Hemicordylus capensis (graceful crag lizard): 128334285
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Entry
128334285 CDS
T08891
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128334285 (CTCF)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128334285 (CTCF)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128334285 (CTCF)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128334285 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
128334285
NCBI-ProteinID:
XP_053126873
LinkDB
All DBs
Position
9:complement(17399761..17433172)
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AA seq
729 aa
AA seq
DB search
MEGEAVETIGEESETFIKGKERKTYQRRREGGQEDDACPMPHNQADGTEVVQDVNSGVQM
VMMEQLDPTLLQMKTEVMEGAVQQEAEATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVSVPVATASVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCTGPDGVEGENGGEPKKGKRGRKR
KMRSKKEDSSDSEEENAEPELDDIEEEEEETAVEIEAEPEVEPVAPAPPPAKKRRGRPPG
KANQPKQPQPTAIIQVEDQNTGAIENIIVEVKKEPEAETVGATVGVQPAAVEAPNGDLTP
EMILSMMDR
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggaagcagttgaaactattggcgaggagtctgaaacttttattaaaggcaaa
gaaaggaagacttatcaaaggcgccgggagggtgggcaggaggacgatgcttgcccaatg
ccccataaccaggcagatgggactgaagtggtgcaggacgtcaacagtggcgtccagatg
gtgatgatggaacagctagacccaacgctgcttcagatgaagacagaggtcatggagggc
gctgtgcaacaggaagccgaggccactgtggacgacacccagatcataaccctacaggtt
gtgaacatggaagagcaacctataaaccttggcgaactccagcttgtccaagtgcccgtc
cctgtgtctgtacctgttgctactgcgtctgtagaagaacttcagggggcctatgaaaat
gaggtctccaaaggaggcctccaggagggggagcccatgatctgccacaccctcccgttg
cctgaaggcttccaagtggtaaaggttggtgcaaatggcgaggtggagacgctggagcaa
ggcgaacttcagcctcaggaagatcctaactggcagaaggacccagactatcaaccccca
gccaaaaagacaaagaaaaccaaaaagagcaaactccggtacacggaggaggggaaggac
gtggatgtgtctgtatatgactttgaagaggagcagcaggagggcctgctctcggaggtc
aatgcagagaaggtggtgggcaacatgaagccgcctaagccaacaaaaattaaaaagaaa
ggagtaaagaagacattccagtgtgaactgtgcagttatacttgtccacgccgttctaac
ctggaccgccacatgaaaagccacactgatgagaggccacacaagtgccacctctgtggt
agagccttccggacagtcacgctgctgagaaaccatctcaacactcacacaggtactcgt
cctcacaagtgcccggactgtgacatggcctttgtgacgagtggtgagttggttcggcat
cgccgctacaaacacacccatgagaagccattcaagtgttccatgtgcgactatgccagc
gtggaggtcagcaagttgaaacgccacattcgctctcacactggggagcgtccattccag
tgcagcttgtgcagctacgccagcagagacacttacaaactgaagaggcacatgaggacc
cattctggtgagaagccctatgagtgttacatttgccacgctcgcttcacccagagtggg
actatgaagatgcacatcctgcagaagcacactgagaatgtggccaagtttcactgccct
cactgtgacacagtcattgcacggaagagtgacctgggtgtccatttgcggaagcagcat
tcctatatcgagcagggcaagaagtgtcgctattgcgatgctgtgttccacgagcgatac
gcactcatccagcaccagaaatctcacaagaacgagaagcgtttcaagtgtgaccagtgt
gactatgcatgtcgacaggaacggcacatgatcatgcacaagcgaacccacactggagaa
aagccttacgcctgtagccattgtgataaaaccttccgccagaagcaactgctcgatatg
cacttcaagcgttaccatgaccctaattttgtcccagctgcctttgtctgctccaagtgt
ggcaaaacattcacccgccgtaacaccatggccagacatgcagataactgtacaggccca
gatggagtagaaggagagaacggaggggagcccaagaaagggaaacgtggccgaaagaga
aagatgcgctcaaagaaagaggactcctctgacagtgaagaggaaaacgcagagccagag
ttggatgacattgaggaggaggaggaggagacggcagtcgaaatagaggccgagccagag
gtggaacctgtcgctccagcaccgccaccggctaagaagcggagaggaaggccaccaggc
aaagccaaccaaccaaaacagccccagccaacagcaatcattcaggtggaagaccagaac
actggtgcaattgaaaacattatagtggaagtcaagaaggagccagaagcagagactgta
ggagccacagtgggagttcagccagctgcggtggaagcacccaacggggacctcacccca
gagatgatactcagcatgatggaccggtga
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