Hemicordylus capensis (graceful crag lizard): 128335410
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Entry
128335410 CDS
T08891
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128335410 (ZC3H12B)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
128335410 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
128335410
NCBI-ProteinID:
XP_053129558
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All DBs
Position
11:4764272..4798220
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AA seq
834 aa
AA seq
DB search
MTAWSRVERLKMEKRHSQEERTAEQDGGDCSPESEDWTSSESEPEQPCFQNSCSNPQWRE
KEISHKPHRQLCRSPCLDRPSFSQSSLLQDLKLEENKTNLSKEYQAKIDFALKLGYAGDQ
IEAVLNKLGADALINDILAELVRLGNKVENEGQASTGSTPGTSGASTKEAASPELSLEDE
VVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQS
RPDAPITDQEILHKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDSDGIIVSNDNYR
DLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKKPVIPEHKKQPCP
YGKKCTYGHKCKYYHPERANQPLRSVADELRISAKLSAVKTMSEGALVKCGTGPILSKGE
TTSEVKRIAPKRQSDPSIRSVAVEPEERLSMARKSEANSVPSLVSALSVPTIPPSKSHAV
GALNTRSASSPVPGSSQFTHQKSSLEHMASMQYPPILVTNSHGASVNYTDHYPKYESLGD
HGYYSMLSDFSNLSISSMHNTDYYRADVDQGIYSRNSSPCPDSCLSHTSNDSYSSYTDLY
LGVGDTSPEDNVKVHRLPPQSRLQPFSHGYHESLTRVQSYGTEGSKHSPRKHSASLALHV
QHPVIGARSSCPGDYPVPQNMHPSATAQPSRALVMTRMDSVSDSRLYESNPARQKRPPLC
REQHASWDPLPCATDAYAFHSYPLSHNLMQPCYEPVMVRSMPEKMEQLWRNPWVGVCGEP
QEPHIIPEHQYQTYKNLCNIFPANVVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctagggtggaaagactgaaaatggagaagaggcattcccaagaagag
aggactgctgagcaagatggtggcgattgcagccctgaatcagaagactggacaagctcg
gaaagcgagccagagcagccctgctttcagaacagctgcagcaaccctcagtggagggag
aaggagatctcccacaaaccacaccggcaactttgccgctcgccttgcttggaccgcccg
agtttttcacagagcagcctccttcaggatttaaaattagaagagaataaaacaaacttg
agcaaggaatatcaagctaaaatagattttgctttaaagctggggtatgctggagaccag
attgaagccgtgttgaacaagctgggggcagatgcactcatcaatgacattttggcagaa
cttgtgagacttggaaacaaggtggagaacgaaggacaagccagcacgggaagtacccct
gggacctctggagcaagtaccaaggaagctgccagtccagagctgtctctggaggatgaa
gtggtagacaactctgacaacttgagacccatcgtcattgatgggagtaatgtggcaatg
agccatggcaataaagaaggattttcctgtcgagggattcagctcgctgttgactggttt
ctggagaaaggtcataaagacattacagtgtttgtgcctgcatggaggaaagagcagtct
cgacccgatgccccaattacagaccaagagatcttacacaaactggagaaagaaaaaatt
ctcgtcttcaccccatctcggagagttcaggggaggagggtggtctgctacgacgaccgc
tttattgtgaagctggcttatgattccgacggcatcattgtatccaatgacaattatcgc
gacctccaaaatgaaaagccagagtggaagaagttcatagaggaacggctcctgatgtat
tcgtttgtgaatgacaagtttatgccacccgatgacccattgggacgccatggccccagc
cttgaaaatttcctaaggaaaaagcctgttattccagaacacaaaaaacaaccatgtcct
tatggcaaaaagtgcacctacggacacaaatgtaaatattaccacccggaacgagcaaac
cagcccctgagatccgtagcagatgagcttcgtatcagtgccaaactctctgctgtgaaa
acgatgagtgaaggtgctctggtcaaatgtggcacggggccaatcctttccaaaggggaa
accacttcggaagtgaagcgcattgctcccaaacgccagtcggatccgagcattcggtct
gtggctgtggagcccgaggagaggctgtcgatggcacggaagtcggaggccaactctgtc
ccgtcccttgtttctgcattaagtgttccgaccattccgccttccaaaagccatgctgtt
ggggcattaaatacgcggtccgctagtagccccgtgccaggctcatctcagttcacccat
cagaagtcctccctggagcacatggccagcatgcagtatcctcccatcctggtcaccaat
agccatggtgcttcagtcaactacaccgatcattaccccaaatacgagtctttgggggac
cacggctattattccatgctcagcgacttctccaacttgagcattagtagcatgcataac
actgattattacagggctgacgtcgaccaaggtatctattcaaggaactccagcccctgc
cccgacagttgcttaagccatacaagtaacgattcttactcctcttacacggacttgtat
ctgggtgtaggagacacaagcccagaagacaacgtgaaggtccatcgcctcccgccacaa
agccgcctccagcctttctcccacggttaccacgagtccttaactagagttcagagctat
ggcaccgaagggtcgaaacattctccgcgcaagcattcggcctctctggcactacatgtc
cagcacccagtcattggcgcacgctccagctgcccaggtgattaccctgtgcctcagaac
atgcacccgtcggccactgcccagccgagccgtgccctcgtcatgacccgaatggacagc
gtttcggactcgcggctctatgaaagcaaccccgcgcggcagaagcggccgcccctctgc
cgagagcagcatgctagctgggatccattaccatgtgccacagatgcctacgccttccat
tcttacccactgagccacaatctcatgcagccgtgttatgaacctgtcatggtcagaagc
atgccggagaaaatggagcagctctggaggaatccttgggttggcgtctgcggggagccg
caggaaccccacatcatccccgagcaccaataccagacctataagaatctctgcaatatt
tttcctgcaaacgtcgtcctctctgtaatggagaagaatcctcacatgacagatgcgcag
cagttggcagcgatgattgttgccaaattgagaacagggcgttaa
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