Hemicordylus capensis (graceful crag lizard): 128333864
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Entry
128333864 CDS
T08891
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128333864 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcg03041
]
128333864 (USP39)
Spliceosome [BR:
hcg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
128333864 (USP39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
128333864
NCBI-ProteinID:
XP_053125871
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Position
8:complement(946602..957253)
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AA seq
633 aa
AA seq
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MDRERQVSLGEVAHAPDPIRGLLTRRRGIQSPPSPSRPKAETSLSRLRQRCAPRVRRGVG
RRSVSVEMSGGRVKRERDSRPPSSSSSRSSVASRIKQEPGEERGAATTRGSRGRAASAAA
AAAAVPVRVKREPDEEPRIKREPDEEVEDDDDEEPTVKYGRFDPEDRRSRHCPYLDTINK
SVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFY
CLPDNYEIIDSSLEDITYVLKPTFTKQHITNLDKQAKLSRAYDGTTYLPGIVGLNNIKAN
DYANAVLQALSNVPPLRNYFLEEENYKTIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAH
VSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHLALGGTKKKKKTIVTDVFQGSM
RIFTKKLPHPDLPAEEKEQLLQNDEYQEKMVESTFMYLTLDLPTAPLYKDEKEQLIIPQV
PLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNF
PITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPAEGAYRIHVLHHGTGKWYELQDLQ
VTDILPQMITLSEAYIQIWKRRDNEEETNQQGA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggatagagagagacaggtctctttgggagaagttgcgcatgcgccggatccgataagg
ggactgctaacacgcaggcgcggcattcagagtccgccctcgccgagtcgaccgaaagcg
gagacgtcgctttctcgtttacgacagagatgcgcgccgcgcgtgcgcagaggcgttggc
cgtcgttcagtttccgtggagatgtccggcgggcgggtgaagcgcgagcgggattcccgc
ccgccctcctcctcttcctcgcggagctcggtcgccagccgaatcaagcaagagcccggc
gaggagagaggcgccgccaccacccggggatccaggggccgggcggcctcggcagcagcg
gcggcggcggcggtcccggtgcgggtgaagcgggagcccgacgaggagccccgaataaaa
cgggagcccgacgaggaggtggaggacgacgacgacgaggagcccacggtgaagtatggc
cgatttgacccagaggaccggcggagcaggcactgcccatacttggacacgatcaacaag
agtgtcctggacttcgactttgagaagctgtgctcgatctcgctctcgcatatcaatgtc
tacgcttgtttggtgtgtgggaagtatttccagggtcggggcttgaagtcccatgcgtac
attcacagtgtccagttcagccatcacgtcttcctcaaccttcacaccctgaagttctac
tgtctgccagacaactatgaaatcattgactcttcccttgaggatatcacttatgttctg
aagcccaccttcactaagcagcacatcaccaacttggacaagcaggccaagctgtctcgt
gcctatgatggcaccacgtacctgcctggcattgttggactcaacaacatcaaagcgaat
gactacgcgaatgcagtactccaggcactgtctaatgtcccgcccctgcggaattatttc
ctggaagaggaaaactacaagaccatcaagcgccctccgggggacatcatgtttctgctg
gttcagaggttcggggagctcatgaggaagctgtggaatccccggaatttcaaagctcac
gtttctccccacgaaatgctgcaggcggtggtcctttgcagcaagaagaatttccagatc
accaagcaaggtgatggggttgactttctttcctggttcttgaatgccttgcatttggcc
ctgggtggcaccaagaagaagaagaaaaccatcgtgacggacgtcttccaaggctccatg
cggatattcaccaagaaactgccacaccctgacctgccagcagaggagaaggagcagctg
ctccagaatgatgagtaccaggagaaaatggtggagtcaaccttcatgtacctgaccctg
gacctgcccacggcccccctgtacaaggacgagaaggagcagctcatcatcccccaggtg
ccgctcttcaacatcctggccaagttcaacgggatcaccgagaaggagtataaaacctac
aaggagaacttcctcaagcgcttccagctcacgaagctgcctccttacctgatcttctgc
atcaagaggttcaccaagaacaacttctttgtggagaagaaccccaccattgtcaacttc
cccatcacgaatgtggatctccgggaatacttgtctgaggaagttcaagctgtgcataag
aacaccacctatgacctcattgcgaacatagtgcatgatgggaaaccggcagaaggggcc
tacaggattcacgtcttgcatcatggcacaggcaagtggtatgagctccaagatctgcaa
gtgacggacatcctcccgcaaatgatcacactctcggaggcctacatccagatctggaag
agacgggacaacgaagaagagaccaaccagcaaggggcttga
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