Hemicordylus capensis (graceful crag lizard): 128334374
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Entry
128334374 CDS
T08891
Symbol
GARRE1
Name
(RefSeq) granule associated Rac and RHOG effector protein 1 isoform X1
KO
K26671
granule associated Rac and RHOG effector protein 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128334374 (GARRE1)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128334374 (GARRE1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4745
Stu2_CTS
Motif
Other DBs
NCBI-GeneID:
128334374
NCBI-ProteinID:
XP_053127116
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All DBs
Position
9:1874293..1950492
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AA seq
1065 aa
AA seq
DB search
MQCFSAQESKMDYKRRFLLGGSKQKVQQHQQYPMPELGRTLSAPLASPATTSPLVSSAAA
GGCNHATPIADIQQGISKYLDALNVFCRASAFLTDLFSSVFRNSHYSKAAMQLKDVQEHV
MEAASRLTAAIKPEIAKMLMELSAGAANFKDQKEFSLQDIEVLGRCFLTVMQVHFQFLSQ
ALQKVQPVAHSCFTEAVAQERKNSSGVEMASSSPTAELEEALRSWRGAAEATSRLRERGC
DGSLAGIEVQQLFCSQSVVIPEHQLKELNLKIDSALQAYKAALESLGHCEYAMKAGFHLN
PKAIEASLQGCCSDAEAQQTGRRQTPSQPIQCELPTVPVQIGAHFLKGISFNESAADNLK
LKTHTMIQLIKEAGYHNGVTPRDDSPVTEILNQVCPSTWRGACKTAVQLLFGQAGLVVVD
TAQIENKEAYAPQISLEGSRIVVQVPSTWCLKEDPATMSLLQRSLDPEKTLGLVDVLYTA
VFDLNRWKEGREQALPCIQIQLQREICDFGSHSDLPPGNGSKSTGGLQKTFSKLTSRFTK
KTSCASSSSSGSYSIPSTPSKTLFIANNSEDKAKIPNNMDARLQSILNIGSFPRAPESGQ
QTQSPSNQIVNGFLLDRRDNSKVDDSKDAKGMNLPTDQEMQEVIDFLSGFNMGKSQQASP
QVKRRNSVASSSAAAEQKPVAVPQQPQSSSHTPLHHLQQGLSSQPPLPQKPQQQQQQQQM
QYYQHLLQPIGPQQQQQQQQQQQQQRPPGKWPPNASQQSAQTVGPGVSHMHQWSGHTFSD
LSSDLYSLGLVNSYMDNMMSEMLGQKPQGPRNNTWPNRDQSDGIFGMLGEFLPFDPAVGS
DPEFARYVAGVSQAMQQKRQAQHFRRPSNTRSNWPHSDDPHRTWPFPEYFTEGEMTSSWS
GTQGDSASSSDETSSANGDSLFSMFSGPDIVAAVKQRRKHSSGEQDPSTLPSPPLLSTVD
DHNQDNKTKTWPPKAPWQHPLPSQNMSLFQMSSPSSSQWNDTLQILQSPVWSTAQDCSPA
TGIPSTFAYAQQQPPPPPSQHKPMNKGFKPFPVKHERRPSYMHQY
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcttcagtgcacaggaaagtaaaatggactataagcggcgctttttgcttggc
gggtccaaacaaaaagtgcagcaacaccagcagtatccaatgccggagctaggcaggacc
ctgagcgcccctttagcatctccagccacgacatcccctctggtttcctcggctgctgct
ggcggctgcaaccatgctactccaatcgcagacatccagcagggaatctccaaatatctg
gatgcactcaatgtattttgccgtgcaagcgctttccttacagaccttttcagcagcgta
tttcggaactcgcactattctaaggcagctatgcaactgaaagacgtgcaggaacatgtc
atggaagcagcaagtcgactcacggcagcaataaaaccagaaatagcaaaaatgctcatg
gaactgagtgcgggagcggcaaactttaaagatcaaaaggagttcagcctacaggacatt
gaggtacttggacggtgtttcttgacagtgatgcaggttcattttcagtttttatcccaa
gctttgcagaaggtccaaccagtggctcactcatgtttcactgaagccgtagctcaggag
agaaagaattctagtggtgtggagatggccagttcaagtcccacagctgagctagaagaa
gctctgcggtcctggagaggagcagcagaggccacgtcccggctgcgggagagaggctgt
gatggctctctggctggaattgaggtccagcagctcttctgctcccagagtgtggtgatt
cctgagcaccagctaaaagaactgaacttgaaaatcgacagtgctttgcaggcatataaa
gcggcattggagagtttgggtcactgtgaatatgcgatgaaggccggctttcacttgaat
ccaaaggctattgaagcaagcttgcagggctgttgcagcgatgccgaagctcagcagact
ggccggagacagaccccttctcagccgattcagtgtgagcttccgacagttcctgttcag
ataggtgctcactttctgaaaggaatttcctttaatgagtctgcagcagataacctgaag
ctgaaaacgcacacgatgatacaactgatcaaagaagctggttaccataacggggtgacc
ccgagggatgactctcctgtgacggaaatactgaaccaggtttgcccttctacgtggcga
ggcgcatgcaagactgctgtgcagctgctctttggccaagctgggctggtggttgtggat
acagcgcagattgaaaacaaagaagcatatgcgccacagatcagtttggaaggttccaga
attgttgttcaagttccatcaacttggtgcctgaaagaagaccctgcaacaatgtctttg
ctgcagagaagcctggatccagagaagactttgggactggtggatgtgctctatactgca
gtgtttgacctaaatcggtggaaggaaggaagagagcaagctctgccctgcattcagatc
cagctgcagcgtgagatctgtgactttgggagtcatagcgacttgccgcctggaaacgga
agcaaatcgacaggcggcttgcaaaagactttctccaagttgacttcacggtttacaaag
aaaacttcctgtgcaagttcaagcagcagtggaagttactccattcccagtacaccttcc
aaaactctttttatagctaacaactcagaggataaagcaaaaatacccaacaacatggat
gcccgactgcaaagtatcctgaacatcgggagcttccccagggctccagaatcaggccag
cagacgcagagtcccagcaatcagattgtcaacgggtttctcctcgatcggcgtgacaac
agcaaagtggacgacagcaaggatgccaagggcatgaatttaccaaccgaccaagaaatg
caggaggtcatcgacttcctctctggcttcaatatgggcaagtcccagcaggcctctccc
caggtgaaaagaaggaactctgtggcctcatcctcggctgcagcagagcagaagccagtg
gctgtgccacagcagccgcagtcttcgtctcacacacctctgcaccaccttcagcagggc
ttgtcatcgcagccgccactgccacagaagccccagcagcagcagcagcagcagcaaatg
cagtactatcagcacctgcttcaacccattgggccccagcagcagcagcagcagcagcag
cagcagcagcagcagcgtccgcctggcaagtggccgcccaatgccagccagcagtcagcc
cagacggtgggcccgggggtgtctcatatgcaccagtggagcggccacaccttctctgac
ctgagctccgacttgtatagcttgggccttgtgaacagttacatggacaacatgatgtcg
gagatgttggggcagaaaccgcaaggccctagaaataacacgtggccaaatcgtgaccaa
agtgatggaatctttgggatgttgggagagtttctaccttttgaccctgcagtgggctcg
gatccagagttcgcccgctatgtcgctggggtcagccaggccatgcaacagaaaaggcaa
gcacagcacttccgtcgccccagcaacacacgtagcaactggcctcattctgacgaccct
caccggacctggcccttcccagagtatttcacagaaggggagatgacaagtagctggtca
gggactcagggcgactcagccagctccagtgacgagacctcctcagccaatggagacagc
ctgttttccatgttctcagggccagacattgttgctgcagtcaagcaaagaaggaaacac
agcagtggcgagcaagatccaagcacacttccttcccctccccttctctctacagtcgat
gatcataatcaggacaacaagaccaaaacctggcccccgaaagccccctggcagcacccc
ctgccaagccagaacatgtccttgttccagatgagcagcccctcctccagccagtggaac
gacaccctgcagatcctgcagtcccctgtctggtccacagcccaggactgcagcccagca
acagggattccctccacttttgcctacgcgcagcaacagccgcctccgccaccatctcag
cacaaaccgatgaataagggctttaaacctttcccagtcaagcacgaacgcaggccatcc
tacatgcaccagtactga
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