KEGG   Hemicordylus capensis (graceful crag lizard): 128334525
Entry
128334525         CDS       T08891                                 
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
hcg  Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hcg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    128334525 (EDC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcg03019]
    128334525 (EDC4)
Messenger RNA biogenesis [BR:hcg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     128334525 (EDC4)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     128334525 (EDC4)
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C WD40 WD40_WDHD1_1st Beta-prop_EDC4L Beta-prop_HPS5 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 Uteroglobin EIF3I
Other DBs
NCBI-GeneID: 128334525
NCBI-ProteinID: XP_053127401
LinkDB
Position
9:complement(16998076..17046205)
AA seq 1401 aa
MASASIDIEGATQHLRDILKLDRPGGSVNENQRPSSSYNGDLNGLLVPDPVAAVDGAPSA
KPVPQTVPLGTLQEKQVICLSGDDCSTCMVITAKDVEIVASSDSSITSKARGSNKVKIQP
VARYDWEQKYYYGNLIAVSNAYLAYAIRGASNGSAMVRVLSVSTAERTLLKGFTGGVADL
AFAHLNSNQLACLDEAGNLFVWRLAMKNGKIQEEILVNIKRPDETPLNSFRRIIWCPFIP
EENEESCDEGSQTLALLHEDRAEVWDLDIIRASHSSWPVEVTNVKEGFIVVKGHSTCLSE
GALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDP
EVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSIPPSLKACLDLSAEYLI
LSDVQRKVLYVMELVQNQEEGKAYFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEE
ESDGLNAEGTQGTGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDTAAPIPPHGSHE
DFAFPDHLADLGAEGLGSEKGSIHGSQPDLRRVSELSMPVDFLSPPNDMKPKLMTPDAFM
TPSTSLQQITVSPGSSISSLTAVTALSSSSANEPAIPRPAEDVSLSPKMQLDASLALSGS
SGSLQTSPRNHGVLLPGLPDKLTPKAPVSVSPGNPPLALERQEVEPLVPQSSPTRERSPD
VISSASTAMSQDIPEIASETLQRSFGVAPSVLPAEVLDPNHHADSMASAASALHLLSPRN
RHSSEHSHHSLDMAPAEVDMLTAPSLLEAALPQENVTVDPGVSQPWPAAPDITRETRNSI
ADSPRNDAVEQHKSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKAVAQR
LPVKDWKAKVSPRASPKLKRKGKKDDGSRDVTQSPRSFDQQVAPEYQDELMCLLRNQQRE
IVELRQNQRELMQRLTDHLDAVQSSLMGHIERVMDTQQEQEQRRLDQALAEGQQRSRQLQ
EHLSQQLSQSLSTAACNRLERTIREEMKKTVPPCISKTLDPVTGQLSNTIATKLTAIEGT
LKENVTKLVKSKNLTDAIARATADSLQGPMQSAYREAFQSVVLPAFEKSCQSMFQQINDT
FKQGTQEYIQQLETHMKNKKAREQEARDSLLGQLRQQVSAFQSTTDQLASTITASVHSEV
QHQLHVIVGNMQESILAQVQRVIKGEVSMAMKEQQAVVTSSIMQAMRSAAGTPIPATHLD
FQSQQAHVLQLLQQGHLHQAFQQALTAADLNLVLYVCETVDPQQVFGQHPCPLSQPVLLS
LIQQLSSDLGARTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQAEPHNT
LSKPARRLMIMLQGLVTPSMS
NT seq 4206 nt   +upstreamnt  +downstreamnt
atggcctccgccagcatcgacatcgagggcgcgactcagcacctgcgggatattctcaag
ctggaccggccgggcggttcagtgaatgaaaaccagagaccatccagttcctacaacgga
gacctgaatggcttgctggtgccagatcctgttgcagctgtagatggagctccttcggcc
aagccagttccccaaacagttcctttgggaacactgcaagagaagcaggtcatctgcctc
tctggagatgactgttccacttgtatggtgataaccgccaaagatgttgagatagtagcc
agcagcgactccagcatcaccagtaaagctagagggagcaacaaggtaaaaatccagcca
gtggccaggtatgattgggaacagaaatactactacggcaacctgatagctgtgtcaaat
gcctacctggcatatgccatcagaggtgccagcaatggctctgccatggtccgggtcttg
agtgtcagcacggctgagcggactctgctgaaaggcttcacaggtggtgtggcagacctg
gcttttgcccatcttaactccaatcagctggcttgcttggacgaagctggcaacctcttt
gtctggcgcctggccatgaaaaatgggaaaatccaagaggagattttggtgaacatcaag
cgaccagatgagactcctctgaacagcttccgcaggatcatatggtgtcccttcatccca
gaggagaatgaggagagctgtgacgaaggcagccaaactctggcactgttacatgaggat
cgggcagaggtttgggatcttgatataatccgagccagtcacagctcatggccagtggag
gtgactaacgtcaaagagggctttattgtggtgaaaggacacagcacatgcctgagtgag
ggagccctttccccagatggaactgtcctggccacagcaagccatgatggctatgtcaaa
ttctggcagatctacatagaagggcaggatgaaccaaggtgccttcatgaatggaaaccc
catgacggcagacccctctcctgcctcctcttctgtgacaaccataaaaagcaagaccca
gaagttcctttttggaggttccttattacaggagcagatcagaatcgagagctgaaaatg
tggtgcactgtatcgtggacctgtctgcagactgtccgattttctccagatatatttagc
tccatgagcatccctcccagcctgaaggcctgcctggatctctcagctgaatacctgata
ttgagtgatgtgcagagaaaggtcttgtatgtgatggaactggtgcagaaccaggaggag
ggcaaagcttatttcagctccatctcggagttcctcctgacccatcccgtcctgagcttc
ggcatccaggtggtcagccgctgccggctgaggcacacggaggtcctgccagcggaagag
gagagcgacggcctgaatgcagaaggcactcagggtaccggagctgttgaatcagctgca
ggcgtcctaatcaaactcttctgtgtccacaccaaggcccttcaggatgtacagatcagg
tttcagcctcttcatagtccagatacagctgctccaatacctccccatggctcccatgaa
gattttgcattccccgaccacctggctgatctgggtgcagaagggctgggatcagagaag
ggatccattcacggctcgcagcccgacttgcgtcgtgtttcggagttgtctatgcctgtg
gacttcctctcccctccaaatgacatgaaacccaagctgatgaccccagatgcattcatg
actcccagcacatccctgcaacagatcacagtgtcgcctggaagcagcatcagttccctc
acagcagtcaccgccttgagcagttcttcggccaacgagcccgccattcccaggcctgcc
gaagacgtgtctttgagcccaaagatgcagctggacgccagcctcgccctgagcggcagc
agtggaagtctgcagacgagtcctcggaaccatggagtcctcctccccggcctccccgat
aagctgaccccaaaggcccctgtctcagtttccccagggaatcctcctcttgctctggag
cgacaggaagtggaacctctggtgcctcagtcttccccaacccgcgagcgctccccggac
gtcatttcctcggcctcgactgccatgtcccaggacatcccggagatcgcatcggagacc
ctgcagcgcagctttggggtggccccctctgtgctcccggcggaggtcctggaccccaac
caccacgcagacagcatggcttctgcagcgtcagccttgcacttgttgtctccgcgcaac
cggcacagctcggagcacagccatcactccttggacatggcccctgccgaggtggacatg
ttgactgccccctcgctcctggaggcggccttacctcaggaaaacgtgactgtggacccg
ggtgtgagccagccctggccagctgccccggacatcaccagagagaccaggaacagcata
gcagacagccccaggaatgatgccgtagagcagcacaagagctcttaccacaggcacagc
taccacctcctacagcacgacagtcaggatgccagtgctgagcaaagcgatcacgatgac
gaagttgccagcttggcttctacgtcgggtggctttggtgccaaagcagttgcacagcgc
ttgcctgtgaaggactggaaggccaaggtgtcccctcgcgcatccccgaaactcaagcgg
aaggggaagaaagacgacggttccagggatgtgacacagtccccgcgatcctttgaccag
caggttgctcctgagtaccaggacgagctgatgtgtctgctgaggaaccagcagagagag
attgtggagctgaggcagaaccagagggagctgatgcagaggctcaccgaccacctggac
gctgtgcagagctccctgatgggtcacatcgagcgagtgatggacacccagcaagagcag
gagcagcggaggctggaccaggccctagctgagggacagcagcgcagtcggcaactgcag
gagcacctgtcccagcagctgtcccagtccctctccacggctgcctgcaatcggctggag
aggaccatccgcgaggagatgaagaagaccgtgcctccgtgcatttccaagaccttggat
cctgtcactgggcagctgagtaacaccattgcaaccaagcttacagccattgaggggacg
ctgaaggagaatgtcaccaagctggtgaaatccaagaaccttactgatgccattgcccgg
gcaactgctgactccttgcaaggccccatgcaatctgcataccgggaggcgtttcagagt
gtggtgctgcctgcctttgagaagagctgtcagtccatgttccagcagatcaatgacacc
ttcaagcaaggcacgcaggaatatatacagcagctggagacccacatgaagaacaagaaa
gctcgagagcaggaagcccgggactctctgctgggccagctccggcagcaggtcagcgcc
ttccagagcaccaccgaccagctggcgtccaccattacggccagtgtgcactccgaggtg
cagcatcagctccatgtcattgtgggcaacatgcaagagtccatcctggcccaggtacag
cgggtgatcaagggagaggtgagcatggccatgaaggaacagcaggccgttgtcacctcc
agcatcatgcaggccatgcgctcggcggctggcacccccatccctgccacccacctcgac
ttccagtcgcagcaggcgcatgtgctgcagctgttgcagcagggacatctgcaccaagcc
ttccagcaggcactcacagcagccgatttgaacctggtcctctacgtctgtgaaacagta
gaccctcagcaagtgtttgggcagcacccctgccctctgtcccagcctgtcctcctgtct
ctcatccagcagctttcctcagacttgggagcccggacggagctgaagttgaactacctg
gaggaggccgtgatgcacctcgaccacagcgaccccatcacccgcgaccacatgggctca
gtgatgaaccaagtgcggcagaagctcttccagttcctgcaggcggagcctcacaacacc
ctgagcaagcccgcccgccgcctcatgatcatgctccaaggcttggtcactcccagcatg
tcctaa

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