Hemicordylus capensis (graceful crag lizard): 128333121
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Entry
128333121 CDS
T08891
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03015
mRNA surveillance pathway
hcg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128333121 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128333121 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128333121 (SYMPK)
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128333121 (SYMPK)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128333121 (SYMPK)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
128333121 (SYMPK)
U7-dependent histone pre-mRNA processing factors
128333121 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_MROH2B_C
PDS5
Adaptin_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
128333121
NCBI-ProteinID:
XP_053124189
LinkDB
All DBs
Position
7:26900453..26920650
Genome browser
AA seq
1305 aa
AA seq
DB search
MANVSSMGDTSLSRMSIASQFFAGEETTGIDTMTTSERVVDLLNQAALISNDSKITILKQ
VQELIINKDPTLLDNFLDEIIAFQADKSVEVRKFVIGFIEEACKRDTELLLKLIANLNML
LRDENVNVVKKAILAMTQLYKVALQWMVKSRVINDMQEACWEMVSAMASEIIQLLDSDND
GIRTHAIKFVEGLIITLSPRMPDSEVPKRHGNDVSLDRVPKDHPYIKYNVLWEEGKMALE
QLLKFMVHPAISSINLTAALGSLASIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSV
RKNLKLHLLSVLKHPASVEFQAQITTLLMDLGTQQAEIARNMPNLKELRKRPRDESDPTS
KKIKIEPSIGEDDEDKDLEQVAAPAPKPSIQVSTQSDTDITAEFLQPLLTPDNVANLVLI
SMVYLPENMPASFQATYTPVESAGTEVQIKHLARLMATQMTAAGLGPGVEQIKQAKEEVK
EEKMSKPESVLIKRRLSALNPGQAISVVGASGSVSPTITELGAPQAKRRPEPIIPSTQPR
LAGASGRKKIFRLSDVIKPLTDAQMDKLKLAAVKRILRSEKAVACSGAAHARVKILSSLV
TQFEVPLKSEVLSFILNDIRNRLDLAFAWLYQEYNAYLSQYPTGSPDNYDECLIGLLSGL
QEKPDQKDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQY
LHVLLDLSSHEKDKVRQQALLFIKRMYEKDQLREYVEKFALNYLQLLVHPNPPSVLFGAD
KDTEVAAPWTEETIKQCLYLYLALLPQNHKLIHELASVYTEAIADIKRTVLRVIEQPIRG
MGMNSPELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIP
VLNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSAVSPLNPGELLVALHNID
STKCDMKSIIKATNLCFGERNVYTSEVLAIVMQQLMEQSPLPMLLMRTVIQSLTMYPRLV
GFVMNILSRLISKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLSAVFEKCPELRE
PLLAHVRSFTPHQQAHIPNSTMAILEASNKQDLEGKELQPLEDVRGTAPPRNKGLRRERE
EEMEPQPLLPRVSQDMIALRLAQEKALKRQLEEEQKLKQQQARPALLPTPVPAEESMDFR
EEVPEAETPTIFISMQEEDESFGRESSLLDSSLEGPWPTKELQSKEGGATSSSDEGSLSK
VSTSKQASLSPEEPVKDTQPADTNSPSPLEEQPKPSLDQEKKADS
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtgagcagcatgggagacaccagcctctctcgcatgagcattgcctcccag
ttctttgctggggaggaaaccactggcatagacaccatgactacctcggagagggttgtg
gatttgttaaatcaagctgcattaatcagcaatgattcaaaaatcactatcctcaagcag
gtccaggaattaattataaacaaggatcccacattgctggataacttcttggatgagatc
attgccttccaggcagacaagtctgtcgaggtgcgaaagttcgtcatcgggttcatcgag
gaggcctgcaaacgggacacggaactgttgctcaagctcattgccaacctgaacatgctg
ctgagggatgagaatgtcaacgtggtgaagaaggctatcctggccatgacccagctgtac
aaggtggccctgcagtggatggtaaaatccagagttatcaacgacatgcaagaggcctgc
tgggagatggtgtctgccatggccagtgagatcatccagctgctggattcggacaacgat
gggatccgcacccatgccatcaagtttgtggaggggctaatcatcaccctctcaccccgc
atgcccgattcagaggtgcccaagcgtcacgggaatgacgtcagtctcgaccgagtcccg
aaggaccacccttacatcaaatacaatgttctgtgggaagaagggaagatggcgctagag
cagctactgaagttcatggtgcacccagccatctccagcatcaacctgactgcagcattg
ggctccttggcctccattgcccgccagcggcccatgttcatgtcggaggtgatccaggcc
tatgagacgctgcatgctaacctccctcccacgctggccaagtcccaggtgagcagcgtg
cggaagaacctcaagctccacctgctgagtgtcctgaagcaccctgcatccgtggagttc
caggcccagatcactaccctgctgatggacctgggcacacagcaggcggagattgcccgt
aacatgcccaacctgaaggagctgcgcaagcgcccgcgagatgagagtgaccctacctcg
aagaagatcaagatcgaaccatccattggggaggatgatgaggataaagacctggagcag
gtggccgccccagcccccaagccctctatccaggtcagcacgcaatccgacactgacatc
acggcagagtttctgcagccccttctgaccccagataacgttgctaacctggtgctcatc
agcatggtgtacctgcctgagaatatgcctgcttccttccaagcgacctacaccccagtg
gagtcagctggcactgaggtccagatcaaacatctggcccggctcatggccacccagatg
acagcagctgggctgggaccaggcgtggaacagatcaaacaggccaaggaggaggtgaaa
gaagagaaaatgtccaaacctgaaagtgtgctgatcaagcgacgcctgtctgccctcaac
cctggccaggccatctcagtggtgggcgcctcaggctctgtctctcccactataacggag
ctaggggcaccacaggccaaacggcgcccagaaccaatcattccatccacccaacccagg
ctggctggagccagtggccgcaagaagatctttcgcctgagtgatgtgatcaagcctctg
acagacgcgcagatggacaaactgaagctggcggccgtgaagcggatcctgcgttctgag
aaggcggtggcttgcagcggtgcggctcacgcccgggtgaagatcctctcctccctggtg
acccagtttgaggtcccgctgaagagtgaggtcctgagcttcatcctgaatgacatccgc
aaccgcctggatctggccttcgcctggctgtaccaggagtacaatgcctacctgagccaa
taccccaccggctcccccgacaactacgatgagtgtctcattggactgctctccggtctg
caggagaagcctgatcagaaggacggaatcttcaccaaggtggttcttgaggccccgctg
atcaccgagagcgccctggaagtgatccgaaagtactgtgaagatgagagccggacatac
ctgggcatgtcgactcttcgggacctgatttttaagcgcccatctaggcagttccagtac
ctgcatgttcttttggacctcagttcccacgagaaggataaggttcgccagcaggccctc
ctgttcatcaagcggatgtatgagaaggaccagctgcgggaatatgtggagaagtttgca
ctgaactacttgcagctcctggtccaccccaaccctccctctgtcctctttggagctgac
aaggatacagaggtggctgccccctggacagaagagactatcaagcagtgcctctacctc
tacctggccctccttccccagaaccacaaactcatccacgaactggcgtcggtgtacaca
gaggccattgctgacatcaagcgcactgtcctcagggtgatcgagcagccgatccgtggg
atgggaatgaactccccagagctgctactcttggtggaaaactgccccaaaggtgcagag
accctggtgactcgctgcctgcacagcctgacagataaagttcccccctctccagagctg
gtgaagcgagttcgagacctgtaccataagaggctcccagacgtccggttccttattcct
gtcctcaatggcttagaaaagaaagaggtgattcaggccctaccaaagctcatcaagttg
aaccccatagtggtgaaggaggttttcaaccgcctgctgggaacacaacatggtgaaggt
aactctgctgtctcccctctgaatcccggagaattgctggtcgcccttcacaacatcgat
tccaccaagtgtgacatgaagtccatcatcaaagccaccaacctgtgctttggtgagcgc
aacgtgtacacatcggaggtgctggccatagtgatgcagcagctgatggaacagagccct
ctgcccatgctgctcatgcggacggtgatccagtcgctgaccatgtacccacgcctggtg
ggcttcgtcatgaacatcctctcccgcctcatctcgaagcaggtgtggaagtatcccaag
gtctgggaaggcttcatcaagtgctgccagcgcaccaagccccagtctttccaagtcatc
ctccagttacctcctcagcagctcagcgctgtctttgagaagtgcccagagctgcgggag
cctctgctggcccacgtccgctccttcaccccacatcagcaagcccacatccccaattcc
acaatggccattctggaagccagcaacaagcaagacctggaagggaaggagctgcagcca
ctggaggatgtgaggggcactgcccctcccaggaacaagggattgagaagagaaagagag
gaggaaatggagccacagcctctcctgcctcgtgtctcccaggatatgattgccctgcgc
ttggcacaggaaaaggccctcaagcgccagctggaagaggagcagaagctcaagcagcag
caggcccgccccgccctcctgccgaccccagttcctgctgaggaatcgatggacttccgt
gaggaagtgcctgaagcagagactcccaccatcttcatcagcatgcaggaggaagatgag
agctttggcagagagagctccttgctagattccagcctggaggggccctggcccaccaag
gagctgcagagcaaagaaggaggagccaccagcagctcagatgaggggtccttgagcaag
gtgtccacaagcaagcaagcctctctctccccagaggagccggtgaaggacacgcagcca
gcggacacaaactcacctagcccgttagaggagcagccaaaacccagcttggatcaagaa
aaaaaggcagacagctga
DBGET
integrated database retrieval system
