Hemicordylus capensis (graceful crag lizard): 128332649
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Entry
128332649 CDS
T08891
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04517
IgSF CAM signaling
hcg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128332649 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128332649 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hcg04812
]
128332649 (SPTBN4)
Cytoskeleton proteins [BR:
hcg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128332649 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
128332649 (SPTBN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_17
FKBP_N_2
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
128332649
NCBI-ProteinID:
XP_053123184
LinkDB
All DBs
Position
7:29437623..29489462
Genome browser
AA seq
2565 aa
AA seq
DB search
MANVTPAKLDNMEAQQQQQQQQQQQHNNPRWETAEHHHRPWDETTATAKLFECSRIKALA
DERDAVQKKTFTKWVNSHLAQVSCRISDLYTDLRDGFMLTKLLEVLSGEQLPKPTRGRMR
IHSLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDN
RETRSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHKHRPDIIDFRKLTKSN
ATFNLQQAFNTAEQQLGLAKLLDPEDVNMENPDEKSIITYVVSFYHYFSKMKALAVEGKR
IGKVLDQILEIEKIIERYESLASELLEWIELTIGIISNQKFANSLAGVQQQLQAFTAFCT
LEKPVKFQEKGNLEVLLFSIQSKLRANNRKLYVPREGRSISDINKAWARLEKAEHEREVA
LRNELIRQEKLELLAQRFDHKAVMRETWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEA
DISSYQERIQVVVELAQEMESEGYYDSKRINAQKHNILRQWGLLTDLVGARRSRLEQNLA
LQKVFQEMVYMIDWMDGMQAQLASKELGKHLSEVEDLLQKHSLLEADISAQSERVQALNA
AALKFSELAGYQPCDPQIICNRVNHVQSCLEQLQELASKRRKELEASRQLWSFFQEMEEA
EAWVREKERILSSSSSSQNYGKDLSSVAKLLSKHSILLGELGGRRSLLQSTMKRGEQTLL
RKRSGPGSIPEKIREVRLRWKKLEELAASHLQKLQGALRFHQFSADTDDLVAWLQDAYRL
VSSDDFGHDEHSTQSLVKKHKRVVEETDKHRAAVLALRKQLAALAPEYHELVEVQIRIVE
VEQLYGEVAEVAVLRRQWLQDALAVYRMFSEVNACEVWIDEKEQWLNRMDVPQELEGAEV
VQHRFESLDQEMNSLMGRILDVNQIVQQLVEGGHPSSSEVRACQDHLNSRWNRVVELVEQ
KKDHLSAILKIQNYLLECNEIKSQIREKRKAVESTQYNSSDLGSVLSLQHRLSAMEAALL
VLEPRLIELQQEGELLANTHPAQAMEILMQFEEISEEWEALKRVLQGCEDSLTVASRLQQ
FIQDLDSFLTWLVKTQAAAASEELPRNLLEAERLLSHHASLKEEINRYEEDYAKIQAVNE
VLALEEADLPYLSLQQWLQKLDVGWNKLLEMWENRREVLVQAHIFFLFVRDAKQAEVCLY
NQEMTLAQAKLPTTVEEAEQALKKHKDFTTTMELHLQKTTTALKAGESLIRQGNVYGQRV
REKMQFLQAKSQHNLQRAQDWRQRLSDHLELQRFLQNCHELDGWVAEKELLMAGEAPRDR
DHALQQPPPPRAPKRWLRHRAFMAELVQNKEWLRKIEKEGQQLIAEKPELAEIVRKKLGE
IRQCWAELESTTQAKAQQLLEATKADRLAQSYAELDKRLLHMESQLQAVDPGPDLASVNS
NLKKLQSMETQVEEWYKEVGELQAQVAALPLEAASKEMVGERQDTVGTRIVRLIEPLKER
RRILLASKEVHQVSHDLEDELIWVQDRLPLATLKDHGSNLQTVQQFIKKNQTLRREIQAH
KPRMEELLEHAGAVAGLKSPAVDEVRLLLEKLSALWAALQEETERRQQLLDTTYQVQQYC
FDVAEVEAWLSEQELFLMNEEKGKDEQSTLQLLKKHLMMEQTVENYAETIAQLSRQCRAL
LELGHPDSEQISRRQSQVDRLYVSLKDLVEEHKARLEQQYWLYQLNREVDELEHWIAEKE
VVAGSPELGQDYEHVTLLQEKFTEFASETGSLGSERILAVNQMVDELIDYGHADAATIAE
WKDGVNEAWADLLELMETRAQMLAASHELHKFFSDCKETLSQIEEKKQRLPEVAARESKA
SASTLQRLLSSFEHDVQVLVAQVRQLQEVAAQLRTVYAGENAEAIATKEQEVMRSWKELL
GSCEDCRLQITTTTDKIRFAGMVRDLISWMDTIICQIGTGEKPRDVSTVEVLMNYHQGLK
SEIETRNKNIAACVDLGKTLVLNKSPASEEIKLHLEKLMTKKKEMLTKWDQHWEWLQQML
EVHQFAQEAVVADAWLTAQEPLLKSRELGNSVDEVEQLLRRHEAFRKAAAAWEDRFSSLR
RLTTIEKLKAEQSKQPPTPLLGRKIFADPAELSSKAAALLRQPLYEKELLRGRLEGPPLL
NGAKPEALERAEAKVAYVRQELKPERLQPKLDRLQEGLGAAAEATAREAKGALEEAGRLE
RLAHPVGALVEQLEARGSRGEPHAERAPRERRLERQESVGEQAERRRERRLERRLERQES
GEQEAPWRERHERRLERQESSEQEAPRSDPKGGGKATLADIVEQLQEKESTVPAAAAAAA
APPATPRERDSPARLPNGLDMLPERTPRPDRPRARDRPKPRRRPRPKDPNAPPGEARRSR
SAPAQSSAPPPPPPTHSAQQEGYLLRKLELEGPNKKASNRSWVNLYCVLSKGELGFYKDS
KGRDTGSTHGNEPLLSLHNATSEVANNYKKKKFVLKIKTSDGGEFLLQAKDEEEMKTWLT
ALSTCVSEHSEISRWNQALLTTSSTDEGNPKREADRRASTSGRKK
NT seq
7698 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgtcacaccagccaagctggacaacatggaggcccagcagcagcagcagcag
cagcagcagcagcagcacaacaacccacggtgggagaccgctgagcatcaccaccggccc
tgggacgagaccacggctactgccaagctctttgagtgctctcggatcaaggctttagct
gatgagcgagatgccgtacagaagaagaccttcaccaaatgggtcaactcccacttggcc
caagtctcctgtcggatcagcgatctctacacggacctgcgggatggattcatgctgacc
aagctgctggaggtgctgtcaggagagcaactgcccaagcccacccgtgggcggatgagg
atccactccctggagaacgtggacaaggccctgcagttcctgaaggagcagcgggtccac
ctggagaacgtgggctcccatgacattgtcgacggcaaccaccggctcacactgggcctc
atctggaccatcatcctgagattccagatccaggtgatcaagattgaaacggaggacaac
agggagacgcgctccgccaaggatgctctgctgctctggtgccagatgaagacagcaggg
tacccggaggttaatatccagaacttcaccaccagctggagagatgggctggccttcaac
gcccttatccacaagcacaggccagatatcatcgacttcaggaagctcaccaaatccaat
gccaccttcaacctccagcaggccttcaataccgctgagcagcagctgggcctggccaaa
ctgctcgacccagaagatgttaacatggagaaccccgacgaaaagtccatcatcacgtac
gtcgtctccttctaccattacttctcgaagatgaaggccctggccgtggaggggaagcgg
atcgggaaggtgctggatcagatcctggagattgagaagatcatcgagcgttacgagtct
cttgcaagcgagttgctggagtggatcgagctcaccatcggcatcatcagcaaccagaag
tttgccaactccctggctggcgtccagcagcagctgcaggccttcactgccttctgtacc
ctggagaagccggtcaagttccaggagaaggggaacctggaggtcttgctcttctccatc
cagagcaagctgcgggccaacaaccgcaagctctacgtcccgagggaggggagaagcatc
tccgacatcaacaaggcctgggcccggctggagaaggccgagcacgagcgggaggtggcc
cttcgcaacgagctgatccggcaggagaagctggagctgctggcccagcgcttcgaccac
aaggccgtcatgcgggagacgtggctgaacgagaaccagcggctggtctcccaggacaac
tttggctacgacctgccggcggtggaggccgccatgaagaagcacgaggccatcgaggcg
gacatctcctcctaccaggagcgcatccaggtggtggtggagctggcccaggagatggag
tcggagggctattacgacagcaagcggatcaacgcccagaagcacaacatcctccgccag
tggggcctcctgacggacttggtgggcgcccggcgcagccggctggagcagaacctggcc
ctccagaaggtcttccaggagatggtctacatgattgactggatggacggaatgcaggcc
cagctggcatccaaggagctgggcaagcacctctcggaggtggaggacctgctgcagaaa
cacagcctgctggaagccgacatctctgcccagagcgagagagtgcaggccctcaacgcc
gctgccctcaagttctcggagctggccggctaccagccgtgtgacccccagatcatctgc
aaccgggtgaaccacgtccagagctgcctggagcagctgcaggaactggcctccaagcgg
cgcaaggagctggaggcctcccgccagctgtggtccttcttccaggagatggaggaggcc
gaggcctgggtgcgggagaaggagcgcatcctctcctcctcctcctcctcgcagaactac
ggcaaggacctcagcagcgtggccaagctgctgagcaagcacagcatcctcctgggcgag
ctgggtggccgccgctccttgctgcagagcaccatgaagcgaggggagcagaccctcctc
cggaagcgctccggccccggcagcatcccggagaagatccgggaggtgcggctgcgctgg
aagaagctggaggagctggcggcctcccacctgcagaagctgcagggggccctgcgcttc
caccagttcagcgcggacacggacgacctggtggcctggctgcaggacgcctaccgcctg
gtctccagcgacgactttggccacgacgagcactccacccagtcgctggtcaagaagcac
aagcgggtggtggaggagaccgacaagcaccgggccgccgtcctggccctccgcaagcag
ctggcggccctggcccccgagtaccacgagctcgtggaggtccagatccgcatcgtggag
gtggagcagctgtacggggaggtggccgaggtggccgtgctgcggcgccagtggctgcag
gacgcgctggccgtctaccgcatgttcagcgaggtcaacgcctgcgaggtctggatcgac
gagaaggagcagtggctgaaccgcatggacgtgccccaggagctggagggcgcagaggtg
gtgcagcacaggttcgaaagccttgaccaagagatgaacagcctgatgggtcggatcctg
gacgtcaaccagattgtgcagcagctggtcgagggaggccaccccagctcctctgaagtc
cgggcctgccaggaccacctcaacagcaggtggaaccgggtggtggagctggtggagcag
aagaaggaccacctcagtgccatcctgaagatccagaactacctgctggagtgcaacgag
atcaagtcccagatccgagagaagcgcaaggctgtcgagtccacccagtacaacagcagc
gacctgggcagcgtcctctccctccagcaccgcctctccgccatggaggctgccctgttg
gtgctggagccccggctgattgagctgcagcaggagggggagctcctggccaacacccac
cccgcgcaagccatggagatcttgatgcagttcgaggagatcagcgaggagtgggaggcc
ctgaagagggtcctgcagggctgcgaggattccctcaccgtggctagcaggctccagcag
ttcatccaggacctggacagcttcctgacgtggctggtgaagacccaggcagcagcggcc
tcggaagagctgcccaggaacctgctggaggccgagcggctgctgagccaccatgcctcc
ctcaaggaggagatcaaccgctacgaggaggactacgccaagatccaggcggtcaacgag
gtgctggccctggaggaggctgacctgccctacctctccctccagcagtggctgcagaag
ctggacgtcggctggaacaagctcctggagatgtgggagaaccggcgggaggtgctggtc
caggcacacatcttcttcctcttcgtgcgtgacgccaagcaggcggaagtctgtctgtac
aaccaggagatgaccctggcccaggccaagctgcccacgaccgtggaagaggcagagcag
gccctcaagaagcacaaggacttcacgacgaccatggagctgcacctgcagaagaccacc
acggccctcaaggctggcgagagcctcatccggcagggcaatgtctatggccagcgcgtg
agggagaaaatgcagttcctccaggcaaaaagccagcacaatctgcagcgggcccaagac
tggaggcagcgcctcagtgaccacctggagctgcagcgtttcctgcagaactgccacgag
ctcgatggctgggtggccgagaaggagctgctgatggccggcgaggcgccccgcgaccgg
gaccacgcgctgcagcagcctccgcctccgcgggcgcccaagcgatggctccgccaccgc
gccttcatggccgagctggtccagaataaggagtggctccgcaagatcgagaaggagggt
cagcagctgattgcggagaagccggagctggccgaaatcgtgaggaagaagctgggcgag
atccggcagtgctgggccgagctggagtccaccacgcaggccaaagcccagcagctcctg
gaggccaccaaggcagaccgtctggcgcagagctacgccgagctggacaagcggctgctc
cacatggagagtcagctgcaggccgtggaccccgggccggacctggccagtgtcaacagc
aacctcaagaagctccagagcatggagacacaggtggaggagtggtacaaggaagtgggg
gagctgcaggcccaggtggccgccttgcccctggaggccgccagcaaggagatggtgggc
gagcggcaggacaccgtcgggactcgcatcgtgcgcctcatcgagcccctcaaggagcgc
cggaggatcctgctggcttccaaggaggtgcaccaagtcagccacgacctggaggatgag
ctgatctgggtgcaggaccgcctgcccttggccaccctgaaggaccacgggagcaacctg
cagacggtccagcagttcatcaagaagaaccagaccctgcgccgggagatccaggcgcac
aagccccggatggaggagctgctggagcacgcgggggccgtggccggcctcaagagcccc
gccgtggacgaggtgcggctgctgctggagaagctctcggcgctctgggcggccctgcag
gaggagacggagcggcggcagcagctgctggacaccacctaccaggtgcagcagtactgc
ttcgacgtggccgaggtggaggcctggctgagcgaacaggagctcttcctgatgaacgag
gagaaaggcaaggacgagcagagcaccctgcagctgttgaagaagcacctgatgatggag
cagacggtggagaactacgccgagaccattgcccagctgtcgcgccagtgccgagccctg
ctggagctgggccaccccgacagcgagcagatcagcaggcgccagtctcaggtcgaccgg
ctgtacgtgtccctgaaggacctggtggaggagcacaaggcccgcctggagcagcagtac
tggctctaccagttgaaccgcgaggtggacgagctggagcactggatcgccgagaaggaa
gtggtggccggctcgccggagctggggcaggactacgagcacgtgacgctgctgcaggag
aagttcacggagtttgccagcgagacgggcagcctgggcagcgagaggatcctggccgtc
aaccagatggtggacgaactgattgactacgggcacgcagacgccgcgaccatcgccgag
tggaaggacggcgtgaacgaggcctgggcagacctgctggagctgatggagacgcgggcg
cagatgctggccgcctcccacgagctgcacaagttcttcagtgactgcaaggagaccctc
tcccagatcgaggagaagaagcagcgcttgcccgaggtggccgcccgcgagtccaaggcc
tcggccagcaccctgcagcggctgctgagctccttcgagcacgacgtccaggtcctggtg
gcgcaggtgcgccaactgcaggaggtggccgcccagctgcggacggtgtatgctggcgag
aacgcggaggccatcgccaccaaggagcaggaggtgatgcgctcctggaaggagctgctg
ggctcctgcgaagattgccggctgcagatcaccaccaccacggacaagatccgcttcgcc
ggcatggtgcgcgacctcatctcctggatggacaccatcatctgccagattggcacgggc
gagaagcccagggacgtgtcaacggtggaagtgctgatgaactaccaccagggcctgaag
agcgagattgagacccggaacaagaacatcgcggcctgtgtggacctggggaagaccctg
gttctgaacaagagcccggcctccgaggagatcaagctccacctggagaagctgatgacc
aagaagaaggagatgctcaccaagtgggaccagcactgggagtggctgcagcaaatgctg
gaggtccaccagtttgcccaggaggctgttgtggccgacgcgtggctcaccgcccaggag
ccactgctgaagagccgggaactgggcaacagcgtggacgaggtggagcagctcctccgg
cgccacgaggccttccgcaaagcggctgcggcttgggaggaccgcttcagctccctccgg
cggctcaccacgattgagaagctgaaggcggagcagagcaagcagccccccacgcccctg
ctgggccgcaagatcttcgcagaccccgcggagctgagcagcaaggcggccgcgctcctg
cgccagcccctctacgagaaggagctcctgcgggggcggctggagggcccgcccctcctc
aatggggccaagccagaggccctggagcgggccgaggccaaggtggcctacgtgcgccag
gagctgaagccggagcggctgcagcccaagctggaccgcctgcaggaggggttgggggcc
gcggccgaggccaccgcccgggaggccaagggcgccctggaggaggccggccggctggag
aggctggcgcaccctgtcggggccctggtggagcagctggaggccaggggcagccggggg
gagccccacgccgagagggccccccgcgagcgccggctggagcggcaggagtcggtgggc
gagcaggccgagcggcggcgggagcggcggctggagcggcggctggagcggcaggagtcg
ggcgagcaggaggccccgtggcgggagaggcacgagcggcggctggagcggcaggagtcc
agcgagcaggaggccccccgcagcgaccccaagggaggcggcaaggcaacgctggcagac
atcgtggagcagctgcaggagaaggagtcaacggtgccggcagcagcagcagcagcagcc
gccccaccagccacgccgcgtgaaagggactccccggcccgcctgcccaacggcctggac
atgctgcccgagaggacgccccgcccggaccggccccgggctcgggacaggcccaagcct
cgcaggcggccccggcccaaggaccccaacgcgcccccaggagaggcccgccggtcgcgc
tccgcccccgcccagagcagcgccccgccccctccgccccccacgcacagcgcccagcag
gagggctacctgctccggaagctggagctggaggggcccaacaagaaggcttccaaccgg
tcgtgggtcaacctgtactgcgtgctcagcaagggggagctgggcttctacaaggactcc
aaggggcgggacaccggcagcacccacggcaacgagcccctcctcagcctgcacaacgcc
accagcgaggtggccaacaactacaagaagaagaagtttgtgctcaagatcaagaccagc
gatggcggggagttcctcctgcaagccaaggacgaggaggagatgaagacctggctgaca
gctctgtccacctgcgtctccgagcacagcgagatttcccggtggaaccaggccctgctc
acgacctcctcgactgacgaaggcaaccccaagcgggaggccgaccgcagggccagcacc
tccggaaggaagaagtga
DBGET
integrated database retrieval system
