Hemicordylus capensis (graceful crag lizard): 128331777
Help
Entry
128331777 CDS
T08891
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
128331777 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcg03036
]
128331777 (HDAC5)
Enzymes [BR:
hcg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
128331777 (HDAC5)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
128331777 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
128331777
NCBI-ProteinID:
XP_053121604
LinkDB
All DBs
Position
6:37028448..37166977
Genome browser
AA seq
1131 aa
AA seq
DB search
MLLVSSSWGLPEMLQTIYETESCFSSDGVSGREPSLELLSRAQIHAIPVAAVDLKPVLPA
VMQSSCNNNSSSSSSPVDLRMDARPSMPSVDPAVREQQLQQELLALKQQQHLQKQLLFAE
FQKQHEHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRKREQQRQEELEKQRLEQQLLI
LRNKEKSKESAIASTEVKLKLQEFLLSKSKEPAVVGGLNHSLPQHTKCWGAHHTSLDQSS
PPQTGSPGTPPSCKLPLLGSYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRK
DGTVISTFKKRAVEITVSSMCNSAPGSGPSSPNSSNSAITENGLTGSVPNIHTEQMLPQH
RAVTMDGSASQLSLYTSPSLPNISLGLQATVTVTNSHLNASPNLSTQPEAERQAIQSLRQ
GGALTSKFLSMSSIPSCLLGVALEGETNNHGHASLLQHVLLLEQARQQNTLIAVPLHGQS
PLVTGERIPSNLRTVSKLPRHRPLSRTQSSPLPQSPQALQHLVVQQQHQHFLEKQKQQQI
QLGKIITKTGELLRPPTTHPEETEEELTEQQESLGLGSFVVDGSTESEGTQDDLEEEKEE
EEEEEEEVVEEQSCLQVKDEAGESGLEEEQEVEELGVTYRQVFADAHQLRPLQFYQTPLS
INTLPHQALSRTQSSPASTSLKSSTAEPLAKHLFTTGIVYDTFMLKHQCTCGNTNVHPEH
AGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEHHTLLYGTSPLNRQKLDSKKL
LGPLTQKMYAVLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVASGELKNGFAVI
RPPGHHAEESTAMGFCFFNSVAIAAKLLQQKLAISKILIVDWDIHHGNGTQQAFYSDPNI
LYISLHRYDNGNFFPGSGAPEEVGSGIGVGYNVNIAWTGGVDPPIGDVEYLTAFRTVVMP
IANEFSPDVVLVSAGFDAVEGHLSPLGGYSVTAKCFGHLTKQLMKLAGGRVVLALEGGHD
LTAICDASEACVSSLLGLELEQLDQALLQQKPNANAVATLEKVIDIQSKHWSSVKRSAAI
VGCSLLEAQKGEAEEAETVSAMASLSVDTEQGKAESGIRQPEEPMEAEPVL
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttgtatcctcatcgtggggactgccagagatgttgcagacaatttacgaaact
gaatcgtgtttctcttcagatggagtttctggacgtgagccatcactggaactcctctcg
cgggcacagatccatgccatacctgtggccgctgtggacttgaagccggtacttcccgcg
gtgatgcagagctcttgcaacaacaacagcagcagtagcagcagcccggtggacttgcga
atggatgcccggcccagcatgccctctgtggacccagctgtccgagaacagcagctgcag
caggaactcttggccttgaaacagcagcagcatttgcagaagcagctgctctttgccgag
tttcagaagcagcatgagcatctaacacggcagcatgaagtccagttgcagaagcacctc
aagcaacagcaggagatgctggcagcaaagcgtcaacaggaactggagcagcagcgtaag
cgagaacaacagcggcaggaagagctggagaagcagcgtctggagcagcagctacttatc
ttgcgcaacaaagaaaaaagcaaagagagtgccattgccagcactgaagtgaagctgaaa
cttcaggagttccttctcagcaagtcaaaagagccagctgtagtaggcggcttgaaccat
tccctccctcagcacaccaaatgctggggggctcaccatacctcattggaccagagttcc
cctccccaaacaggaagcccgggaacaccaccctcttgcaaactacctttactcggctct
tacgacagcagagacgactttccacttcggaaaaccgcctcagaacccaacttaaaagtg
cgctcacgattaaaacagaaggttgcagagaggcggagcagccccctactgcggaggaaa
gatgggaccgtcataagcaccttcaaaaaacgagcagttgaaatcacagtgtcttcaatg
tgcaacagtgcccctgggtctggtcctagttccccaaacagctctaacagcgccatcaca
gaaaatggacttactggctcagtgcccaatatccatacagagcagatgctaccccaacac
cgagctgtcacaatggatgggtcagctagccagctcagcttatacacttccccgtctttg
cctaacatctccttaggattgcaagctaccgtcacggtgacaaattcgcaccttaacgcc
tccccaaacctttctacgcagccagaagcggagcgtcaggcgatccagtcattgcgccag
gggggtgccttgacaagcaagtttctgagcatgtcgtcaatccccagttgccttctggga
gtggccctggagggcgagaccaacaaccatggacatgcttccttgcttcagcacgtcctg
ctcctggaacaggctcggcaacagaacacactaattgctgttcctctgcatggccagtcc
cctctggtgacaggggagcgcatccctagcaacctgcggaccgtgagcaagctgccccgg
caccgcccactgagccgcacccagtcgtcgccgctgccccagagccctcaagccctccag
catctggtggtgcagcaacagcatcagcacttcttggagaaacagaagcagcagcagatc
cagctgggaaagatcatcaccaagaccggtgagctgctgcggccacccactacgcacccc
gaggagacggaggaggagctgacggagcaacaggagtccctgggcctgggctcctttgtg
gtggatgggtcgacagagagcgagggaacgcaggatgacctagaggaggagaaagaagag
gaagaggaggaggaggaggaggtggtggaagagcagagctgtctccaagtgaaggatgag
gccggggagagcgggctggaagaagagcaggaggtggaggagctgggcgtgacttacagg
caggtgtttgcagatgcacatcagctgcgacccctccagttttaccagactcccctcagc
atcaacaccctgccacatcaagccctcagccgcacccaatcctcacctgccagcaccagc
ttgaagagcagtacagctgaacctttggccaaacaccttttcactacaggcatcgtatat
gacacatttatgctgaagcaccagtgtacgtgtggaaacactaatgttcacccagagcat
gctgggagaatccagagtatctggtccagattacaagagacagggttgttaagcaagtgc
gagaggatccgaggccggaaagcaacgctagatgaaatccagacagtccattcggagcat
cacacgttactatatggaaccagccccctgaatcggcaaaaacttgacagcaagaaattg
ctaggtccccttactcagaagatgtatgctgtcctcccatgtggcggtattggggttgac
agtgacacagtgtggaacgagatgcactcatccagtgcggtccgcatggctgttggatgc
ttggtggagctggccttcaaagtggcatctggggagcttaagaatggatttgctgtcatc
cggccaccaggtcatcatgcagaagagtccacagctatgggcttctgcttcttcaactct
gttgccattgctgccaagctcctccagcaaaaacttgccatcagcaaaatcctcattgtg
gactgggatattcaccatggtaatggcactcagcaggcattctacagcgaccccaacata
ctctatatctccctccatcgctatgacaacggcaatttcttcccaggcagtggagcccct
gaggaggttggcagtgggattggtgtaggctacaacgtaaacattgcctggactggtgga
gtggatccccccattggtgatgtggagtatctgactgcctttcggactgtggtgatgcca
atagccaatgaattctcaccagatgtggtcctcgtttctgccggcttcgatgctgttgaa
ggccatctgtccccattgggtggatattctgtcacggccaaatgttttggacacctaacc
aagcagctgatgaaactggcaggtgggcgtgttgttctagcgttggagggaggtcatgat
ctgacagccatctgtgatgcctctgaggcctgcgtctcctccttgcttggccttgagctg
gagcagctggatcaagctctgttgcaacaaaagcccaacgccaatgctgtggccaccctg
gagaaagtcattgatatccagagcaagcactggagctcagtgaaacgctccgcagcaatt
gtcggctgctccctgctggaggcgcagaagggcgaggcagaggaggcggagacagtcagc
gccatggcatccctgtcggtggacacagagcagggaaaagcagagagcggtattcgacaa
ccagaagagccaatggaggccgaacccgtgttgtga
DBGET
integrated database retrieval system
