Hemicordylus capensis (graceful crag lizard): 128334782
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Entry
128334782 CDS
T08891
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128334782 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
128334782 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
hcg04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
128334782 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
PLAC
TSP1_spondin
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
128334782
NCBI-ProteinID:
XP_053127961
LinkDB
All DBs
Position
10:complement(24706102..25141478)
Genome browser
AA seq
1032 aa
AA seq
DB search
MLDNFKGSLRLLSSIVVLGFQLVIPQPSIEHRKVPQRIEEQNAAPEEDNAGIPGVWGSWG
PWSACSRSCSGGVMEQTRPCLPGYYYERSYHRPGQFSASERTLPHQQPQHQEEPLTPFSG
HVISAIRTSVPLHKQEQQLPRGGLRAGVSSAGRNDSHLSRGTSRGGRLSQSRRRSPKPER
RGRNKNPIGPGKYGYGKVPYILPLQTDTGQLPSKPRRQRQSPRNTANPQSAGVVENPFGH
SANPSHHHGNLYQEDRRAQPRSQVTSGSFYQQAAPHLQVFPASQSLFHGTDLSAHVPVSH
QPVQSHTPSQRTSAIVCTGAYKQYKLCNTNACPENRSIREVQCASYNNKPFMGRFYEWEP
FVEVKGSQKCELNCRAVGYRFYVRQAEKVIDGTPCDQNGTSICVSGQCKSIGCDDYLGSD
KVVDKCGICGGDNTACKVISGVFKHTLTNLGYHKIVEIPEGATKINITEMSKSNNYLALR
SQSGRSIINGNWAIDRPGRYEGGGTMFTYKRPNEISSTAGESFLADGPTNEILDVYMIHQ
QPNPGIHYEYIIPGPNVISPQVPLHRLPGEPFNGQLDVSETVNYEEADLHREIGTHVGQP
VGNFPVIKPGRFPSHQPNNQVSAGQPPRRNREHNWKQVGMTECTTTCGKGSQYPIFHCVN
RNTHEEVSESYCDTSTKPTPEEEACNIFPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQI
YANRTLTVQPYRCHHLEKPETTSTCQLKICSEWQIRTEWTSCSVPCGVGQRTRDVKCVSN
LGDVVDDEECNMKLRPIDIENCDMGPCAKSWFLTEWSDRCSAECGAGVRTRSVVCMTNHI
SSLPLEGCGHNRPLETTPCDNGPCLGKVEWFAGSWSQCSIECGTGTQQREVICIRKTENS
FDMLNPYECSFLERPPSQQNCYLKPCGAKWFSTEWSTCSKSCEGGFRVREVRCLSDDMTP
SPKCDPQLKPEEKEQCNTQDCIPEIDENCKDKYYNCNVVVQARLCVYTYYKTACCASCLR
VANRLSGLLGRR
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgctagacaattttaaaggttctttaaggcttctcagttccatagtggtgcttggattt
cagcttgtcattccgcagccctccatcgaacacagaaaggttccacaaaggatagaagag
cagaacgctgctccagaagaagacaatgcaggaattccaggtgtgtggggcagctggggt
ccctggtcggcttgttccaggagctgcagtggtggggtgatggaacaaacaaggccttgt
cttccgggatattattatgagagaagctatcacaggccaggacagttttctgcttctgaa
aggactcttcctcatcagcagccccagcaccaggaagagccgctgactccattctctggg
catgtcatctctgccatccgcacatcagttcctcttcacaagcaggagcagcagctgccc
cgaggaggcctccgggctggagtctcctccgcaggccgtaacgacagccatttgagcaga
gggacctccagaggaggccggctttctcagtctcggaggcgtagccccaaaccggagaga
aggggcaggaataaaaaccctattggccctgggaaatatggatatgggaaagtgccctat
atactacccttgcagactgacacgggacaattgccaagcaagccacggaggcagcggcag
tctccacgcaacaccgccaacccacagagtgctggtgttgttgagaacccatttggtcac
tcggccaacccctcacatcatcatggaaatctgtaccaggaagatcgcagagctcaaccc
aggtctcaagttaccagtggctccttctaccaacaggctgcgccccatctgcaagttttc
ccagcatctcaaagtttgtttcatggtactgacttgagtgcgcatgttcctgtatcccac
cagccagtccaaagccacactccctctcaaagaacatcggcgattgtgtgcactggagct
tacaagcagtacaaactctgcaacacaaatgcatgtcctgaaaacagaagcatccgggaa
gtgcaatgtgcatcatacaacaacaagccttttatgggtcgattctatgagtgggaaccc
ttcgtggaagttaaaggcagtcagaaatgtgaactcaattgccgagcagtaggctaccga
ttctatgtccggcaagcagaaaaggtcattgatgggacgccatgcgaccaaaatggaacc
tcgatctgtgtatctgggcagtgcaagagtattggctgcgatgactaccttggttcagac
aaggtggtggacaaatgtggaatatgcggaggggacaacacagcttgcaaagtcatctct
ggagtcttcaagcacaccctgaccaacctcggttaccacaaaatcgtggaaatcccagag
ggtgccacaaaaatcaacattacagaaatgtccaagagcaacaactacttagcactgcgg
agtcagtcggggagatctattatcaacggcaactgggcaattgatcgacctggaagatac
gagggaggtggaaccatgttcacatacaaacgtcccaatgaaatctcaagtactgctggg
gaatcctttttggcagatggcccaaccaatgaaatcttggacgtttatatgattcatcag
cagcctaatccaggcatacattatgagtatataattccagggcccaatgtcattagtcct
caggtgcctcttcacagactgccaggagagcctttcaatggccagttagatgtgagcgag
actgtgaattatgaggaggcagatttgcatagggaaataggcacgcacgtggggcagcct
gtggggaacttccccgtgatcaagccaggaagatttccctctcatcagccaaacaaccag
gtgtctgctggtcaacccccaaggcgtaaccgagagcacaactggaagcaagttggaatg
actgaatgcaccaccacttgtgggaaagggtcacagtatcccatcttccactgtgtgaac
agaaatactcatgaggaggtatctgagagctactgtgacaccagcaccaagcccacgcca
gaagaggaagcttgtaacattttcccatgcccagccttctgggatataggggagtggtca
gaatgcagcaagacctgtgggctaggcatgcagcaccgccaagtcctgtgccgtcagatc
tacgccaaccgcaccctgacggtccagccgtaccgctgccatcacctggagaaaccggag
acaacaagtacgtgccagctgaagatctgcagcgaatggcaaattcggacagaatggaca
tcgtgttcggtgccatgcggcgtgggccagaggacccgagatgtcaagtgtgtcagtaac
cttggagatgttgtggacgatgaagagtgcaacatgaaactgcgccccattgacattgag
aactgtgacatggggccctgtgccaaaagctggttcctcacagaatggagcgacaggtgt
tctgcagaatgtggcgcaggtgtccgaacacgctcggtcgtgtgcatgaccaaccacatc
agcagcctgccactggagggctgtgggcacaacagacccttggaaacgaccccttgtgac
aatgggccatgtttggggaaagtggagtggtttgctgggagctggagccagtgttcaatt
gaatgtggcactggaacccagcagagagaagtgatttgcattcgcaagactgaaaatagc
tttgatatgctgaatccctatgagtgctcttttttggaaagacctcccagccagcagaac
tgctacctcaagccttgtggcgcaaaatggttcagtactgaatggagcacttgctcaaaa
tcgtgtgaaggcggtttccgggtccgagaggtacgctgtctttccgatgacatgacgccg
agccccaaatgtgacccacagctgaagccagaggaaaaggagcaatgcaacactcaggac
tgcatccccgaaatagacgaaaactgcaaagacaaatattacaactgcaatgtggtggtg
caagcccgtctgtgcgtctacacgtactacaagactgcgtgctgcgcgtcctgcttgcga
gtggccaacaggctgtcagggctcctggggcgcagataa
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