Hemicordylus capensis (graceful crag lizard): 128332641
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Entry
128332641 CDS
T08891
Symbol
SAMD4B
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128332641 (SAMD4B)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128332641 (SAMD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
128332641
NCBI-ProteinID:
XP_053123151
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All DBs
Position
7:complement(28159743..28185037)
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AA seq
687 aa
AA seq
DB search
MMFRDQVGILAGWFKGWNECEQTVALLSLLKRISRTQARFLQLCLEHSLADCTEIHVLES
EANSAAIISQWHQEPKDKVVSLLLSHLPLLQPGNADAKSEYMKLLQKVLAYSIESNLFIE
ESRQLLSYALIHPATTLDDRNSLALWLNHLEERLSSGYSGQGRGRSDTAYHSRQGSDEWQ
GPVDAGLGDLGHSWQEKPPRENGHMSFHSSGSVPSAINSIGSNANTALPCQIHPSPLKRS
MSLIPTSQQVPSEWMSVDEMGARPAFIPSGEHAPLSPQSSVASSGSEQTEEQSGSRNTFQ
EDGSGMKDVPSWLKSLRLHKYAALFSQMTYEEMMTLTEQHLESQNVTKGARHKIALSIQK
LRERQSVLKSLEKDVLEGGNLWNALQELQQIIITPIKAFHALQATVASKEGQQLGAEQRG
APKLGLDKTSNGAEDKAPTADTFPPPSGSPCDGESGAAPVAEGDIAGQFTRVMGKVCTQL
LVSRPDEENITSYLQLIEKCLMHEAFTETQKKRLLSWKQQVLKLLRTFPRKAVLDIGYRP
QKGWAFGSNSLPIAGSVGVGVARRGQRQFQMPPRAIPPSRMGILSPAGIGGVSPRHALAS
PNLGSQGRQNLWFANPGGSNSMPGQSRSSVQRTHSLPVHTSPQAILMFPQDCQLPGTDLE
INPTLESLCLSMTEHALGDGTDKTSTI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggaccaggtgggcatccttgctggctggttcaaaggctggaatgaatgt
gagcagacagtagccctgctgtccctcctcaagcgcatctctcgcacccaagctcgcttt
ctgcagctgtgcctggagcactcgctggctgactgcaccgagatccatgtcctggagtct
gaggccaatagtgcagccatcatcagtcagtggcaccaagagccaaaggacaaagtcgtc
tccctgctcctctcccacctgccccttctccagcctggcaatgcggatgccaagtcagag
tacatgaagctcttgcagaaggtgctggcttactccatcgagagcaaccttttcattgag
gagagcaggcagcttctctcctacgcgctcatccatccagccaccacactggacgaccgc
aactccttggccctttggctcaaccacctcgaggaacgcctctccagcggctactccggc
caaggcaggggccgatccgacacagcctaccactcgcgacaaggttcggatgagtggcaa
ggtccggtggatgctggccttggggacctgggacacagctggcaggagaagccgcctcgg
gaaaatggacacatgtccttccactcctctggctcggtgccatcggccatcaacagtatt
gggagcaacgcaaacacagctctcccctgccaaatccaccccagcccgctgaagcgctcc
atgtccctcatccccaccagccagcaggtccccagtgagtggatgagtgtggatgagatg
ggtgcccggccagccttcatccccagcggagagcacgcacccctctcgccccagagcagc
gtggcctcctcaggcagcgagcagacggaggagcaatccggcagtcgcaacaccttccag
gaggatggcagtggcatgaaagatgttccctcatggctgaagagcctccgcctccacaaa
tatgcagccctcttctcccaaatgacctatgaagagatgatgaccctcacagagcagcac
ctagaatcgcagaatgtgaccaaaggagcaaggcacaaaatagccttgagtatccagaag
ctgcgggaaagacagagtgtcctgaagtctctggagaaggatgtcctagaaggcgggaac
ttgtggaatgccctccaggaactgcagcagatcatcatcacgcccatcaaggccttccat
gccctgcaggctacagtcgcatccaaggagggccagcagctgggggctgagcagcgcggt
gctcccaagctgggcctggacaagaccagcaacggtgctgaggacaaggcaccaacggct
gacaccttcccacccccatcaggctcaccgtgcgatggggagtcaggagcagcacctgtc
gccgaaggggacatcgcaggacagttcacccgggtgatgggcaaagtgtgtacgcagttg
ctggtgtcccggccagatgaggagaacatcaccagttacctccagctgatagagaagtgc
ctgatgcacgaggccttcacagagacacagaaaaagaggctcttgtcctggaagcagcaa
gtgctgaagctactccggacatttccgaggaaggccgtgctggatattggttaccgccca
cagaagggatgggcctttggttccaactctctccccatagctggatctgtgggggtgggg
gtggcgcgcagaggacagcggcagttccagatgcctcctcgtgccattcctccaagccgc
atggggatcctgagtcctgcggggatcggtggcgtctcccctcggcatgctctggccagt
ccaaacctggggagccaaggacggcagaatctgtggtttgccaaccctgggggcagtaac
agcatgcccggtcagagccgaagttcggtccagcgaacccattcgctccctgtccacaca
tccccacaggccatcctcatgttcccacaagattgccagctccctggaacagacctggag
atcaatcccacgctggagtcgctgtgcctcagcatgacggagcacgcgctgggcgatggc
accgacaaaacttccaccatctga
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