Hemicordylus capensis (graceful crag lizard): 128335094
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Entry
128335094 CDS
T08891
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 isoform X1
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcg04040
]
128335094 (HCN4)
Ion channels [BR:
hcg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
128335094 (HCN4)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
128335094
NCBI-ProteinID:
XP_053128883
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Position
10:complement(17520946..17620871)
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AA seq
1248 aa
AA seq
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MDRLPPSMRKRLYSLPQQIGPKASIMDEEEEEDEAAGGGGGDQDARRKSIKLKPLPSPSA
APRGARGLGAAEPSRPGGGEGAAGLAEGGEAAAGCRASSSAARTGTNGDCRRFKGSRSSL
ASRQPHDSAEGRRLIGSEGDAASPGEERSPPGLSDNEQGSPVSPAAAGDACSPLPPPEGQ
PQPSASAFVKVEGAGGPGGGGGGGGGGGGDQITPDDEQRLDQAGFMQRQFGAMLQPGVNK
FSLRMFGSQKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFK
DENTTPWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFVVDFIS
SIPVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMT
YDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPNDCWVSLNSMVNDSWGKQYSYA
LFKAMSHMLCIGYGQQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQ
EKYKQVEQYMSFHKLPAEMRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRK
LVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNK
ETKLADGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAL
DRLDRIGKKNSILLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHNVQAAAAASAP
TPVIWTPLIQAPLQAAAATTSVAIALTHHPRLPTAIFRPPVSVLGSLGQPSHQTPRQLKR
LHSLVSSTGPSVVGSPSGTPSQQHTPGAESLSSSSFRIQRLAGFTASAGLGQFHHTSAGS
PSAGSSQQALGSPSSAELGQLQLEPSDSPERTVQQQHASDSNLLSGFGPFQKGPPATSPP
TAFSQLSSNSPGSPLSHLQPTCKPLQVGQSQQLSGTGVLRGTNHFQLPPSSSSPSSSLSQ
LAQAPGGFSSALCQTQPSALGPSAAPATIAQLHHERSPFASLSPLKQPPAAAPLSYPPGL
SPPTQSPATRTSPCSLSRAMGSHGSLLMPQTSSPPPQVLQPRSTPPLPPERLTQDLKLIS
ASQPSLPQDAAQTLSQGSPHSSRESVSSFSSFTGGGGGGSRPLGKPYSSGPGRTALPRQP
SSGSLPQSPLFEASSIISPSLTAAEGRKGSLGLTGEQEQVRSKLPSNL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggaccggctgccgccgtctatgcgcaagcggctttacagcctgccccagcagatcggc
cccaaagcgtcgatcatggacgaggaggaggaggaggacgaagcggccggcggcggcggc
ggcgaccaggacgcccgtcgcaagagcatcaaactgaagccgctgccctccccgtcggcg
gcgccaaggggcgctcgcgggctcggggcggctgagccgtcgaggcccggcggcggggaa
ggcgctgcggggcttgcggagggcggcgaggctgcggccggctgcagggccagcagcagc
gccgccaggaccggcaccaacggggactgccggcgtttcaaggggagccgctcgtcgctc
gccagccgccagccccacgactcggccgaggggcgtcggctgattggcagcgagggggat
gcggcgtcgcccggcgaggaaaggagccccccgggcctctcggataacgagcaaggctcc
cccgtctctccggcggcggccggggatgcctgctcgccgctgccgcctcccgaggggcag
cctcagccctctgcctctgccttcgtcaaagtggagggggctgggggtcccggaggagga
ggaggaggaggaggaggaggagggggcgatcagataacgccggacgacgagcagcgcctg
gaccaagccggcttcatgcagaggcagttcggggcgatgctgcaacctggggtcaacaaa
ttctccttgaggatgttcggcagccagaaggccgtggagcgggagcaggaaagggttaag
tctgccggcttctggatcatccacccttacagtgatttcaggttttactgggacttgact
atgctgcttctgatggttggcaacctgatcatcatccccgtgggcatcaccttcttcaag
gatgagaacaccacgccatggattgttttcaacgtggtctcggacaccttcttcctcatt
gacctggtcctcaacttccgcacagggattgtggtggaagacaacacagagatcatcctg
gacccacagcggattaagatgaaatacctcaagagctggtttgtggtggattttatcagc
tccattccggtagactatattttcctgattgtggaaacccgcattgattcagaggtttac
aagactgcccgagccctgcggattgtgcgcttcaccaaaatcctcagcctcttgcggctt
ctcaggctttccaggctgatacgctatatccatcagtgggaggagatcttccacatgacc
tatgacctggcaagcgctgtggtgaggatcgtgaacttgattggcatgatgctactgctg
tgtcactgggatggctgcctccagttcctggtgcccatgcttcaggacttcccgaatgac
tgttgggtttctctgaacagcatggtgaatgactcctggggaaagcagtattcctatgcg
ctgttcaaggccatgagccacatgctgtgcatcggctacgggcagcaagccccggtgggc
atgtccgacgtatggctcaccatgctgagcatgatcgttggcgccacctgctatgccatg
ttcatcggccacgccacagccctcatccagtctttggactcctcacgccgacagtaccag
gagaagtacaagcaagtggagcagtatatgtctttccacaaactcccagctgagatgcgc
cagagaattcatgactactatgagcaccgctaccagggcaagatgtttgatgaagagagc
atcctgggagaactgagtgaacctctgagggaggagatcataaatttcaactgccggaag
ctggtggcctccatgcctctgtttgccaatgcagaccccaattttgtgacctccatgctg
accaagctgcgtttcgaggtgttccagccgggtgactacatcatccgggagggcaccatc
gggaagaagatgtacttcatccagcacggggtagtcagtgtgctcacgaaggggaacaag
gaaaccaagctggctgatggttcctactttggagaaatttgcctgctgacccgtggccgg
cgcacagcaagtgtgcgagctgacacatactgccgcctctactccctctcagtggacaac
tttaatgaagtgctggaggagtatcccatgatgagaagggcttttgaaacagtggcactg
gacaggctggacagaattggtaagaagaactctatcctgcttcataaagtccagcacgac
ctaaactcgggagtcttcaactaccaggagaacgagatcatccagcaaattgtgcagcac
gaccgagagatggcccactgtgcgcataatgtccaagctgccgctgcagcatctgcaccc
acccctgtcatctggacccccctcatccaggcaccgctgcaagccgcagcagccaccacg
tcagtagcaatagctctcacccaccaccctcgccttccaacagccattttccgtcctcca
gtctctgtcttgggttctctgggacagccttcacaccagacaccgaggcagctgaaacgg
cttcattccttggtgtcgtctactgggccttcggtggtgggctcgccttccggcacacca
tctcagcagcacactccaggagctgaatctctttcatcctcctccttccggatccagcgg
ctggccgggttcacagcctctgccggcttaggccagttccaccacacctcagctggctct
ccttctgctggctccagccagcaagccttgggcagcccgtcgtctgcagagctgggccag
ctacagctagagccttccgactcaccggaaaggactgttcagcagcagcatgcttctgac
agcaatctcttgagtggctttggccccttccagaagggcccacccgccacttctccaccc
accgctttcagccagctatcctccaattcacccggcagccccctcagccacttgcaaccc
acttgcaagccgctccaggtagggcagtcacagcaactctcaggaactggagttctgaga
gggacaaaccactttcagttgcctccctcgtccagttctccatcgtctagcttaagccag
ctggcacaggcccctggaggcttctcttcggccttgtgccaaacccagccaagtgcatta
ggaccttcagcagcacctgcaaccatagctcagttgcaccatgaaaggtctccctttgcc
tctttgtctccattaaaacaacctcctgctgctgcccctctttcttaccctccaggcctt
agtcctcctactcaaagccctgccactaggacttctccgtgcagcctttccagggcgatg
ggctcccatggatctctgctgatgcctcagacctcgagtccacctccacaggtcctccag
cccaggagtacgccgccacttccacccgaacgactgacgcaggacctcaagctgatctct
gcttcccagccctccttgccccaagatgcagctcagactttaagccaaggttctcctcat
tcctctagagagtctgtttctagtttctcatccttcacaggaggaggaggaggagggtct
agacctctggggaagccatacagctctgggccagggagaaccgctctgccacgccagccc
tcctcaggttctctgcctcagtcgcccctgtttgaggccagctccatcatctctccctct
ctgactgctgccgaagggaggaaaggatctctagggctcactggggaacaagaacaagtc
cgatctaaactgccctccaatttgtga
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