Hemicordylus capensis (graceful crag lizard): 128334986
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Entry
128334986 CDS
T08891
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128334986 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcg03036
]
128334986 (SIN3A)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
128334986 (SIN3A)
REST complex
128334986 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128334986 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
CPDase
Motif
Other DBs
NCBI-GeneID:
128334986
NCBI-ProteinID:
XP_053128640
LinkDB
All DBs
Position
10:23498461..23542115
Genome browser
AA seq
1272 aa
AA seq
DB search
MKRRLEDQESPVYASQQRRIASNTEPFQHQHRMLAPAPPVYESVPETMQSAAGIQYSVTP
NYQVSTVPQSSSSHGPALAAVHSGHHHPTPVQPHGSQVVPSHAHPTPPAAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPQHPSQPSAQSAPTPAQ
PAPQPPPAKINKPSQLQTHTPTSQQTPPLPYASPRSPPVQPHTPVTISLGTTPSLQNNQP
VEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQ
VARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNSKQQRPN
QNGCQIRRHATAGTTPPVKKKPKLLNLKEPLPEASKHGTESLFFDKVRKALRSTEAYENF
LRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESAHMETFPKERATEGIA
MEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKT
QYEEHIYRCEDERFELDVVLETNLATIRVLETIQKKLSRLSAEEQAKFRLDNTLGGSSEV
IHRKALQRIYADKAADIIDGLRKNPAVAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEK
YYLKSLDHQGINFKQNDTKVLRSKSLLSEIETIYDERQEQTSEDNAGPHLSLAYEDRQIL
EDAASLIIHHVKRQTGIQKEDKYKIKQVMYHFIPDLLFAQRGELSDVEEEEEEELDGDEG
SGSVKKHNGVGGSPPKAKLLFSNTAAQKLCGMDDVYNLFYVNNNWYIFLRLHQILCLRLL
RIYTQAERQIEEESREREWEREVLGVKRDKSDSPAIQLRLKEPMDIDVEDYYPAFLDMVR
NLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTELYLSE
NTSSATGGPLSSQSSRSLPETAYQRKAEQLMQDENCFKLMFVQSRGHVQLTIELLDTEEE
NSDDPVEAERWTDYVDRYVNSDSTSPELREQLAQKPVFLPRGSLLYRNLRRIRKCQRGRE
QQEKEGKEGNSKKPLENVESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLRAHQSHER
VSKRLHQRFQAWVDRWTKEHVTREMAAETSKWLMGEGLEGLVPCTTTCDAEDLHFVSINK
YRVKYGTVFKTP
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacgattggaagaccaggagtcacctgtgtatgcgtcacagcagagacgtatc
gccagcaacacagaaccttttcaacaccagcatcgcatgcttgctccagcacctcctgta
tatgagtctgtaccagagaccatgcaatctgctgctggaatccagtattctgtaacgccc
aactaccaggtgtccactgtgccacagagctccagcagtcatgggcctgccctagcagct
gtccacagtgggcatcaccaccccaccccggtccagcctcatgggagccaggtggtcccg
agtcatgctcaccccaccccgccagcagcacccgtgcaaggccagcagcagttccagagg
ctgaaggtggaagatgccctctcctaccttgaccaagtgaagctgcaatttggtagccag
cctcaagtctacaatgacttcttggacataatgaaggaattcaaatctcaaagcattgac
actccaggagtgatcagccgggtttctcagctgttcaaaggccaccctgatttgattatg
ggtttcaacactttcctgccccctggctacaaaatcgaagtgcagactaacgacatggtg
aatgtaacgacaccagggcaggtccaccagattcccacccacggcctccagccccagcct
cagccccagcctcagcatccatctcagccatccgcacagtccgctccgacgccagcacag
ccagctccacagccaccgcctgccaagatcaacaagccatcccagctgcagacgcatacg
ccaaccagccaacagactcccccgctcccgtacgcgtcccctcgctcgccaccggtgcag
ccccacacgcctgtgacaatctcccttggaaccacaccgtccctccagaataatcagccg
gttgagtttaatcatgccatcaactatgtcaacaagataaagaatcgtttccagggacag
ccagacatttacaaagctttcttggagatcctccatacctatcagaaagagcagcggaat
gccaaggaggccggaggcaactacaccccagcgctgacagaacaggaggtgtatgcccag
gtggcccgcctcttcaagaaccaggaggacttgctctcggagtttgggcagttcttgcca
gatgccaacagctctgtgctgttaagcaagaccacggcagaaaaagtggagtctgtgaga
aatgaccatgggggcacagtcaagaagccccagctcaacagcaagcagcaaaggcccaac
cagaatggctgccagatccggcggcatgccacagctgggacaacccctcccgtgaagaag
aaaccaaagctacttaatctgaaggagccactgccagaagccagcaagcatgggacagag
tctttgttctttgacaaggtccgcaaagctctgcgcagcaccgaagcgtatgagaatttc
cttcgttgcctagtaatttttaatcaggaggtgatatcccgagctgaacttgtacagctg
gtttctccatttttggggaaattcccagagctatttacttggtttaaaaacttcctaggc
tacaaagagtctgcacacatggagacgtttccgaaggaacgggctacagaggggatagca
atggaaatagactatgcctcttgtaagaggctgggctccagctaccgagccttgccaaag
agttaccagcagcccaagtgcacaggtcggactccgttgtgtaaggaggttttgaatgac
acctgggtctcatttccttcttggtctgaggactccacgtttgtgagctctaagaagaca
cagtatgaagagcacatctaccgatgcgaggatgaacgatttgagctggacgttgtcttg
gagaccaatctggcaaccatcagagtcctagagacgatacagaagaaactgtcccgctta
tctgctgaagagcaagccaaattccggctggacaacaccttgggtgggtcctcagaagtt
atccaccgcaaggcactgcagaggatatatgcagacaaggcagctgacatcattgatgga
cttaggaaaaacccggcggttgcagtacccattgtattgaaaaggttaaaaatgaaagaa
gaagagtggcgagaagcccagagaggattcaacaaagtgtggcgggaacagaacgagaaa
tactacctgaaatccctcgaccaccaagggatcaacttcaaacagaatgacaccaaggtc
ttaagatcaaagagtcttctcagtgagattgagacgatttatgatgagaggcaagaacag
acctctgaagataatgctggccctcacctgtctctggcctacgaagatcggcagatcctg
gaagatgcagcctctctgatcatccaccacgtgaagcggcagacaggcatccagaaggag
gacaagtacaaaatcaagcaggtcatgtatcacttcatcccagacttgctctttgcccag
cggggtgagctctcagacgttgaggaagaggaagaggaagagctggatggggacgaaggc
tctgggtctgtgaaaaaacacaatggtgtcggaggcagcccccctaaagccaaactgctg
ttcagtaataccgcagcccagaagctgtgtgggatggatgatgtctacaacctcttctac
gtcaacaacaactggtacatcttcctccgcctccaccagatcctgtgtttgcgactgctc
cggatatacactcaggccgagcggcagatagaagaggagagtcgggaacgagagtgggag
cgggaagtgctgggcgtcaagcgggacaagagcgatagccctgccatccagttgcggttg
aaggagcccatggatattgatgtggaagattattaccctgcttttctggacatggtgcgg
aacctgctggatggtaacatggactcttctcagtacgaggattctcttcgtgagatgttc
accattcatgcctacattgcctttaccatggacaagctgattcagagtattgttcgacag
cttcagcatatagtgagtgatgaaatatgtgtgcaggtgacagaactctacctgtcggag
aacaccagcagcgctactggaggcccactgtcctcccagtcttctcgctcccttccggag
acagcgtaccagcgtaaagctgagcagctcatgcaagacgagaactgcttcaagttgatg
tttgtccagagcagaggccatgttcagttaactattgagctgctggacacagaagaggag
aactcagatgatcctgttgaggcagagcgttggactgactacgtggatcggtacgtcaac
tctgattctacctctcccgaactccgggaacagttggctcaaaagcccgtatttctgccc
aggggttctctgctttacaggaatctgaggaggatccgcaagtgtcagcggggtcgggag
cagcaggagaaggaagggaaggaggggaacagtaagaagcccttggagaacgtggagagc
ttggacaagctggagtgcaaattcaagctgaactcctataagatggtgtatgtgatcaag
tcagaggattacatgtaccggaggaccgctctcctgcgtgctcatcagtcccacgaaaga
gtgagcaaaaggctgcaccagcgattccaggcctgggtggaccggtggaccaaggagcat
gtgacccgcgaaatggccgctgagacaagcaagtggcttatgggggaaggcctggaaggc
ctggtgccctgcaccaccacctgtgacgcggaggacctgcactttgtgagcattaacaag
taccgcgtcaaatacggcacagtgttcaagacgccctaa
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