Hemicordylus capensis (graceful crag lizard): 128334256
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Entry
128334256 CDS
T08891
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcg03036
]
128334256 (CHD9)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128334256 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
128334256
NCBI-ProteinID:
XP_053126761
LinkDB
All DBs
Position
9:25112441..25194240
Genome browser
AA seq
2894 aa
AA seq
DB search
MTDPMMDFFDDANLFSDTLEGLSDDAFVQSGPVSLVDELNLGAEFEPLHIDSLNHVQETQ
TQQKMNEFEQLNQYDSLKLQVNQPYNSPAENVLSPHSEFNCSPIHPQSQTNGMFPDVADG
SPMWGHQTSSSVSNQNGSPFHQGHSQSMQQNKSFVAHHNFALFQASEQHRPCASLQSQQN
RNGINTGEDARSQSENFMEVNASVPHRTSVPHAPQAANLSNSQQSISVQSFSQTANDSPH
FCGNQEGNFDGHSPTITPCSVNNTHFSPPYSYSSNHISPTNLLQSSTALSTGQQTHALSD
FSGSNAFAPRTGTKQENTDNILNSSTSLNSNNFHVLHSVPPQGNFSSSKLSTVNISFPAP
AGSVPQMSHFSDPIEGNGFSSLDENLLHQVESQAESFTGLDPETLLQEDLLPHFESAFVQ
DSSSNELEHDLEHRVNPQVSKPPQFAQIQSQNCNHPWYSSGSNQHLQERKRINAQGQPPS
TKKTDGSGTYAKLQNTQVKAMSEKKQKKKVESESKQEKANRIISEAIAKAKERGERNIPR
VMSPENFPSVSAEGREEKKGRKVKSKPKDKESKKPKTGSSSKTKERAKIGKLIITLGKKQ
KRKNESSDEMSDAKQTPQQPFKDEASQKRRSNRQVKRKKYAEEGEGKQSEEEAKVPVKIK
KNSAPLPAEQPLQLFIENPSEEDAAIVDKILSSRIVKKEIPGGVMVEAEEFFVKYKNYSY
LHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYIEIDRVLEVSFCE
DKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQALRPDSRRLDRPPPNSW
KKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQSITFLYEILLT
GIRGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMVSRQMIQQYEMYFRDSQGRIIRG
TYKFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLT
GTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKED
VEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQTNVPNLVNTMMELRKCCN
HPYLIKGAEEKILGEFRETYSPTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFS
QMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGI
NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLG
LDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQR
RTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVI
DTPRIRKQTRPFSATKDELAELSDIESEGDDKPKLRRPCDRSSGYGRTECFRVEKNLLVY
GWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQT
RELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHCN
KVLLRVRMLYYLKQEVIGNDCQKVFEGVDASEIDIWVPEPDHSEVPAEWWDTEADKSLLI
GVFKHGYEKYNTIRADPALCFLERVGKPDDKAVAAEQRANDYIDGDVEDPEYKPAPAMFK
DDMEDDVSSPGDLIISDGDGQMVEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQIQQIQ
PAFPVQACVMQTQYEEAVLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDRGQFD
WTKFRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDELVDPNIFIQPITEERASRTL
YRIELLRKVREQAVRHPQLFERLKLCQPNPDLPVWWECGTHDWGLLIGAAKHGVSRTDYH
ILRDPELSFMSAQRNYSQNKVAFSRTSTPLLHQYQMALSASPLTPQTRLLDVKGSTLEDT
KVKNENHKEEPHSSGEESMSTEDIQIGVKTEPLSPKNGTPSHAADHKPIAKADSDRRMVA
ARTEPLTPNAASKKQRASKRGSESSSDSDSDSDRSSCSSRSSSSSSSSSSSCSRSRSGSS
SSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRGEGTPHLKSYDEESVASL
STVQDETQDSFQMNNGTPNSNCLFQGGYMLAASYWPKDRVMINRLDSICQTVLKGRWPST
RRSYDSNTVASFYTTKLLDSPGAAADYNEPSVPTPPSADVKEENDQSPQMSKVKKHVREK
EFTVKINDEGGLKLIFQKQGLSQKRPFENEDVTLGQQQYLARLHELQNASETSLASFPKS
LPESGTSSQSVTSANGIIVDDQPVVKKRRGRRKNVEGVDILFINRNKVPNHVCHGINVSQ
IAPGIGPVLPYAQSQGLCDSESPVPVINLKDGTRLAGDDAPKRKDLEKWLTEHPGYVEDL
GAFIPKTQLHEGRPKQKRHRCRNPNKLDINSLTGEERVQLINRRNARKVGGAFAPPLKDL
CRFLKENSEYGVAPEWADVVKQSGFLPESMFDRILTGPVVREEVSRRGRRPKSEIAKATA
AAAAAAATTTSVPVNPLLANGLLPGVDLSTLQALQQNLQNFQSLQVTAGLMGMPAGLNST
GEAKNMAAVFPMLLSGMAGLPNLLGMGGLLTKSAESLSEEKKGNDSREPDGKRERTESQN
AHNGGENSVSGSPSTSSAAAAAAASPLALNPLLLSNILYPGMLLTPGLNLHIPALSQSNI
FDVQNNENNGTGSAKPTEEMEENSRLQDQDDKGGTEPSSRNENSTDEGSEKADASSGSDS
TSSSSEDSDSSDED
NT seq
8685 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcctatgatggacttttttgatgatgccaacctctttagtgataccttagaa
gggttgtcagatgatgcctttgtacaaagtggacctgtttcacttgttgatgaattgaac
ttgggtgcagaatttgagcctttacacatcgactcattaaaccatgtgcaggaaacacaa
actcaacaaaagatgaatgaattcgaacagctaaatcagtatgattcactgaaacttcaa
gtaaaccagccctacaacagtccagctgaaaatgttttatcaccacactctgagtttaat
tgctcacccattcatccccaaagccaaaccaatgggatgtttcctgatgtggcagatgga
agccctatgtggggacaccaaacttctagcagtgtttctaaccagaatgggtctcctttt
caccaaggacattcacagtctatgcagcaaaataaaagttttgtagcacaccacaatttt
gccttatttcaggccagtgaacagcaccgtccgtgtgcctcattacagtcacagcaaaac
agaaatggcattaatacaggagaggacgctcggagtcagtcggaaaacttcatggaggtt
aatgcatctgttccacatagaaccagtgttcctcacgcacctcaagctgctaatctatca
aactcgcagcagtccatctccgttcagtctttttctcagactgcaaatgactcaccccac
ttctgtgggaatcaagaaggaaactttgatggacactctccaactataactccctgttct
gttaataatacacacttttctcctccttattcttattctagtaaccacatctctcctacc
aatctactacagtcttctacagctctttctactggtcagcaaactcatgcgttatctgac
ttttctggaagtaatgcctttgcacctcggacagggaccaagcaagaaaatacagataac
atccttaactcaagtacatctttgaattcaaataatttccatgtgttgcattcagtacct
cctcagggcaatttcagtagttcaaaactatcaacagtgaacattagttttcctgcccct
gctggctctgttcctcagatgagccatttcagtgatcctatagaaggcaatggcttttca
tctttggatgagaacttgcttcatcaagttgaatctcaagctgaatcatttacaggactg
gacccagaaactctcctccaggaagatctcctcccccattttgaatctgcatttgttcag
gacagttcaagtaatgagttagaacatgacctagaacatcgtgttaacccacaagtatca
aagccccctcagtttgctcagatacagtctcaaaattgcaatcatccctggtattcttct
ggctctaatcaacatctgcaagagcgaaagcgtataaatgctcaagggcagcccccttcc
accaagaaaacagatggttctgggacatatgctaagttgcagaatacccaggtgaaggca
atgtctgagaagaaacagaagaaaaaagtggaatctgaaagtaagcaggagaaagcgaat
cgcataatatcggaagcaatagcaaaagcaaaagagagaggggagagaaacattccacga
gtaatgagtccagaaaatttcccaagtgtttcagcagaaggaagagaagaaaagaagggt
agaaaggttaaatccaaaccaaaagacaaagaaagcaaaaaacccaaaactggctcttca
tccaaaactaaagagagagcaaaaattggcaagcttattattactctgggtaaaaagcag
aagagaaaaaatgaatcttcagatgaaatgtctgatgctaagcagactcctcagcagcca
ttcaaagatgaggcatctcagaaaagaagatcaaatcgacaagttaaaagaaagaaatat
gcagaagaaggtgaaggaaaacaatctgaggaggaagcaaaagtgcctgtgaaaattaaa
aagaattcagctcctttgcctgctgaacagcctctacaattatttatagagaatccaagt
gaagaagatgcagcaattgtagataaaattttatcatcgagaatcgtaaaaaaagaaatt
cctgggggagtgatggtggaagcagaagaattttttgttaaatacaaaaactactcttac
ctccattgtgaatgggccacagaacagcaacttttaaaggataaaagaatccagcagaaa
ataaaacgtttcaagctgaggcaagcacagagggcccatttttttgcagatatggaagaa
gaaccttttaatccagattatattgaaatagatcgggttttagaagtctccttttgtgaa
gataaggacactggagagcctgttacttattatttagtaaaatggtgctcgttaccatat
gaagacagcacatgggaactgaaagaagatgtagaccaagcaaaaattgaagaatttgaa
cagctgcaagctttaaggccagattcaagacgattggatcggccacctcctaattcatgg
aagaagatagaacagtccagggaatataaaaatggcaaccaactcagggaataccagctg
gaagggctcaactggctccttttcaactggtataatagacaaaactgcattttagcagat
gaaatgggtctaggcaaaaccatccagtcaataacattcctttatgaaatccttctgact
ggcataagagggcctttcctgattatagctccactttccaccatagccaactgggaaaga
gagttccgcacgtggacagatcttaatgtggtggtgtatcatgggagcatggttagcagg
cagatgatacaacagtatgaaatgtacttcagggactcgcagggccgtattattagaggt
acatataagtttcaggctatcatcaccacttttgaaatgattcttggtggctgtccagaa
ctcaatgcaattgaatggcgctgtgttattattgacgaagcacacagactgaagaataaa
aactgcaaacttctagagggtctcaaactcatgaatcttgagcacaaggtgttattgaca
ggcacaccactgcagaatacagtagaagaacttttcagcctccttcacttccttgaacct
ttacgctttccagcagaatctacattcatgcaggaatttggagaccttaagacagaggag
caggtgcaaaagttgcaagctattctgaaaccaatgatgctgagaaggctaaaagaagat
gtagaaaagaagttggctccaaaggaagaaactattattgaagtggagctaactaatatc
cagaagaaatactatcgagctattttagagaaaaactttgcatttttgtcaaaaggagca
ggccaaaccaatgtacccaacttagttaacactatgatggagctcaggaaatgctgcaat
cacccatatcttatcaaaggtgctgaggagaaaattctaggcgagtttagggagacctat
agtccaactgctcctgacttccatctgcaagcaatgatccagtctgctgggaaactagtc
ctcattgacaaacttcttccaaaaatgaaagcaggaggccacaaggtgctcatcttttct
cagatggtccgctgtcttgatattcttgaagattaccttatacataaaaggtacctatat
gagcgaatcgatggaagagtgagagggaacttgcgtcaagcagccattgatcgatttagc
aagccagattctgatcggtttgtgtttcttctgtgtaccagagctggtggattgggcatt
aatttaactgcagctgatacttgcataatttttgattctgactggaatcctcaaaatgat
ttacaggctcaagctcgctgccataggattggtcaaaacaaagctgtgaaagtctacaga
ctgataactcgtaactcttatgaaagagagatgtttgacagagcaagtctgaagcttggt
ctagataaggctgtcctacaaagcatgagtggaagagaaaatagtgttggtgggatccag
caactgtccaaaaaagaaattgaggacttgcttcgaagaggagcatatggtgccattatg
gatgaagaagatgagggtgctaaattctgtgaagaggatattgatcaaatcttgcaacgt
cgcacaaaaaccatcacaattgaatctgaagggagaggttcaacatttgctaaggctagt
tttgttgcatctggaaacaggacagatatttcattagatgaccccaacttctggcagaaa
tgggccaaaaaagcagaaatagacatagatgccatcagtggtagaaatagcctggttatt
gacactcccagaattaggaagcaaacaagaccattcagtgccacaaaagatgaacttgct
gaattatcggacattgaaagtgaaggggatgataaaccaaagcttcggaggccttgcgat
cgctccagtggatatggaagaacagaatgctttagggtggagaaaaacttgctagtttat
gggtggggtcgctggagagagattttgtcgcatggacgcttcaagaggcaactgaacgaa
caggatgtggagatcatttgccgagccctcctggcatactgtcttgttcactaccgagga
gatgaaaagataaaaagttttatatgggaccttatcacaccaactgaggatgggcaaaca
cgagagttacagaatcacctaggtttgtcagcccctgtccccagaggtcgaaaagggaag
aaagttaaaacgcaagccagcacttttgatatacataaagccgaatggcttcgaaagtat
aatccagaacatttgttgcaagatgatggctataaaaaacacataaaacaccactgcaac
aaggttttacttcgtgttagaatgctgtattatttgaaacaagaagtcattggtaatgat
tgccaaaaagtttttgaaggagttgatgctagtgaaattgatatttgggtacctgagcca
gaccattccgaggtgcctgcagagtggtgggatacagaagcagataaatctctactaata
ggagtttttaaacatggttatgaaaagtacaatacaattagagcagatccagcactgtgt
ttcttggaaagagtaggaaaacctgatgacaaagcagttgctgctgagcagagagccaat
gattatattgatggggatgtagaagatccagaatataaaccagccccagcaatgtttaaa
gatgacatggaggatgatgtgtcatcgccaggggacctcataatatcagatggagatggt
caaatggttgaaggggacaagctttattggccaactcagtctgccctaacaacacgcttg
cgtcgcctaataacagcatatcagcgtactagtaagaacaggcaaatccaacagatccaa
cctgcatttccagttcaggcctgtgtgatgcagactcagtatgaagaagctgttttaaat
ccaaaaatggctgccaaaattgaaagacagcaaagatggacaagaagagaagaagctgac
ttctacagagtggtttccacctttggtgtagtgtttgatcctgacagaggccaatttgat
tggacaaagtttagagccatggctagactacataagaaaacggatgagagcttagagaag
tacttgtatgcttttatggccatgtgccggagagtctgtcgtttgccttcaaaagatgaa
cttgtggatccaaacattttcatccagccaattacagaagaacgtgcatctcgaaccttg
tatcgcattgaacttctcaggaaggtccgagaacaagctgtccgtcatccacagctattt
gaacgattaaaactttgtcagccaaatccagacctgcctgtctggtgggagtgtgggact
catgattggggtttactgattggagctgcaaaacatggagttagcagaacggactaccac
atccttcgtgatcccgagctttcatttatgtcagcccagaggaactacagtcagaacaaa
gtagcattttcgaggacttctactccacttttgcatcagtatcagatggccttgtctgca
tctccgctcacacctcagacaaggctgctagatgttaaagggagcactcttgaagataca
aaagttaagaatgaaaaccataaagaagaacctcattcttcaggagaggagtctatgtct
actgaggatattcagataggagtaaagactgaacctctgagcccaaagaatggcacacca
tcacatgctgcagatcacaaacctattgcgaaggcagacagtgacaggcgtatggttgca
gcaagaacagagcccttaactcctaatgctgcttctaaaaaacaaagagcaagcaagaga
ggatcagaatctagctctgattcagactccgattcagacagatcatcctgttcttccaga
tcatcatcatcctcttcttcctcttcctcttcttgttcacgctccagatcaggatccagt
tcttcatcctcttcatcttgttcttcagcctcatcatcctcttcatcttcttcatcatca
tcgtcttcatcctcatcctcttcatctgaagagagtgacagtgatgaagaggaggcacaa
aagagaggagaaggaactcctcacttgaaatcgtatgatgaagagagcgttgcttcccta
agcactgtgcaggatgaaacccaggacagtttccaaatgaataatggaacaccaaattcc
aactgcctcttccaaggtggatatatgttggctgcttcctactggccaaaggatcgtgtt
atgattaaccgtctggatagtatttgtcaaacagtcttgaaaggtagatggccttcaacg
aggagaagttatgacagcaatactgtggcttctttctacaccactaagcttctagacagc
ccgggtgccgctgcagactataatgagcccagtgtaccaactcccccaagtgcagatgtt
aaagaagaaaatgatcagtcaccacagatgtcaaaggtgaagaagcatgtacgggaaaag
gagtttacagtgaaaatcaatgacgaaggtggtttgaaattaatttttcagaagcaggga
ctttctcagaaacggccatttgaaaatgaagatgtcacattaggacagcagcagtatctt
gccagactacatgaactccagaatgcttcagagactagccttgccagttttccaaagtct
ttgccagagtcaggaacttccagccagtcagtcactagtgcgaacggaataatagttgat
gaccagcctgtagtgaaaaagaggagaggaagaagaaagaatgtggaaggagttgatatc
ctgtttataaacagaaataaagtacctaaccacgtttgtcatggcattaatgtctctcag
attgctccaggaataggcccagtacttccatatgcacaatcccaaggcctatgtgattca
gaaagcccagttccagttattaacttgaaagatggaacgagacttgcaggtgatgatgcc
cccaaaagaaaagatttggagaaatggcttactgaacatcctggctatgttgaagattta
ggagcttttattcctaaaacgcagcttcatgaggggagaccgaaacaaaaaaggcatcgt
tgccgtaatcctaataaattggatattaatagccttactggggaagaacgtgttcaacta
atcaacagaaggaatgctagaaaggtagggggtgcttttgctccaccactgaaagatttg
tgcagattcctgaaagagaattctgaatatggagtagctcctgaatgggcagatgttgta
aaacaatcaggatttcttcctgaaagcatgtttgaccgtattctcaccgggcctgttgtg
cgagaagaagtcagcagaagagggaggaggcctaaaagtgaaattgccaaggcaacagca
gcagctgcagctgccgcagcaacaactacaagtgtaccagtcaaccctttgctagccaat
gggctactcccaggagtggatctgtctactcttcaggccttacagcagaacctgcagaac
ttccagtcgctacaagtgacagcaggtttaatgggaatgcctgctggcctgaacagtact
ggagaggctaaaaacatggctgctgtgtttcccatgctgctttcaggaatggctggatta
ccaaatttgctaggaatgggaggactcctaacaaagtctgcagaatctctgtccgaggaa
aaaaagggaaatgactctagagagcctgatggaaagagagaaaggacagagagccaaaat
gcacataatgggggagaaaactctgtgtcgggttctccttccacatcctccgctgctgct
gctgcagctgccagtcccttagctcttaaccccttactgttgtccaatatactttatcca
gggatgcttctcactccaggccttaatctccatatcccagctttgtcccaatctaatatt
tttgatgtacagaacaatgaaaataatggcacaggctcagctaagcctacagaagaaatg
gaggaaaattctaggcttcaggatcaagatgacaaagggggaacagagcctagctctcgc
aatgaaaacagcacagatgagggttcagagaaagctgatgcttcctcaggatcagacagt
acgtcttcctcgtctgaggattcagattctagtgatgaagactga
DBGET
integrated database retrieval system
