Hemicordylus capensis (graceful crag lizard): 128335439
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Entry
128335439 CDS
T08891
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128335439 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcg01009
]
128335439 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcg04515
]
128335439 (PCDH11X)
Protein phosphatases and associated proteins [BR:
hcg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128335439 (PCDH11X)
Cell adhesion molecules [BR:
hcg04515
]
Cadherins
Protocadherins
128335439 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
Fibulin_C
TMEM154
Cadherin_4
DUF6249
Motif
Other DBs
NCBI-GeneID:
128335439
NCBI-ProteinID:
XP_053129665
LinkDB
All DBs
Position
11:25869780..26521206
Genome browser
AA seq
1245 aa
AA seq
DB search
MDLLSETYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAVDPDIGVNGIQHYELLK
PKTAPKRTFGSITNEQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GNPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSSQISSLAKRLFAIDNSTGLITIKEPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNIPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYTLGLDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGKDKFIIDPLTGVIRPNITFDREQQGSYTFQVR
ALDGGRLQRSSTAKVTINVVDVNDNRPVFIIPSSNYSYDLVPMSTSPGSVVTKVFAIDND
TGMNAELRYSIIGGNSRGLFMIDQLTGNVTLKEKVISADHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETATNGSYIQELVRRNMETPIGQNVGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKSKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGS
IHTRQHSKEVGRPQTPLKETSLESWTQPQSQRRVTFHLPDGSQESCSDSGLGDHEPSSTA
STSHPLPLGFPQEEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQSNPPLPTFGFQQGWVRGAMTDGRHTLGRLIPKDDTDKGPGGQRP
QFYNTCERHCTSEDPVKVIPLANFIPAQATPISGSNTTLIHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctttccgagacctacctcttggcagtcttattagcctgcattgtatttcag
tctggagctcaggagaagaattacacagtgcgggaggagttgccagaaaatgtcttaatt
ggcaatttgctcaaggacctcaacctgactctggacccagatgtgcccctttcatcgcct
ctgcagttcaagcttgtgtacaagactggggacgttccgctggtccgtgtggaggagaat
actggagaaattttcaccactgccaaccgtatcgatcgggagaagctttgctctggcatc
ttcagcgagaaccgttgtttttacgaggtggaagttgctgtcctgcctgatgaagttttc
aggctggtcaagatcagattcttgattgaggatataaatgacaatgcccctctctttcct
tcgacagtcattaatatctccatccctgagaacacggctatcaattcccgctattcagtc
ccatctgcagtcgatcctgacattggagtgaatggcattcagcactatgaactgctaaag
cccaaaaccgctccgaaaaggacttttggatccattaccaatgaacagggtcaaaatgta
tttggacttgatataattgagacacccgaaggagacaagtggcctcagttgatagtccaa
cagatacttgacagggagcagaaggacacctatgtgatgaaaattaaagtggaagatggc
ggaaaccctccaagatccagtactgccatcctccaagtaacagtgaccgacgtgaatgac
aaccgccccgtcttcaaggagaatgacattgaggtcagcgttcccgagaatgccccggtg
ggcacctccgtttctcagcttcatgccacagatgctgacttggggtcgaatgcccagatc
cacttctatttcagcagccagatctccagtctggccaaaaggctatttgccatagataac
agcactggtctcatcaccatcaaggagccgctggaccgggaggaatccccagttcacaag
ctaacagtcctggcaagcgacggcagttcaacaccttcaagagcaacggtgacagtaaat
gtcacagacattaatgataacattccatcaatagacacgcgatacattatcaacccagtg
aatggcactgtgcttttgtcggagaaagctccactcaatactaaaattgccctgattaca
gtaatggataaggatgctgacctcaacggcaaagttacctgcttcactgaccatgatgtg
cccttcaggttaaagcccgtgtttgataatcagtttctgttggagacagccacattcctg
gactatgaggccacgcgggaatatgccattaaaatagtggcttctgattcggggaaacca
cccttgaaccagtctgcaatgctgctcatcaaaatcaaggatgagaatgacaatgcccca
gtgttcacgcaacccattattggactttcaatcccagaaaacaatgcacctggcacccag
ttgactaagatcagtgcgacagatgcagacagtggacgcaatgcagagatcagctacaca
ctgggcctggatgctccccccattttcaacctggaccgccgtacaggcattctgacagca
gtgagaaagctggacagggaaaaacaagacagatactcattcactgtcctggctaaagat
aatggcatgccacccttgcagacgaatgccactgtgacagtttcagtcttggaccaaaat
gacaacagccctgctttcacacacaatgagtataacttctatgtgccagaaaacctaccc
atgtatggcactgttgggcttatcactgtaacagatgcagactctggagagaatgcggca
gtgaccttgtctatattaaatggcaaagataaattcattattgatcctctcactggagtc
ataaggcctaatattacctttgacagggagcagcaagggtcttacacctttcaggtgaga
gctttggacggagggaggctacaacgctcctcaactgccaaggtgaccatcaatgtggtg
gacgtgaatgacaacagaccagtgttcatcatcccttcatctaactactcttatgacctg
gttccaatgtccacgagtccaggctctgtagtgaccaaggtgtttgccattgacaatgat
acagggatgaatgcagagcttcgctacagcattattggtgggaattcacggggcttgttt
atgattgatcagctaacaggcaatgttaccttaaaagagaaagtcatatcagcagatcat
gggttgcacaggctggttatcaaagtcaacgatttgggacagcctgagtctctgtacact
atagcgctcgtgcacttgtttgtgaacgaaactgctaccaatggatcctatatccaagag
ctagtgcgccgaaacatggaaactccaattggccagaatgttggggatggtgagatcacc
ccacagaccaatgactatgtcaagatcatcattgctatcattgcaggcaccatgacggtc
atcctggtgatcttcgtgactgccttggtgcgatgccgccaaacccctaggcacaaggtg
gtccagaaaagcaagcagagtggtgagtgggtctcccccaaccaagaaaaccgccagatc
aagaaaaagaagaaaaagaagaagcgttcgcccaaaagccttcttctcaactttgtgacg
attgaagaatcgaagcctgacgatcccggtcacgagcacatcaatggtactttggacatt
ccggtggagctagaagaacagactatgggaaaatataactgggccacaacacccaccacc
tttaagcctgacagcccagatttagcaaagcactacaagtctgcctctccgcagcccacc
tttcagataaaacctgagactccagtgcccccgaagaagcaccatgtcatccaggaactg
cctctggataacacctttgtggtgggctgcgattccctctccaagtgttcctccagcagc
tcggacccttatagtgtctctgaatgcagctgtcaaggagggttcaagactccaggctcg
atccacaccagacagcattcaaaagaagtaggaagaccacagacaccattaaaagagaca
agtctagagtcatggactcagccacagtcacagcgccgagtcacgtttcatctacctgat
ggctctcaggaaagctgcagtgacagtggcctaggagaccatgagcccagcagcaccgca
agcacatcacaccctttaccactcggtttcccccaagaagaatactatgaacagacatca
cccaacagtcggacagagggagatgggaactcggatccagagtccaccattgaggtgaac
ctccagaaagctcttgccgaagcctccgagacctgcacgcaggaatgcctcatcctcggt
cactccgacaattgctggatgcctccttccttgacacagtatcaacaatccaaccctcct
ttgcctacctttggctttcagcagggatgggtacgaggagccatgacagatggaaggcac
actcttggaaggctgatccccaaggacgacactgacaaaggcccaggaggacagaggccg
cagttctacaacacctgtgaaagacactgcaccagcgaagacccagtcaaagttattcct
cttgcaaacttcattcctgcccaggcaacacccatctctgggagtaacaccactttgatc
catgagcaccagctataa
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integrated database retrieval system
