Hemicordylus capensis (graceful crag lizard): 128334295
Help
Entry
128334295 CDS
T08891
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hcg04812
]
128334295 (KATNB1)
Cytoskeleton proteins [BR:
hcg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
128334295 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
RMC1_N
eIF2A
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
PROPPIN
VPS8_N
WDR54
Beta-prop_IP5PC_F
Beta-prop_LRRK2
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
128334295
NCBI-ProteinID:
XP_053126897
LinkDB
All DBs
Position
9:1662955..1678190
Genome browser
AA seq
658 aa
AA seq
DB search
MAAAVVTKTAWKLQEITAHSSNVSSLVLGKSSSRLLATGGDDCRVNIWSVNKPNCIMSLT
GHTTPVESVKINTNEELIVAGSQSGSIRIWDLEAAKILRTLMGHKANICSLDFHPFGSFV
ASGSMDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASSSDDHTVKLWDLAAGK
IMFEFAGHVGPVNVVEFHPNEYLLASGSTDRTVRFWDLEKFQVVSCIEEDVAPVRCVLFN
PDGCCLYAGCQDTLRVYGWEPERCFDVVLVNWGKVADLSICNNQLIGVSFAQSTVSSFVV
DLSRVTKCGSGLHGLVRDDRPPVQPVPGGSSLRRIYDRPSTTCSKPQSRVKHNSESERRS
PSSDDDRDDKESTAEIQNPEDYKEIFQPKNSITRTPPCKSEPFPAPPEDEPMPAKEAPRP
SPAADLQKPSPSQEPPEPVQKPPVAPSAPPPKVEPPVIPAARNEPIGLKASDFLPAVKNQ
SLTEIVDEEAMSQIRKGHETMCVVLTSRHKNLDTVRAVWSTGDIKTSVDSAVAINDLSVV
VDLLNIVNQKASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL
AAPPSVGVDISREERLHKCRLCYKQLKNISNIIKNKSGLSGRHGSAFRELHLLMAILE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcagtggtcacgaagacggcctggaagctgcaggagatcaccgctcacagc
agcaatgtgtcttcccttgtgttgggcaagagttcgagccggctgctggcaacgggggga
gacgactgtcgggttaacatctggtcagtcaacaagcccaactgtattatgagtttgaca
ggtcacacaaccccagtggagagtgtgaagatcaacacaaacgaagagctgattgttgct
ggatcccagtcgggctccattcgcatctgggacctggaagctgccaaaattctccgtaca
ctaatgggccacaaagccaacatctgcagcctagacttccacccttttggaagctttgta
gcttcaggatccatggacaccaacattaaactttgggatgttagaagaaaaggttgtgtc
ttccggtacaagggccacacgcaggcagtccggtgcctccgcttcagtcctgatgggaag
tggctggcatcgtcgtcagatgaccacacggtgaagctgtgggatctggctgctgggaag
atcatgtttgagttcgctggacatgtgggaccagtgaatgtggttgaattccatcccaat
gaataccttttggcctccgggagcactgacagaacggtccggttctgggacctggagaag
ttccaggtggtgagctgcattgaagaagatgttgctcctgtcaggtgtgtgctgtttaac
cccgacggctgctgcctgtatgccggctgccaggacacgctgcgcgtctacggctgggag
cccgagcgctgcttcgacgtggttttggtgaactggggcaaagtggccgacctgtccatc
tgcaacaaccagctgattggtgtttcttttgcacaaagcacagtctcttcatttgtcgtg
gacctcagccgagtcacaaaatgtgggtccggcctccacggcctggtgagggatgacagg
cctcctgttcagccagtgcctggggggtcctccctccggcgcatctacgaccggccctcc
acaacgtgcagcaagccccaaagcagagtgaagcacaactctgagagcgagaggcgtagt
ccaagcagcgatgacgacagggatgacaaggaatccactgccgagatccagaaccccgag
gactacaaagagatcttccagccaaagaactccatcactcgaaccccaccctgcaagagt
gagcctttccccgcacctcccgaagatgagcccatgcctgcgaaagaagcaccaaggccc
agtccagcagcagatctccaaaagccgtcgccaagccaggagcctcctgaacccgttcag
aagccgccagtagccccctcagcccccccacccaaggtggagccccccgtgatccctgct
gccaggaacgagcctattgggctgaaggcctccgacttcttgccggctgtgaagaaccaa
agcctgacggagatcgtggacgaggaggccatgtcccagatccggaaaggccacgagacc
atgtgcgtggtgcttaccagtcgccacaagaacctggatacagtgagggctgtgtggagc
actggagacatcaagacatctgtggactctgctgtggccatcaatgacctttcggttgtc
gtggacctcctgaacattgtcaaccagaaggcatctctctggaagctggacctgtgcacc
gtcgtcttgcctcagatcgagaaacttctgcagagcaaatacgaaagttacgttcagacg
ggctgcacgtccctgaagctgatcctgcagaggtttctgcccctgatcaccgacatcctg
gctgcgccgccatccgtgggggtggacatcagcagagaggagaggctccacaaatgccgc
ctgtgctacaagcagctgaagaacatcagcaacatcatcaagaacaaatctggactcagc
ggccgccacggcagtgccttccgcgaactgcatctcctgatggccatcctggagtga
DBGET
integrated database retrieval system
