Hemicordylus capensis (graceful crag lizard): 128334316
Help
Entry
128334316 CDS
T08891
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128334316 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128334316 (SF3B3)
03041 Spliceosome [BR:
hcg03041
]
128334316 (SF3B3)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128334316 (SF3B3)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
128334316 (SF3B3)
Spliceosome [BR:
hcg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
128334316 (SF3B3)
Complex B
128334316 (SF3B3)
Complex C
U2 SnRNP specific factors
128334316 (SF3B3)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
128334316 (SF3B3)
TFTC complex
128334316 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
128334316
NCBI-ProteinID:
XP_053126955
LinkDB
All DBs
Position
9:798662..835434
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNLFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAVANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETEDDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGERGSV
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFANTA
DDWHVLVGVAKDLILNPRSVAGGFVYTYKLVNGGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRHENQ
LIIFADDTHPRWVTTACLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctttataacctcacgctgcagcgagccactggcatcagctacgcgatccatggc
aacttttcgggtaccaaacagcaagaaattgtggtttcccgagggaagatcttggagctg
ctccgccccgatccaaacaccgggaaggtccacaccttgctgacggtggaagtctttggg
atcatccgctccctcatggccttccggctgactggggggaccaaagactacattgtggtg
ggcagcgactccgggcgcattgtcatcctggagtaccagccctccaaaaacctctttgag
aagattcaccaggagacctttggcaagagcggctgccgcaggatcgtccctgggcagtac
ctggctgtggatccgaaggggcgagcggtcatgatcagtgccatcgagaaacagaagcta
gtatacattctgaacagagatgctgcagcccgactcaccatttcttccccgttagaagcc
cacaaggccaacaccttggtttaccatgtggtcggagtagatgtggggtttgaaaacccc
atgtttgcttgcctagaaatggattatgaggaagctgacaatgatcccacgggagaagcg
gtagccaacactcagcaaacgttgacattttacgagctggacctgggcttgaaccacgtg
gtcaggaaatacagcgagcccttggaggagcacggcaactttctcatcacagttcctgga
ggctccgatggtcccagtggggtgctaatctgttctgaaaactacatcacctacaaaaac
tttggcgaccaaccagatattcgatgtcccattcccaggagaaggaacgacttggacgac
cctgaaaggggcatgatctttgtctgctccgcgacgcacaagaccaagtccatgttcttc
ttcttggctcagacagagcagggggacatcttcaaaatcaccttggagactgaggacgac
atggtcacagagattcggctcaagtactttgacacagttcctgtcgctgctgccatgtgt
gtgctgaaaaccggattcctctttgtggcatctgagtttggaaaccattacctgtaccaa
atagctcacctgggagacgatgacgaggagcccgagttctcctctgcgatgcccctggag
gaaggggacactttcttcttccagccgcggcctctgaagaacctggtgctggtggatgag
ctggacagcctgtctcctatcttgtgctgccagatagcggatctcgctaacgaagatacc
ccccagctctatgtggcctgtggaagggggcctcggtcatctctgcgggtcctcaggcac
gggcttgaggtatctgaaatggccgtctcggagctgcctggtaaccccaacgctgtctgg
acagtgaggagacatgttgaagatgagtttgatgcctacatcattgtgtccttcgtcaac
gccaccctggtgctctctattggagaaacggtagaggaagtgacggactctgggtttctg
ggtaccacgcccactctgtcctgctcactgttgggtgatgatgctttggtgcaggtttat
cccgatggcatccggcacatccgagcagataagagagtgaatgagtggaaaacaccaggg
aagaaaaccattgtcaagtgtgctgtgaaccagaggcaggtggtgatcgccctgacggga
ggagaactggtctacttcgagatggacccatctgggcagctgaacgaatacacggagagg
aaggagatgtcggccgacgtcgtgtgcatgagcctggccaacgttccccctggagagcag
cgctcccgtttcctggccgtggggctggtggacaacaccgtccgcatcatttcgctcgac
ccctccgactgcctccagccgctgagcatgcaggctcttcctgcccagccggagtccttg
tgcattgtggaaatgggcggcgctgagaagcaggacgagctgggagagcggggctccgtc
ggcttcttgtacttgaacattggcctgcagaacggtgtgcttctgcggacggtccttgac
ccggtcaccggagacctctcggatacaaggaccaggtatcttggctcgcgcccggtgaag
ctcttccgcgtccggatgcagggccaagaagcggtcctggccatgtcgagtcggtcgtgg
ctgagttattcctaccagtcccgcttccatttgaccccgctttcctacgagacgctggag
tttgcctctggctttgcctctgagcagtgtccggagggcattgtcgccatctccacaaac
acgctgaggattttggcgttggagaagcttggagctgtgttcaaccaggttgccttcccg
ctgcagtacacccccaggaaatttgtgattcaccctgagagcaataacctgatcatcatt
gagactgaccacaatgcttatacggaggccactaaagcccaaaggaagcagcagatggcg
gaggaaatggtggaagccgctggggaagacgagagggagctggccgcagagatggcagct
gcatttctcaatgagaacctccctgagtccatctttggtgcccccaaggctgggaacggg
cagtgggcctcagtggtcagggtgatgaaccccatccagggcaacactctggatctcgtc
cagctggagcagaacgaagccgccttcagtgtggccgtgtgccgatttgccaacactgct
gatgactggcatgtcctggtgggagtggccaaggacctcatcctgaatccacgctcagtc
gctggaggcttcgtctacacctacaagctggtgaacggcggcgagaagcttgagttcctg
cacaagacccccgtggaggaagtgccggcagcaattgcccccttccagggccgcgtgctg
attggcgtggggaagttgctgcgggtctatgatctgggcaagaagaagctgctccgcaag
tgtgagaacaagcacattgccaactacatcagcgggatccagaccatcgggcacagggtg
attgtctccgatgtccaggagagcttcatctgggtgcgctacaagaggcacgagaaccag
ctcatcatctttgccgacgacacacacccccgctgggtcaccactgcctgcctcctggac
tatgacacggtggccggagccgacaagtttggcaacatctgtgtggtgaggctgcctccc
aacacaaacgacgaggttgacgaggacccaacgggcaacaaggctctgtgggacagagga
ctgctcaatggtgcctcccagaaggcagaggtgatcatgaactaccacgtcggagaaacg
gtgctgtcgctgcagaagacgactctgatccccgggggctccgagtcgctcgtctacacc
accctgtcgggaggcattggcatcctggtccccttcacatcgcacgaggatcacgacttc
ttccagcacgtggagatgcacctccggtcggagcaccctcctctctgcgggcgggaccac
ctcagtttccgctcctactacttccctgtcaagaacgtcattgacggggacctgtgtgag
cagttcaactccatggaacccaacaagcagaagaacgtctcggaagagctggacaggacc
ccgccggaggtgtccaagaagctggaggacatccgcacccgctatgccttctga
DBGET
integrated database retrieval system
