Hemicordylus capensis (graceful crag lizard): 128335154
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Entry
128335154 CDS
T08891
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcg03400
]
128335154 (PMS1)
DNA repair and recombination proteins [BR:
hcg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
128335154 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
DUF2271
PKI
Motif
Other DBs
NCBI-GeneID:
128335154
NCBI-ProteinID:
XP_053129039
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All DBs
Position
1:210920210..211010025
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AA seq
927 aa
AA seq
DB search
MKQLPAETVRILSSSQVITSVVSVVKELIENSLDANATSADVKLENYGFDKIEVRDNGDG
IKAADVPVMAMKHYTSKISSSEDLENLTTYGFRGEALGSICCTSEVLITTKTAADDFSTQ
YVLDRCGHVIAQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTDKKCKEEIKKIQKVLMAYG
IIKPELRITFTHNKTVIWQKTRVSDHKMALMVVVGTAVIGNMVPFQHHCEDPEVFLSGFL
PKPDSDNCLTSHSSSERSFIFVNNRPVYQKEILKLAQKYYSMKSQKDSNRLYPIFLINIT
IPPSTVDVNLTPDKSQVLLHNKDSVCSAMEDVLISIYGPLAEAISCETDTTDATSKDTVT
NETAQTDGPINETESCGNTDLSPYTSLFSFSNDVQNGETGKKTDVCLKNQTFYNASPHYI
PTKEISGNETSRSERFQDRSLNNLQCKDQQNKCKVIFNLDDNTSVDTHSKNGIEVDLRND
CVQEKTQRDTVPKDCSEVPADKWSLGNAFKNSRGENLEPVQILIPNMGEARVQKKNDGDN
HLQLQQENNQSIKKSNVVNDKQGQITAYDLIRSQIIRKPMSAFSLFTQDHRPRLLTENTK
ASTEELMMKMEEMWNALNEEEKKKYEEKADKDLERYNRQSKRAMDQSVQGATKERDKRGK
AKLKECLSNQPKVDKLFHSQIEKKRNCQAIKTVQVPFSMESFKHKLYMLKQKESSKDERC
LIHLLNFPDAWIIASEKKIMMLNPYRVEEALLLKKLLENHKLPIQKLDKTIVLTDSLLSG
SHYMDVLWNMRKENVRFDGSSYLSDSRLIANGFKIKIIPGASAVESQLEIEGMTNCVPYY
GISDLKEILSAVINNNAEEVYKCRPLKVVNYLEGEAVRLSRQLPLYLSKEVVQDTILRME
KQLGNKHKSCVHGRPFVHYLTDIPQSD
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaattgccagcagaaactgtccgaattctttcgagttcacaggtgatcacatca
gttgtcagtgtggttaaagagctgatagagaactccttggatgctaatgcaacaagtgct
gatgttaaattggaaaactacggttttgataagatcgaagtacgagacaatggtgatggg
atcaaagcagctgatgttcctgtcatggcaatgaaacactacacctcaaaaataagctct
tctgaggatcttgaaaacttgacaacatatggttttcgtggagaagctttgggctcaatt
tgttgcacatcagaggttctgatcacaacaaagacagctgctgatgattttagcacacag
tatgttttggatagatgcggtcatgtaattgctcaaaagccatctcatcttggacaaggt
acaactgtaacagttctgaagctgttcaagaatttgcctgtaaggaagcagttttattca
acagataaaaaatgtaaagaagaaattaaaaaaattcaaaaggttctgatggcatatggc
atcataaaaccagaactaaggatcacgtttacacacaacaagacagttatttggcaaaaa
accagggtgtcagatcacaaaatggctttgatggtagtagtgggaactgctgttataggc
aacatggtaccttttcaacaccattgtgaagatcctgaggtatttcttagtggcttcctt
ccaaagcccgattcagacaactgtttaacaagtcattcaagttcagaaaggagcttcatc
ttcgtaaacaatcgaccagtgtaccagaaagaaattctcaagctggcccagaagtactac
agcatgaagtcacaaaaggattctaatcgtttatatcccatttttttaatcaacattact
attcctccatccactgtggatgtcaatttaacaccagataaatctcaagtattgctgcat
aataaggattctgtctgttctgctatggaagatgtcttaatatcgatatatgggcctcta
gctgaggccatttcttgtgaaactgatacaacagatgctacctcaaaagataccgttacc
aatgaaactgcacaaacagatgggcccattaatgaaactgaatcttgtggaaacacagat
ctgtctccatatacttcattgttttcttttagtaatgatgtgcaaaatggtgaaacaggg
aaaaaaacagatgtctgtttgaagaatcaaacattttataatgcgtctcctcattatatc
cctaccaaagaaatatcaggcaatgagacatccaggtctgagagatttcaggacaggtca
ctaaacaatttacaatgcaaggaccaacagaataagtgcaaggtaatatttaatctagat
gacaatacttcagtggacactcattctaaaaatggcattgaggttgatttgagaaatgac
tgtgtgcaggaaaaaacacagagagacacagtcccaaaagattgttctgaagtacctgct
gataaatggagcctggggaatgcatttaaaaattctagaggagaaaacctggaacctgtt
cagattttaattcctaacatgggagaagcaagagttcagaagaaaaatgatggtgataat
catttacaacttcaacaggaaaataatcaaagtattaaaaaatcaaatgtggtaaatgat
aaacagggacagattacagcctatgatttaattagaagtcagataataaggaaacccatg
tcagcattttccctttttactcaagaccatcggcctaggttgttgactgaaaataccaaa
gcaagcacagaagaactaatgatgaaaatggaagaaatgtggaacgcactgaatgaagaa
gagaaaaagaaatatgaggaaaaagctgataaagacctggaacgatataaccggcaaagt
aaaagagctatggatcaaagtgttcaaggagcaacaaaagaaagagacaaaagaggcaaa
gccaagctgaaagaatgtctgtctaatcagccgaaagttgacaaactttttcattctcaa
attgaaaagaaacgcaactgccaagcaataaaaactgtgcaagtgcccttctctatggag
tcatttaaacacaaactttacatgcttaaacagaaagagtcaagtaaagatgaacgttgc
ctaattcatcttctgaattttcctgatgcatggataattgcctctgagaaaaagataatg
atgctgaatccatacagagtagaagaggctcttctgcttaaaaaacttcttgaaaatcat
aaacttcctatacagaaactggacaaaacaattgtactaactgacagtcttcttagtggc
tctcactacatggatgttctctggaatatgcgcaaagaaaatgtaagatttgatggatcg
tcttatttgtcagattcaagacttatagcaaatggatttaagataaaaataataccaggt
gcttcagctgtggaaagtcagctggaaatagaaggaatgaccaactgtgtgccatactat
ggtatatcagatttgaaagaaattctgagtgctgtgataaataataatgcagaagaagtc
tataagtgtagaccgctcaaagtggtaaactacttggagggagaagcagtgcgattgtcc
cggcagttgcctttgtatttgtcaaaggaagttgtacaggacacaatactcagaatggag
aaacaacttggaaataagcataaaagctgtgttcatggccgtccatttgttcattattta
acagatattccacagagtgactag
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