Hemicordylus capensis (graceful crag lizard): 128336165
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Entry
128336165 CDS
T08891
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128336165 (SUPT6H)
03036 Chromosome and associated proteins [BR:
hcg03036
]
128336165 (SUPT6H)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
128336165 (SUPT6H)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
128336165 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
FAST_1
Motif
Other DBs
NCBI-GeneID:
128336165
NCBI-ProteinID:
XP_053131364
LinkDB
All DBs
Position
12:11020097..11053975
Genome browser
AA seq
1723 aa
AA seq
DB search
MSDFVESEAEEESEEEFNEDGEVVPRPTKKFVEEDDDEEEEENLDDQDEQGNLKGFINDD
DDEEEEDDEEASDSGDSDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKMS
DDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGDAVEGPMAPAEEEEEEEEDESDIDDF
IVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEDLEDEYVYEP
EEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRVTDMPERFQLRSIP
VKNAEDDELEEEADWIYRNAFAMPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKEALN
FMRNQHFEVPFIAFYRKEYVEPELNINDLWRVWQWDEKWTQLKLRKQNLTRLFEKMQAFQ
YEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKA
NRKKQKRVREDGEEEEGEDDVEDEEQKGPELKQASRRDMYTICQTAGLDGLAKKFGLTPE
QFGENLRDSYQRHETEQFPAEPLELAKDYVCGQFPSPESVLEGACYMVALQIAREPLVRQ
VLRQTFQERAKINISPTKKGKKDVDEAHYAYSFKYLKNKPVKELRDDQFLKMCLAEDEGL
LTIDLCIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTLAIERALNQFLYTQ
MAKELKNKLLVEAKEFVVKACSRKLYNWLKVAPYRPDQQVEEDDDFMDENQGKGIRVLGI
AFSSARDHPVFCALVNGEGEVTDFLRLPYFTKRRNAWREEERERKAQDIETLKKFLLSKK
PHVVTIAGENRDAQMLMEDVKRIAHELDQGQQLSSIGVELVDNELATLYMNSKKSENEFR
DYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNSLYCEFIN
RVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHMG
PKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDAN
PAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRSQYRSP
NSEEVFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQD
NFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVH
CRIMKIDIEKFSADLTCRTSDLMDKSNEWKLPKDTYYDFDAEAADHKQDEELKRKQQRTT
YIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDNIYQHVDVR
EEGKENAFSLGATLWINTEEFEDLDEIVARYVQPMASFARDLLSHKYYQDCNGGDRKKLE
ELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRNHIFPTV
NGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQMF
SAIAAVTGQGQNANATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLLTPSYSFT
TPSQPITTPQYPQLQANTTPQSTQSQPPSQPSSSSGQRQQPKSSSHTAIDWAKMAEQWLQ
EKEAERRKQKQRLTPRPSPSPMIESTPMSVAGDATPLLDEMDR
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtggagagtgaagccgaggaggagtctgaggaggagttcaatgaagac
ggggaggtggttcccagaccaaccaagaagtttgtagaagaagacgacgatgaggaggag
gaggagaacctagatgatcaggatgagcaggggaacctgaaggggttcattaatgatgac
gacgatgaagaggaggaggatgacgaggaggccagtgattcgggagactccgatgttggg
cataaaaagagaaagcggacttttgatgatcgccttgaagatgatgactttgacctcatt
gaagaaaacttgggcgtcaaagttaaacggcaaaaattcaggcgggtgcggaagatgtct
gatgatgaagacgacgaagaggaggattacggcaaggaagagcacgagaaggaagccatt
gctgaagagatcttccaggatggggagggcgaggagggaggcgatgctgttgaaggcccc
atggcccctgctgaggaagaggaggaggaagaggaagatgagtctgacattgatgacttc
atcgtggatgacgatgggcagccgctgaagaagcccaagtggaggaagaagctccctggc
tacacagatgctgctttgcaagaagctcaggagatctttggagtggactttgactacgat
gagttcgagaaatacaatgagtacgatgaggatctggaggacgagtatgtgtacgaaccc
gaagaggcagaaggcgagatccgcgtccggcccaagaagaccaccaagaaacgcgtcagt
cgccgcagcatctttgagatgtacgagcccagtgagctggagagcagccacttgacggat
caggacaacgagatccgggtgaccgacatgcctgagaggttccagctgcgttcaatacct
gtgaagaatgccgaagatgacgagctggaagaagaagcggactggatctaccggaatgct
tttgccatgcccaccatctccctgcaggagagctccgattacctggaccgcggccaggcc
agcagcagcttcagccgcaagggccccagcaccatccagaagattaaagaagccctgaat
ttcatgcggaaccagcatttcgaggttccgttcatcgccttctacaggaaggagtacgtg
gaaccggagctgaacatcaatgacctctggcgggtgtggcagtgggacgaaaagtggacc
cagctgaagctccgtaagcagaacctgacccgtctctttgagaagatgcaggccttccag
tatgagcagatttctgccgatccagacaagcctctggctgatggaataagggctctggac
accacagatatggagaggctgaaggacgtgcagtcgatggacgagctgaaggacgtgtac
aaccacttcttgctgtattacggccgagacatccccaagatgcagaatgcagccaaggcc
aaccgcaagaagcagaagcgcgtccgggaggacggggaagaggaggaaggtgaagatgat
gtggaagacgaagagcagaaggggccggagctcaaacaagcgtcgcgtcgggacatgtac
acaatctgtcaaacggccggtttagacggcctggccaagaagttcggtctgaccccggag
cagttcggcgagaacctgcgtgacagttaccagcgccacgagacggagcagtttccggcg
gagcccttggagctggccaaggactacgtgtgcggccagttccccagccccgagtccgtg
ttggagggcgcctgctacatggtggccctgcagatcgcccgggagcccctggtccggcag
gtcctgcggcagacgttccaggagagggccaagatcaacatctccccgaccaagaagggc
aagaaggatgtcgacgaggcccactatgcctactcgttcaagtacctgaagaacaagccc
gtcaaggagctgcgggacgaccagttcctgaagatgtgcctggctgaggacgaaggcctc
ctgaccatcgacctctgcatcgacatgaagggggtggagggctacggcagcgaccagacc
tactttgaagagatcaagcagttctactaccgggacgagttcagccaccaggtgcaggag
tggaaccgccagcgcaccctggccatcgagcgggcgctcaaccagttcctctacacacag
atggccaaggagctgaagaacaagctgctggtggaagccaaggagttcgtcgtcaaggct
tgcagccggaagctgtacaactggctcaaggtggcgccttaccggccagaccagcaagtg
gaggaggatgacgacttcatggatgagaaccaggggaaaggcatccgggtgctgggcatc
gccttctcctcagccagggaccaccctgtcttttgtgccctggtgaacggagaaggcgag
gtcacggacttcctgcgcctgccctacttcaccaaacggaggaacgcctggcgagaggaa
gagagggagaggaaggcccaggatattgaaaccctgaagaaattcctgctcagtaagaaa
ccccatgtggtaacaattgcaggcgagaacagagacgcccagatgttgatggaggacgtg
aagcgcattgcccacgagctggaccaaggacagcagctctcctccattggggtggagctg
gtggacaatgagctggccaccctctacatgaacagcaagaagtcggagaacgaattccgg
gattacccccctgtcctgcgccaagccgtctccctggctcgccgcatccaggaccctctg
atcgagttcgcccaggtctgcagctcggacgaggacatcctgtgcctcaagctccaccct
ttacaggagcacgtggtgaaagaagagctgctgaactccctctactgcgagttcatcaac
cgcgtgaacgaggtgggagtggacgtcaaccgtgccatcgcccacccgcacagccaggcc
ctcctgcagtacgtctgtggcctcgggccccgcaagggcacccacctgctgaagatcttg
aagcagaacaacacccggctggagaaccggacccagcttgtcaccatgtgccacatgggg
ccgaaggtcttcatcaactgcgccggattcatcaagatagacacggcgtcgctgggcgac
agcacggattcctacatcgaggtgctggatgggtccagggtccacccggagacctacgaa
tgggcccggaaaatggctgtcgacgccttggagtacgacgagtcggccgaagacgccaac
ccggctggtgccctggaggagatcctggaaaacccagagcggctgaaggacctggatctg
gatgcctttgctgaagagctggagaggcagggctacggagacaaacacatcaccctgtac
gacatccgggcagagctgagctgccgctacaaggacctgaggagccagtaccgctctccc
aactccgaggaggtcttcaacatgctgaccaaagagacgcccgagacgttctacatcggt
aaactgatcatctgcaacgtgacggggatagcccaccggcggccgcagggggagagctac
gaccaggccatccgcaatgacgagacgggcctgtggcagtgccccttctgccagcaggac
aacttccccgagctcagcgaggtctggaaccactttgacagcggctcctgccccggccag
gccattggggtgaagacgcggctggacaacggggtcacgggctttatcccgaccaaattc
ctcagcgacaaggtggtcaagaggcccgaagagagggtcaaggtggggatgaccgtccac
tgcaggatcatgaagattgacattgagaagttcagcgctgacctgacctgccggacgtcg
gacttgatggacaagagcaacgagtggaagctgcccaaggacacgtactacgactttgat
gccgaggccgccgaccacaagcaggacgaagaactgaagaggaagcagcagcgcacgaca
tacatcaagcgggtgattgcccacccttccttccacaacatcaacttcaagcaggccgag
aagatgatggagaccatggaccaaggcgacgtcatcatccgccccagcagcaaaggggag
aaccacctgacggtcacctggaaagtgtcggacaacatctaccagcatgtggacgtccgt
gaggagggaaaggagaacgccttcagcctgggcgccaccctctggatcaacacagaggag
ttcgaagacctggatgaaattgtggcccgctacgtccagcccatggcatccttcgcccgg
gatttgctcagccacaaatactaccaggattgcaacggaggagaccggaagaaactggag
gagcttctgatcaaaaccaagaaggagaagcccaccttcatcccctacttcatctgtgcc
tgcaaggagctgccgggcaagttcctgctgggctaccagccgcgtggcaagccaaggatc
gagtatgtgaccgtgacgccagaaggattccgctaccgcaaccacatcttccccacagtc
aacgggctgttccggtggttcaaggaccactatcaggaccctgtgccagggatcactccc
agcagcagtagcaggaccaggaccccggcatccatcaatgccacccctgccaatattaac
cttgcagatctgacccgtgcggtgaacgccctgccgcagaacatgacctcccagatgttc
agcgccatcgcagcggtgacgggtcaggggcagaacgccaacgccacccctgcacagtgg
gcttccagccagtatggttatgggggcagtggcggcggtagcagtgcatatcacgtcttc
acgacaccagctcagcagccggtggccaccccgctgctgacgcccagctactccttcacc
acccccagccagcccatcacgacacctcagtatcctcagctccaggccaacaccaccccg
cagtccacccagtcccagccgccatcccagccctcttccagttccgggcagaggcagcag
cccaagtccagctcccacacagccatcgactgggccaagatggccgagcagtggctccag
gagaaggaggccgagcgccggaagcagaagcagcgcctgaccccccgcccttcgcctagc
cccatgatcgagagcacgcccatgtctgtggccggagacgccaccccgctgctggacgag
atggaccggtag
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integrated database retrieval system
