagttagatcagattttgctaaatggaaataacataacaatg
ctggttcctggaggagaaggaccagaagtataa
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integrated database retrieval system
