Hemicordylus capensis (graceful crag lizard): 128333350
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Entry
128333350 CDS
T08891
Symbol
LRFN1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1 isoform X1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcg04515
]
128333350 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
128333350 (LRFN1)
Cell adhesion molecules [BR:
hcg04515
]
Immunoglobulin superfamily
SALM family
128333350 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128333350 (LRFN1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_1
LRR_5
ig
Ig_2
fn3
LRR_9
Ig_DSCAM-DSCAML_C
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
128333350
NCBI-ProteinID:
XP_053124749
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All DBs
Position
7:28297445..28349307
Genome browser
AA seq
804 aa
AA seq
DB search
MCPEACTTKRCVIAVIMCGAPAASEAFRGGSVSKRHVFVEKWASAGTVCANTMEKLFLPL
LMLGTMAEAQHCPGRCICQNISPTLTMLCAKTGLLFVPPSIDRRTVELRLTDNFITVIRR
KDFSNMTNLVHLTLSRNTISQILPFAFADLRALRALHMNSNRLAILKNEHFRGVGNLRHL
ILGNNQISHIEPSSFDEFLSTVEDLDLSYNNLETLPWEAIGQMVSLNTLTLDHNLIDNIA
EGTFSQLHKLVRLDMTSNRLQKLPPDNLFLRAQVLANVRGTHPSTLTISFGGNPLHCNCE
LLWLRRLTREDDLETCASPEHLMDKYFWSIPEEEFICEPPLITRQYSTKAFIMEGQGVVL
KCKAVGDPEPSIHWIAPDGKLIHNTTRTTIYDNGTLEVLITTLKDNGIFTCIASNAAGED
TAPVEICIVPLPLLVNNTGHMKEPDPGSSDITTSTKSGANDTKNHLDKKIVAADLTSTSV
IIHWPSERHIPGIRMYQIQYNSSLDDSLVYRMIPSSSKTFLVNDLAAGRDYDLCVLAVYD
DGVTSLTATRVVGCVQFTTEGEGAQCHSLHTQFLGGTMIIIIGGIIVASVLVFIIILMIR
YKVYSGQEEHKKAKVSNVYSQTNGSQPPAPAATALPHSASKLGEDKYETLQEVAPKEALL
SGDIKEDSPTCQDMALTEVDKRAVRMAVDLQTVAILSAEEGPLENSMTGSSVSLCLTKDT
GVGPQLRTKLGSSGAGVLPRELSRTHHHRHSFDGDYSLFQSHSYPRRARTKRHMSTSQLN
SEECPLSERRVTFSSTEWMLESTV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccagaagcatgcacaacaaagaggtgcgttattgctgttattatgtgtggagca
ccagcagcatctgaggcatttcgcggagggagcgtgagcaaaaggcacgtttttgttgaa
aagtgggcctcggcgggcacagtgtgtgccaataccatggaaaagctcttcctgcccctc
ctgatgcttggcaccatggcggaggctcaacattgccctggccgctgcatctgccagaac
atctccccgacgctgaccatgctgtgcgccaagacgggcctcctcttcgtgccgccctcc
atcgaccggcgcacggtggagctgcgcctgaccgacaacttcatcaccgtcatccgccgg
aaggacttctccaacatgaccaacctggtgcacctcaccctctcccgcaacaccatcagc
cagatcctgcccttcgcctttgccgacctgcgtgccttacgggccttgcacatgaacagc
aaccgcttggccatcctgaagaacgagcactttcgaggggtgggcaacctccggcacctc
atcctggggaacaaccagatcagccacatcgagccttcctcctttgacgagttcctctcc
acggtggaagacctcgacctctcctacaacaacctggagacgctgccgtgggaggccatc
ggccagatggtgagcctcaacacccttaccctggatcacaacctcattgacaacatcgcc
gagggcaccttctcccagctccacaagctggtgaggttggacatgacgtccaaccggcta
cagaagctgcccccggacaacctcttcttgagggcgcaagtgttggccaacgtccgaggg
actcacccttccaccttgacgatcagctttggaggcaaccccttgcactgcaattgtgag
cttctctggctccggaggctcacgagagaggatgacctggagacttgtgcctccccggag
cacttgatggataagtatttctggtcaatccccgaggaggagttcatctgcgaacctccc
cttatcactcgccaatattctaccaaggcattcatcatggagggccaaggggtcgtcctc
aagtgcaaagcagtgggtgacccggaaccttccattcattggattgcacccgacggcaag
ctgatccataacacgacccgcacgaccatctatgacaatggcaccctggaggtcctcatc
accaccttgaaggacaatggcatcttcacctgtattgcctccaatgccgctggagaggac
accgcccccgtggagatctgcattgtgcccctccccttactcgtcaacaacactggccac
atgaaagaacccgatcctgggtcctccgacatcaccacctccaccaaatccggtgccaat
gacaccaaaaaccacctggacaagaagatcgtggcagccgatctgacgtccacctcggtg
atcatccactggccctctgagagacacatccccggcatccggatgtaccagatccagtac
aacagttccctcgacgactccctggtttacagaatgatcccatcctccagcaagaccttc
ctagtgaatgacttagcggcaggccgagactacgacctgtgcgtcttggcggtctacgac
gacggggtgacgtccctcacagccacccgggtggtgggctgcgtgcagttcaccaccgag
ggggagggcgcccagtgccattcgctccacacccagttcctggggggcaccatgatcatc
atcatcgggggcatcatcgtggcctccgtcctcgtcttcatcatcatcctcatgatccgc
tacaaggtctacagtggccaagaggagcacaagaaagccaaagtcagcaacgtctactcg
cagaccaacgggagccagccgcccgcccctgccgccaccgccctgccccactcagcctcc
aagcttggggaggacaaatatgaaactctccaggaggtggcccccaaggaggccctgctc
agcggagacatcaaggaggacagccccacctgccaagacatggccttgactgaggtggac
aagagagcagtcaggatggctgtggacctccagactgtggccatcttgtctgctgaggaa
gggcccttggagaacagcatgaccggctcatcggtttccttgtgcctcaccaaggacacc
ggcgtggggccgcagctccgcaccaagttgggcagcagtggggcgggggtcttaccccgt
gagctgtcaaggactcaccaccaccgccactccttcgacggggattactccctcttccag
agtcatagctatccccgccgggcacggacaaaaagacacatgtccacctcccagttgaac
tcggaagagtgccccttgagtgagaggcgggtcacgtttagcagcacagaatggatgctg
gaaagcacagtgtga
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