Hemicordylus capensis (graceful crag lizard): 128332905
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Entry
128332905 CDS
T08891
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128332905 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128332905 (ARID1A)
03021 Transcription machinery [BR:
hcg03021
]
128332905 (ARID1A)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128332905 (ARID1A)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
Helix-turn-helix
ARID
128332905 (ARID1A)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128332905 (ARID1A)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128332905 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
128332905
NCBI-ProteinID:
XP_053123686
LinkDB
All DBs
Position
7:11269640..11377245
Genome browser
AA seq
2276 aa
AA seq
DB search
MAAQVAPAAASSLGAPAPSELKKAEAQQQQQQRDCSSEEVGGEAVAAERGGEKPSESEGP
PGKELQDGAESNGGGAGAEPDLKSSNGNPGPRPVATLNNNLPEPPGGGGGGGSSNNSNDG
VGTPPQQQQQAPPQQQQQPPPSHPAALPPPGYGFGQPYGRGAQAAAAVAAAAAFHQHGGQ
QSPGMAALQSGGLEQPYSGPAGAPPGPPPPQNSHGGGSTEHGFPNHQYNSYYPAAGRSAG
AYPPPPQAYALSSPRGNAQSPAQAGAKPPVSAFQQQRFGAMGPAAAGGAGGGGGGGGATP
QPTSTPTLNQLLTSPSSARGYQGYPGADYGTGPQDSGATAKAPAAADIASPYSGGTSQGW
AAATGGGQQRSHHAPMSPGSSSAAGGQPLSRTQQPSSPMDQMGKMRPQPYGGNNPYAQQQ
GPQSGQQQGHGYPGQPYGPQTPQRYPMGTLSRTQSAMGGVAYAQQIPPYGQQGPSGYGQQ
SQTPYYNQQNPHPQQQQPSYAQQPPSQTPHTQPSYQQQQTQSQPSQLQSSQPPYSQQQSQ
PPHQQSPSPYPQQPATAQQHPQSQPPYTQQQSQSPYQQQQTQQSATSALSQQSASYPQSQ
SQQQTAYSQQRFPPPQELSQDSFGSQASSAASMTSSKGQEDVSLNLQSRPSSLPDLSGSI
DDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASV
AQSRSGPLSPAAVPGNQMPPRPPSGQSESILHPSMNQSTIAPDRGYIQRNPQMTQYNSPQ
PGSALSPRQSSGGQMHAGMGPYQQNSMGTYGPQGGQYGPQGGYPRQPNYNAMPNANYPSP
GMGGSMNPMGAGSQIHGQTGVPPYPGLPPGRMSHATMGNRPYGPNMANMPPQVGTGMCPP
PGGRKAQEAAAAAMHAAAVNSIQNRPSGYPNMNQGGMMATGPPYGQGINSMAGMLNPQGP
PYPMSGNMSNNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKAESKSKKSSSSTTTNE
KITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQ
VNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFATDSKKSQ
PKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQ
DAFPDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKGSDPFMSSGQ
GPNSGMGDPYNRATGPGMSNMAMGQRQHYPYGPYDRVRTEAGMGPEANLGTGTPQPNIMP
STPDSGMYSPSRYPQQPQQRHDSYGNQFSTQGTSSGSPFPSQQTNLYQPQQQNYKRAMDG
NYGPPAKRHEGELYSVPYSTGQGQAQQQLPPAQTQQPSQQQTAQPSPQQEIYNQYGNTYS
ATDRRPAAGPQNQFPFQFGRDRVSAPPGSGTQQNMPPQMMGGPIQSTPEGPQQGTIWQGR
NEMGYSYPNRQSTGSAPQGPTYHGVNRTDDMLHPDQRVNHEGPWPSHGNRQPPYGPSAPV
PPMTRPPQPNYQTPPSMQNHIPQVSSPAPLPRPVENRTSPSKSPFLHSGMKMQKAGPPVP
ASHITPAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTTKDIGTPEAWRVMMSLKSGLL
AESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQ
RTLLDPERFCKSSSPPPEEGAREEPWSPNCEEEEGEEEAAFANKAAAPLENNEEKLVSKF
DKLPVKIVQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKMELPLTH
KRASCNSVLRKRSVVESSPVAREGESPPSDGPPEKRITATMDDMLSARPGSLAEEEEVRN
VEATKESGKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLSKRCVCVSNIIR
SLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWW
WDCLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPN
AVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVV
LLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLMHMQNPSFEPTSVD
MMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6831 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtggcccccgccgccgctagcagcctaggagccccggctccatccgaa
ctgaagaaagcggaggcgcagcagcagcagcagcagcgggattgttcctcggaagaggtg
gggggcgaggcggtggcggcagagcgcggcggagagaagccgtcggaaagtgaaggtccc
ccgggaaaggaactgcaggacggggccgagagcaatggcgggggcgcaggggccgagccc
gacctgaagagctccaacgggaacccgggccctaggcccgtcgccacactgaacaataac
ctcccggagccgcccggcggtggtggtggcggcggcagcagcaacaacagcaacgacggg
gtggggacgccgccgcagcagcagcagcaggctccaccgcagcagcagcagcagcctccc
ccttctcatccggccgccttgcccccgccaggctacggtttcgggcagccctacggccga
ggcgcccaggcggcggcggccgttgctgcggccgctgccttccaccaacatggcggacaa
caaagccctggcatggcagcgctgcagagcgggggcctggagcagccgtactcggggccc
gcgggggcccctcctgggccgccccctccccagaactctcacggcggcgggagcacggag
cacggcttccccaaccaccagtacaactcctactaccctgcagccgggcgcagcgctggc
gcctacccgcctcctccacaggcctacgccctgagctccccccggggaaacgctcagagc
cccgcacaggccggcgccaagcctccggtatcggctttccagcagcagcgtttcggggcc
atggggccggcggcggctggcggcgcaggaggtggcggcggcggcgggggcgctacccct
caacccacgtcgacccccaccctcaaccaactcctcacctctcctagctcggcccggggc
taccaagggtaccctggggccgattacggcaccgggccccaggactcgggagccacggcc
aaggccccggcggcagcggacattgcctctccgtacagcgggggtaccagccagggctgg
gcagcagccacaggaggaggccaacaaaggagtcaccatgcgcccatgagccccgggagt
agtagcgctgccgggggacagccgcttagcaggacccagcagccatccagcccaatggat
cagatggggaagatgagacctcagccttatggaggaaacaacccatacgcacagcaacag
ggacctcagtcagggcaacagcaaggccatggatatccaggacagccgtatgggccacag
acaccccagagatatccaatgggaaccctaagcaggacgcaaagtgcaatgggtggtgtc
gcttatgcacagcagatccctccttacggacagcagggccctagtggatatgggcaacag
agccagactccctattacaaccagcaaaaccctcatccccagcagcagcagccttcatat
gctcagcagccaccatctcagacccctcacactcagccttcttatcagcagcaacaaact
cagtctcaaccttcacagcttcagtcatcccagcccccgtactcccagcagcagtcgcag
ccaccacatcagcagtctccatctccatatcctcagcagccagccactgcccagcagcat
ccacagagtcagcctccttacacgcagcagcagtcgcagtccccctaccagcagcagcaa
acccagcagtctgctacctcggcgctctctcagcagtcggcatcttaccctcagtctcag
tcacagcagcagacggcatattctcagcagcgcttcccacctccacaggaattatcacaa
gactcatttgggtcccaagcatcgtcggctgcctcaatgacttccagtaaagggcaagaa
gatgtgagtttaaatcttcagtcacggccctctagcttaccggatctctctggttcaata
gatgatctacctatgggtacagaaggagcactgagtcctggcgtaagcacatcagggatt
tcaagcagtcaaggagagcagagtaacccagctcagtctcctttctctccgcatacctct
cctcacctgccaggcatcagaggaccttccccttcacccgttggatctcctgctagtgtt
gctcagtcacgctctggtccactctctcctgctgcagtaccaggcaaccagatgccacct
cgaccacctagtggccaatcagagagcatcttgcatccctccatgaatcagtcaaccata
gccccagatagaggttacatacagaggaatccacagatgacccagtataattctcctcag
cctgggtctgccttatctccacgtcagtcttctggaggacagatgcatgctgggatggga
ccttatcagcaaaattccatgggcacttatggacctcaggggggccaatatgggcctcaa
ggtggatatccaaggcagccaaactacaatgctatgcccaatgcaaattaccccagccca
ggaatgggaggaagcatgaacccaatgggagcagggagtcagatccatggtcagactggt
gtaccaccctatcccgggctccctccagggagaatgagccatgccaccatggggaacagg
ccctatggacccaatatggcaaacatgcctccccaggtagggactggaatgtgtcctcca
cctggtggcaggaaagcacaagaagccgctgccgctgctatgcatgctgctgctgtcaac
tcgatccagaataggccgtctggttaccccaatatgaaccaaggaggaatgatggcaacg
gggcctccctacggccaaggaattaatagcatggctggcatgctaaatccccagggccca
ccatacccaatgagtgggaatatgtccaacaattctgcagggatggctgcaagtcctgag
atgatgggacttggggatgtaaaactaacacctgcaacaaaaatgaacaataaggcagat
gggacaccaaaagctgaatccaagtcaaagaagtccagctcctctactactacaaatgaa
aagattactaagctatatgagctgggtggtgagccagaaaggaagatgtgggtagatcgc
tatttggccttcactgaagagaaagcaatgggcatgaccaatcttccagctgtgggccgg
aaacccctagacctttatcgactctacgtttcagtaaaggaaattggaggactgactcaa
gttaacaaaaacaagaaatggcgtgagttagcaaccaatttgaatgtgggcacctctagc
agtgcagctagctctctgaagaagcagtatattcagtgtctctatgcctttgagtgcaag
attgagcgaggtgaagaccctcccccagacatctttgcaactgattcaaagaagtcacaa
cccaaaatacagcctccatctccagcgggttcaggctccatgcagggtcctcagacacct
cagtccaccagtagctctatggcagaaggaggagacttgaaacccccaactcctgcatct
acgccacacagtcaaatgccccctttgccaggcatcaggagtaactctgtaggccttcag
gatgcctttcccgatggcagtgaccccactttccagaagaggaactccatgactccaaac
ccagggtaccagcccagcatgaatacttccgacatgatgggccgcatgtcttatgagcca
aataaggatccatatggcagtatgagaaaaggaagtgatccctttatgtcctcagggcag
ggccccaacagtggtatgggtgatccttataatcgtgctacaggtccagggatgagtaac
atggccatgggacaaaggcaacattatccttatggcccttatgacagagtgagaactgaa
gcaggaatgggacctgaagccaacttgggaactggaacaccccagcctaacatcatgcct
tccactcctgattctgggatgtactctccaagccgctatcctcaacagccacagcagcga
catgattcctatggcaatcaattttccactcaaggtacatcctctggcagcccctttcct
agccaacaaaccaacttgtatcaaccacaacagcagaattacaaacgagcgatggatggc
aactacgggcccccagccaaacgtcatgaaggggagttgtacagtgtaccgtacagcaca
ggccagggacaagcccagcagcagctgcctccggcacagacccagcaaccaagccagcag
caaactgctcagccttccccgcagcaggaaatctataaccagtatggaaatacatactct
gctacagaccgccgacctgctgctgggccacagaaccagttcccattccagtttggtaga
gacagggtctccgctcccccaggctctggcacacagcagaatatgccccctcagatgatg
ggtggccctatccagtccactccagagggcccccagcagggcaccatttggcaggggcgc
aatgagatgggttacagttatcccaaccggcagagcacaggctctgcaccccaggggcct
acatatcacggcgtgaatcgaacagatgacatgctacatccagatcagagggttaatcac
gagggaccatggccttctcatggaaaccgtcaacctccttatggtccctcggccccggtg
cccccaatgacgaggcctccacagcccaactaccagaccccccctagcatgcagaatcac
attcctcaggtatctagtccagcacctcttcccaggccggtggaaaaccgcacctctcca
agtaaatcccctttcttgcactcgggaatgaagatgcagaaggcagggcctcctgtccct
gcctcacatataacaccagcagctgtccaacctcctatgatacgacgggatatcacattc
ccccctgggtctgtggaagcgacacagcctgtgctgaagcaaagacgacgtctgaccacg
aaagatattggaactcctgaagcatggagggtaatgatgtctctgaagtctgggctcctg
gctgaaagtacgtgggctttggataccataaacatcttgctctatgatgacaacagcata
atgaccttcaaccttagccagctgccagggttgttggaactactggtggaatattttcgg
cgttgcctgattgaaatatttggaatcttgaaggaatatgaggtgggagatccaggacaa
agaacactcttggatcctgagaggttctgcaagtcttcaagtcctcctcctgaagagggg
gcaagagaggagccatggagtcctaactgtgaggaagaagaaggggaggaggaggctgcc
tttgcaaataaagccgcagcacctcttgagaacaatgaggagaaacttgtcagtaaattt
gacaaacttccagtcaagatagtgcagaagaatgacccctttgtagtagattattcagac
aaacttggccgggtacaggagtttgagagtgggctgctacactggcgaattggtggggga
gacaccactgaacacattcaaacccactttgaaagcaaaatggagctgccgttgactcac
aaacgggcttcctgcaactcggttttgcggaaacgttctgtagttgagagcagcccagtt
gcccgagagggagaatcccctccatcagacggtcctccagagaaaagaataacagctacc
atggacgacatgctttcagcacgaccaggctcattggcggaggaggaggaggtcagaaat
gtggaggccaccaaggaaagcggcaagttcccgtttggcattagtccagcacagagccac
agaaacataaaaatcctggaggatgagcctcacagtaaggatgagacgcccctctgcacg
cttctagactggcaggactcgctgtctaaacgctgcgtctgtgtctcgaacatcatcagg
agtttatcatttgtgccaggcaatgacttcgagatgtctaaacaccctggcctgctgctg
attctagggaagctgattctcctgcaccataagcatccagaacgcaaacaggcaccactg
acatacgagaaggaagaggagcaggaccaaggagtgagctgcaacaaagtggagtggtgg
tgggactgcttggagatgctacgtgaaaacactttggtcacactggccaacatctctggt
cagctggacctgtcaccatacccagagagcatctgtttgcctatcctggatggactcctc
cattgggcagtgtgtccctcagcagaagcccaagatccttttccaaccctgggacctaat
gctgtcctctcccctcagagactggttttggaaactctcagcaagctcagcatccaggac
aacaatgtagatttgatccttgcaacgccaccgttcagtcgcttggagaaactctacagc
accatggtgcgtttccttagtgacagaaagaacccggtgtgccgagagatggctgtggta
ctactggccaacttggcacagggcgacagcttggcagctagagccattgccgtgcagaag
ggcagcattggcaacttgttaggcttcttagaggacagcctggcagccactcagttccag
cagagccaagccagtttgatgcacatgcaaaacccttcttttgagccgaccagtgtggac
atgatgcgtcgggcagctcgggcgttgctcgccctggccaaagtggacgagaaccactcg
gagttcacgttatacgagtcacggctgttggacatctccgtgtcacctttgatgaactcg
ttggtttcacaagttatttgtgacgtactgtttttaattggccagtcatga
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integrated database retrieval system
