Hemicordylus capensis (graceful crag lizard): 128331855
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Entry
128331855 CDS
T08891
Symbol
SLX1A
Name
(RefSeq) structure-specific endonuclease subunit SLX1 isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128331855 (SLX1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcg03400
]
128331855 (SLX1A)
DNA repair and recombination proteins [BR:
hcg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128331855 (SLX1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H_2
T5orf172
zf-RING_2
zf-HC5HC2H
PHD_NSD
U-box_ZFPL1
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
128331855
NCBI-ProteinID:
XP_053121782
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All DBs
Position
6:17898170..17904492
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AA seq
294 aa
AA seq
DB search
MLHGRQKFSRSVTPGKVLAVAMVVEVRGFFGVYLLYCTNPRYQGRVYVGFTVNPERRIGQ
HNAGKHRGGAWKTSGRGPWDMVLIVHGFPSDVAALRFEWAWQHPHASRRLTHITRRTSRE
TRFDFHLRVLAHMLRVAPWCRLPLTIRWLKQEYRRDFPAGLEPPLHMPVAFGQVRAVKET
KEARSVPTEGLTAVPKRCSVCLKRFQDEENDSPLHCFHSGCTMAAHITCLAQVFLEKEPD
QFLPIEGQCPGCKNLVLWGDLIRHYKGCYGNLEADPTSSQEHWTNELNCEGACM
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatggcaggcagaaattcagcagatcggtcacacctggtaaagtcttggcggtg
gccatggtagtggaagtgcgtggcttcttcggggtctatcttctgtattgcaccaaccct
cgttaccaaggccgggtctacgttggcttcacagtcaatcctgaacggcgtattggtcag
cacaatgctgggaagcaccgtggcggggcctggaagacaagcggccgtgggccttgggac
atggtgctgatcgttcatggcttcccttccgatgtggctgccctgaggtttgagtgggcc
tggcagcacccacacgcttcccgccgtctcactcacatcacccgccgcacctcccgggag
acgcgctttgacttccacctgcgcgtcttagcccacatgctccgagtggccccctggtgc
cgtttgcctctgactattcgctggctcaagcaggaatatcgccgagatttccccgctggc
ttggaacccccactgcacatgccagtggcctttgggcaggtccgagctgtcaaggagacc
aaggaagcaagatcagtgcccacagagggactgacagctgttccaaaacgctgtagtgtc
tgtctcaaaaggttccaggatgaggagaacgacagccccttgcactgtttccactctggc
tgcaccatggctgctcatattacatgcctggctcaagttttcctagagaaagagccagat
cagttcctgcccatagaagggcaatgcccaggctgcaagaatcttgtgctctggggagat
ctgattcggcactataaaggttgctatggcaatctagaggcagatcctacctcctcccag
gaacattggaccaatgagctgaactgtgaaggagcctgtatgtga
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