Hemicordylus capensis (graceful crag lizard): 128335337
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Entry
128335337 CDS
T08891
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128335337 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcg03000
]
128335337 (ATRX)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128335337 (ATRX)
Transcription factors [BR:
hcg03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
128335337 (ATRX)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
128335337 (ATRX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
128335337
NCBI-ProteinID:
XP_053129351
LinkDB
All DBs
Position
11:2635061..2719278
Genome browser
AA seq
2381 aa
AA seq
DB search
MTAEPVSESKLNTLVQKLHDFLAHSSEESEDANSPPRLSVSKNTDNISMPGNIPAPMENS
REEGSSSSEKSKSLGSSRSKRKPTVVTKYVGSDDEQPLDETMDQDVSNENSENDVDMKSL
PKGTVVVQPEPVLNEDKDDFKGPEFRNRNTAKMKPETQKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCFKYYMSDDISRDADGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTIMDENNQWHCYICQPEPLLDLVTACDSVFENLEQLLQQNKKRIR
VDNEKSKMYDNTLKYSSKKNSSSCNGEGKKLDRPYSGALTYSYKALMVPKDLLKKTKKLV
ETTTNMNASFVNFLKAATANAEINPTVHLRQLKAFKSVLSDIKKAHMALEEGLTLEIQAL
DTKIKQKNTKVKETEIKADNSEVRKTEGKEFKEHKTAPEVSEHMDQNVLMTERMGSKKSS
CKDKKSGKADELQYEPNSTEATDRDIVSVPSSVPEDIFESCVEAQKAAGEQGTGSRAAEH
GAVNANSKSKDNRGGVKLTKVTKELVVKLTPVSLSSSPVKAEDSDGKPEKGDKREGGKEN
HNSATECPPENEISSVVEDTDLRRSPRVKTTPLRRPADINTLTSNSEEDSNDAYREKSRR
KSTQSKRKKEKPSSPDSTVCSPRSNALSEVKKADTADQSSDSEEIPAVLQEVAMMSHSSS
DIDSNSEMPKDVLNDLNRHPAKEDNGKRKRKCSSSGSDFDAKKGKSSKNLTAAKKKRQNN
SDSSNYDSELERETENLSKIEPAKKAAKKGLKRENCDSSEGEPNKKGGGSSKQQSESCNE
VDDELSNPDEKLLNSLEDASCKETTVKEKRTRERSSKSKQTDMPEKEESNDSGKTSSPLA
KEGQDSSSEDTGQSLKREQSGESSDDARKKVRKGAKEKESGNQRKTPAKGQNDSSSEIEK
SSPEKEGCRISGSSSKKPGPIEGKTRRNLRERTSKKLPGNSDTEKSPKKEQAGDTSDDNL
NAKGNHAKEKKKASPKRRNSKNVTGNLLSSSDEDYYEEKKNKARGAAVKGSKKSNRKERG
RTNAKTTKNDSTTSTSSSSNEAENEDLDSGGEASSDEQKIKPVTESMLGASKIGFCQSSG
DEGENKSGTVPMEEEEDDDDDPENRIAKKMLLEEIKANLSSEEDASSDDEELDDKKKKKK
KGKQTENTGDNEENELEEDSDSDSDSDSDSDAEEAKKPRYRHRLLRHKLTMSDGESEDDK
GKSKEAKEVKRRNRRKVSSEDSDNSEANESGVSEDFSESEDDQRPRTRSAKKAELEENQR
SYKQKKKRRRIKVQEDSSSENKSNSDDEENDDSKSPGKGRKKIRKIIKDDKLRTETQNAL
KEEEERRKRIAERERERLKLREVLLQSYIPVIELEDTPLKCPITTKLVLDEDEETKEPIV
QVHRNIVTKLKPHQVDGVQFMWDCCCESVKKTKKSSGSGCILAHCMGLGKTLQVVSFLHT
ILLCDKLDFRTALVVCPLNTALNWLNEFEKWQEGLEDDEKLEVGELATVKRPQERSYMLQ
RWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVICDEGHILKNETSA
VSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCA
DSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLAVRMTPLQCKLYQYY
LDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSLDEF
IASDSEETSVSLSSDEYTKKKKSKGKKSKKDSSSSESGSDNDVEVIKVWNSRSRGGGEGN
AEESASNPPAIAKAEEGKTTPSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFDILRM
AEELGDKVLVFSQSLISLDLIEDFLDLANRDQEEGKPVIYKGEGKWFRNIDYYRLDGSTT
AQSRKKWAEEFNDVTNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPTYDIQSIFRV
YRFGQNKAVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFE
PDLLDDPNSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEER
KAAWAEYEAEKKGLTMRFNMPVGANMFHPSFNAQTPYIPFNLAALSAMSNQQLEDLINQG
REKVMEATNNVTGARIQPLEDIISTIWKENLTLTESQVQALALSRQASQELDVKRREAIY
NDVLTKQQMLISCVQRILMNRRLQQQYNQQQQQQQQLSYQQAAMSHLMMPKPPGLIMNPS
NFQQIDMRGMYQSAAGALHPPPLQRAPPPMGGKNPGPSQGK
NT seq
7146 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggagcccgtgagtgaaagcaagttgaatacattggtgcagaagcttcatgac
ttcttggctcactcatctgaagaatcggaggatgcaaattctcctccaagactctctgtg
agcaaaaatacagataacattagtatgcctggaaatattccagcaccaatggaaaacagc
agggaagagggtagtagctcttctgaaaaatccaaatcattaggatcatcgcgttccaaa
aggaaacctacagttgtaacaaaatatgttggttcagatgatgaacagcccttagatgaa
actatggatcaagatgtttcgaatgaaaactcagaaaatgatgttgatatgaaaagctta
cctaaaggtacagtagttgtacagccagagccagtgctgaatgaagacaaagatgatttc
aagggacctgaattcagaaacagaaatactgccaaaatgaaacctgaaactcaaaaaaag
cgtggagaggaagggctgcatggtattgtcagctgtacagcttgtggtcagcaggtgaac
cattttcaaaaggattcaatctacagacaccccacattgaaagtactaatttgcaagact
tgcttcaaatattatatgagtgacgacatcagccgtgatgcagatggaatggacgaacag
tgcagatggtgtgctgaaggtggaaacttaatctgctgtgacttttgccataacgccttc
tgtaaaaagtgcatattacgcaacttgggccgaaaggagctgtccacgataatggatgaa
aacaaccagtggcactgctatatctgccagccagaacctttgctggacttggtcactgcc
tgtgacagtgtctttgaaaacttagaacaattgttgcaacagaataaaaagagaatcaga
gttgacaatgagaaaagtaaaatgtatgacaatacacttaaatattcttcaaagaaaaat
agttcaagttgtaatggagaaggaaagaaattggatcgtccatattctggtgctctaacc
tattcttacaaagcattgatggtgccaaaagacctgcttaaaaaaacaaaaaaactggtt
gaaaccacaacaaacatgaatgctagttttgtaaattttttgaaggcggcaactgcaaat
gctgagataaacccaacagtgcacttacgccagttgaaggcttttaaatctgtgttgagt
gacatcaaaaaggctcacatggcattagaagagggtctgactctcgagattcaggctctg
gatactaaaatcaagcagaaaaataccaaagtgaaagaaactgaaatcaaagccgataac
agtgaagtgagaaaaacggaaggaaaggaattcaaagaacacaaaactgcaccagaggtc
agtgagcatatggaccagaatgtattgatgacagaacgaatggggagcaagaaatcgagc
tgcaaagataaaaaatctgggaaagctgatgagcttcagtatgaacccaatagtactgag
gcaacagacagggacattgtatctgtcccctcctccgttcctgaagatatttttgagtct
tgtgtggaagcgcagaaagcagcaggtgaacagggcactggcagccgagcagccgagcat
ggggcagtaaatgcaaactcaaaatctaaagacaatagggggggagtgaaattgacaaaa
gtaacaaaagaattggttgtgaaactgactccagtttccctctccagttctcctgtaaaa
gctgaggattcagatggaaagccagaaaagggagataagagagaaggtggaaaagagaac
cataacagtgctactgaatgtccacctgaaaatgaaatctcttcagtggtagaggataca
gatctcagaaggtctccacgtgtgaaaaccacccctctgagaaggccagcagatataaac
accttaacttctaattcagaagaggacagcaatgatgcataccgtgaaaaaagcaggaga
aaatccacacaatctaaacgaaagaaagagaagccaagttctccagacagcactgtttgc
agtcctcggtctaatgctctctctgaggtaaagaaagcagatacagcggaccaaagttct
gattctgaagagatacctgctgttctccaagaagtcgccatgatgagtcacagttcttca
gacattgacagtaacagtgaaatgcccaaggatgtcttaaatgatttaaacagacatcca
gcgaaggaggataatggaaagcgaaaaagaaaatgttcaagttctggatcagattttgat
gctaagaaaggcaagtcaagtaaaaatctaactgctgctaaaaagaaacgccaaaacaac
tcagattcttccaattatgattccgagctggaaagagagacagagaatttgagtaaaatt
gagcctgcaaagaaagctgcaaaaaagggtctaaagagagagaattgcgattcttcagaa
ggggaaccaaataaaaaaggggggggaagttcaaagcagcagagtgaatcgtgcaatgaa
gttgatgatgaactctccaatccagatgagaagcttctgaattctttggaagatgcatct
tgtaaagagaccactgttaaggagaagcgaacaagggagagatcctccaaaagcaaacag
actgacatgcctgaaaaagaggagagtaatgactcaggcaagacaagcagtcctttggca
aaggaagggcaggattcttcttctgaggatacagggcagtctttaaagagagagcagagt
ggtgagtcatcagatgatgctagaaagaaagttagaaaaggtgcaaaagaaaaggagagt
gggaaccagagaaaaactcctgcaaaagggcaaaatgattcctcttctgaaattgagaag
tcttcacctgaaaaagagggttgcagaatttctggaagtagcagtaagaaaccaggtcct
attgagggaaagacgagaaggaacctgagagagagaacttctaagaagctcccaggtaat
tcagatactgagaagtctcccaagaaagaacaggccggtgatacttcagatgacaactta
aatgcaaaaggaaatcatgctaaagaaaagaaaaaagcaagccccaaaaggagaaattcc
aaaaatgtgacaggcaatttattgtcctcttctgatgaagactattatgaggagaaaaag
aacaaagcaagaggggcagctgtcaaaggaagtaagaagagtaatcgcaaagaaagagga
agaactaatgctaaaacgacaaagaatgacagtactaccagcacttcttcatcgtcaaat
gaagctgagaatgaagacctggattctggaggcgaggcaagcagtgatgagcagaagatt
aagccggtgacagagagcatgttgggggcttcaaaaattggattttgtcaatcttcagga
gatgaaggagagaataaatcgggaactgtaccaatggaagaggaggaggatgatgacgat
gatcctgagaatagaattgccaagaaaatgcttttagaagaaatcaaagccaatctttcc
tcagaggaggatgcttcttctgatgatgaagagctggatgataagaagaagaagaagaag
aaggggaagcaaactgaaaacacaggcgacaatgaagagaatgaactggaagaggactcg
gactcggactcggactctgactctgactcagatgctgaagaagctaagaaaccaagatat
agacaccgattgttgagacacaagttgacaatgagtgatggcgaatctgaggacgacaag
ggaaaatctaaagaagcgaaagaagttaaacgcagaaatagaagaaaagtgagcagtgaa
gattcagataattcagaagctaatgaatctggagtcagcgaagacttcagcgagtctgaa
gatgatcagcgtccacgaacaaggtctgctaagaaggcggagctagaagaaaatcagcga
agttacaagcagaaaaagaaaagacggcgcatcaaggtccaggaagattcatccagtgaa
aacaagagtaattctgacgatgaagaaaatgatgattcaaaatctcctgggaaaggaagg
aaaaaaataagaaagattattaaagatgacaagctcagaacagaaacacaaaatgcactg
aaggaagaggaagagagaaggaaacgtatcgcggaaagggaacgagagagattgaagcta
agagaagtactattgcaatcttatattccggtgatagaactagaagatacaccactcaag
tgtccaattacaactaagttggttttagacgaagatgaagaaaccaaagaaccaatagta
caggttcacagaaacatagttacgaaattgaagccacatcaagtagatggtgttcaattt
atgtgggattgctgctgtgaatctgtgaagaaaacaaagaaatcttcaggctctggatgt
attctggcccactgtatgggtctgggaaagaccttacaggtagttagttttcttcatact
attctgttgtgtgacaaactggatttcagaacggctcttgttgtttgtccactgaacacg
gccctgaattggttgaatgaatttgagaaatggcaagaaggtttagaagatgatgagaaa
ctagaggttggcgaactggcaacagtgaagcgccctcaggagaggagttacatgctgcag
agatggcaggatgaaggaggcgtcatgattataggctatgagatgtaccgtaaccttgcc
caaggaaggaacgtgaagagcaggaagctgaaagaaatatttaacaaagcactcgttgat
ccaggccctgattttgtgatatgtgatgaaggacacatattaaaaaatgagacttctgct
gtttccaaagctatgaattctataaagtccaggaggaggatcattcttacaggaactcct
ttgcaaaacaacctcatagaatatcactgcatggttaacttcatcaaggagaacttgctt
gggtcaataaaagagttccgaaatcgatttataaatccaatccaaaatggacagtgtgca
gactctaccatggtagatgtcagggtgatgaaaaagcgcgcccacatcctatatgaaatg
ttagccggatgtgttcagagaaaagattatacagcactaacaaagttcctgccaccaaaa
tatgaatatgttctagctgtaagaatgacccctcttcagtgtaagctctatcagtactac
ttggatcatttaacaggtgtcggcaacagcagtgaaggtggaagaggcaaagctggagca
aaactcttccaggatttccagatgttaagcagaatttggactcacccttggtgcttgcag
ctggactatattagcaaagagaataagggctattttgatgaagacagtcttgatgagttc
atagcatcagattctgaagagacatcagtcagcttaagctccgatgaatatacaaaaaag
aagaagtcaaagggcaaaaaatccaagaaggatagtagctccagtgaaagtggcagcgat
aatgatgtcgaggtgattaaagtctggaactcaagatctcgtggaggtggagaaggaaat
gcagaagaatcagcaagcaatcctccagccattgcaaaagcagaagaaggtaaaaccacc
ccctcttccaaccctggcagcccagctccggactggtacaaagactttgtcaccgatgcg
gatgctgaagtgttggagcattctgggaagatggtacttctctttgacattcttcgcatg
gctgaggaacttggggataaagtcttagttttcagccagtccctgatatctctggatttg
attgaagactttcttgatctggcaaaccgggaccaagaagaaggcaaacctgtaatatat
aaaggtgaaggcaaatggttccgaaatattgattattatcgtttagatggctctactact
gcccagtcaagaaagaagtgggctgaagaattcaatgatgtgactaatgtcagaggccgt
ttgttcattatctccactaaagcaggatccctcgggatcaatctggtggctgctaacaga
gtgatcatttttgatgcctcttggaatccaacctatgatatccagagtatcttcagggtt
taccgttttgggcaaaacaaagccgtgtttgtttatcggttcttggctcaggggacaatg
gaagacaagatatatgatcgtcaagtaaccaaacagtcattgtctttccgggtggttgac
cagcagcaggtagaacggcacttcaccatgaacgaactcactgagctctatacttttgaa
ccagacttgttggatgatcctaattcagaaaagaagaagaaaagggatacaccaatgttg
cccaaagatacaattttggcggaactgctccagatccacaaagaacacatcgtgggctac
catgagcatgattccctcctggaccacaaagaggaagaggagttgacggaagaggagagg
aaggcagcctgggctgaatatgaagcggagaaaaagggcctgacgatgcgtttcaacatg
ccggtgggggccaacatgttccaccccagcttcaacgctcagaccccctatattcctttc
aatttggcagccctgtctgccatgagcaaccagcagctggaggatctcattaatcaaggc
agagaaaaagtcatggaagcgactaacaatgtcactggagcaagaattcagccccttgaa
gacataatttctactatatggaaggagaatctgaccctcacagagtcccaggtccaggct
ctggccctgagccgacaggcaagccaggaactcgacgtgaagcgccgggaagcgatctac
aatgacgtcctgaccaagcagcagatgttaatcagttgcgttcagaggattctgatgaac
cgaagactacagcagcagtacaatcagcagcagcagcagcagcagcagctgtcctaccag
caagcagccatgagccacctgatgatgccaaagcctcctggtttgattatgaatccttcc
aacttccaacagatcgatatgagaggaatgtatcaatccgctgctggtgcgctgcatcct
ccgcccttgcagcgtgctcctcccccaatggggggcaaaaatccaggaccatcccaaggg
aaataa
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integrated database retrieval system
