Hemicordylus capensis (graceful crag lizard): 128331997
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Entry
128331997 CDS
T08891
Symbol
NUP42
Name
(RefSeq) nucleoporin NUP42 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128331997 (NUP42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128331997 (NUP42)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128331997 (NUP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
zf-CCCH_10
zf-CCCH_PARP12
DinI
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
128331997
NCBI-ProteinID:
XP_053122126
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Position
6:complement(119275617..119287550)
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AA seq
418 aa
AA seq
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MSYSSASVCRYFLQGNCRYGDRCWYLHPRQQVGRSSQASSQNAGSSRREAWSGHNDRYSN
VQTSSFSKPSNWHSNRDHGKSYFGHQAAQGFSQNRFAALNSSENISTDGTKDDEEHLLEL
IMKDMEIWESSGQWMFSSYSPLKDKSNISGFPAFLPEELRLEYYNCRANNNIQNYITSVQ
QLVTQWRSRLLELKHMNASTKSVLKSELKKTPVQPPPAFGFGGQNTSAFGTSTFPVNNQS
SAQAFSFKAPSELAQVSTGSAPAFGNITNVQNHPVLSANSSSTASHSVGFGNQPAPSATA
FSFKSTATSGGFGASGFSGFGKSLLSSSSGATSASVLGTTVAAPTLHSGNTLFGQPANAS
GNNAALAPTIIPPSSATEKLFTPKTELSMEELKQFEAKKFTLGKIPLKPPPIELLSIQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagctctgcctcggtctgccgctacttcttgcagggcaactgccgttacgga
gacagatgctggtacctgcacccgcgccagcaagtcgggaggtccagccaagcctcttct
cagaacgcgggctccagcagacgagaagcatggagtggccataatgacagatacagtaat
gtccagacatccagtttctctaagccatcaaactggcacagcaacagagatcatggaaaa
tcatactttgggcaccaagctgcccaaggcttttctcaaaataggtttgctgcattaaac
tctagtgaaaatatcagtactgatggcactaaagatgatgaagaacaccttcttgaatta
ataatgaaagacatggagatttgggaatcttccggacaatggatgttttcttcctattct
ccattgaaagacaagtctaatatttcaggtttcccagcctttttaccagaagagttgcgc
cttgaatactataactgcagagcaaacaataatatacagaattatatcacttcagtccag
cagttagtaacccagtggagaagtagactgctagagttgaagcatatgaatgcatctact
aaaagtgtgctgaaatctgaacttaaaaaaacacctgttcaaccaccacctgcatttgga
tttggaggacagaacacatcagcttttggaacatcaaccttccctgtgaataatcaaagc
agtgctcaggccttctcttttaaagccccttcagaacttgcccaggtctccactggaagc
gctcctgcatttggaaacataacaaatgtgcagaatcatccagtgctgtctgcaaattct
tcctctactgcttcccattcagttggctttgggaaccaaccagctccatctgcaactgct
ttttcatttaaaagtactgcaacttctggtggatttggagcttctggattttcagggttt
ggaaaatctcttctttcaagttcttcaggagccacatctgcgtcagtgcttggtacaaca
gttgctgcccctactttgcattcagggaacacactgtttggacagcctgcaaatgcatct
ggaaataatgctgctttggcacctacaataatcccacccagctctgctacggaaaagtta
tttacgccaaagactgagctgtccatggaagagctgaaacaatttgaagcaaagaaattc
acactaggaaaaattcctttaaagccacctccaattgaactcttaagtatacagtga
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