Hemicordylus capensis (graceful crag lizard): 128336227
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Entry
128336227 CDS
T08891
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128336227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcg02000
]
128336227
Transporters [BR:
hcg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128336227
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
128336227
NCBI-ProteinID:
XP_053131545
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All DBs
Position
12:24052950..24085872
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AA seq
658 aa
AA seq
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MEKAAPDNETQLLASQKEPGGCKEGDDCAENRLLVQNEANPAVPSQGDKGAANQISNGFS
GAQSPSAGKEGGENVPSATLAAAATTTTTSTTCGVEVRQQLMEVGERETWSKKVDFLLSV
IGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAVFGGIPLFYMELALGQYHRNGCISIWR
KICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLVSSFTAELPWTSCKNAWNTGNCTNY
FSNNTVAWTANSTSPAEEFYIRHVLQIHRARGLDDLGGISWQLTLCLLFIFTIVYFSIWK
GVKTSGKVVWVTATFPYVILFILLIRGATLPGAWRGVLYYLKPDWQKLLATEVWVDAAAQ
IFFSLGPGFGVLLAFASYNKFHNNCYQDALVTSAVNCMTSFVSGFVIFTVLGYMAEMRNE
EVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSTFAGLEGVITAVLD
EFPHVWGKRRELFVLGFIVICFMGALSTLTFGGAYVVKLFEDYATGPAVLAVVFLESISV
AWFYGVNQFCSDVKEMLGFSPGWYWRVCWVAISPIFLLFIICSFMSSPPDLRLFDYNYPY
WTMVVGYCIGTSSFICVPAYMVYRLATTPGTLKERILKSITPEMATEIPFGDIHMNAV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcggcccctgacaatgagacccagctcctcgcctcccagaaggagcccggc
ggctgcaaggaaggggacgactgcgcagagaacagacttctggttcagaatgaggccaac
ccagccgtccccagccaaggcgacaagggggccgcgaaccagatctccaatgggttttcg
ggcgctcagagcccaagtgccggcaaagagggcggcgaaaatgttccctcggccaccctg
gctgctgccgccaccaccaccactacgtccaccacatgtggggtggaagtccggcagcag
ctgatggaggtgggcgagagggagacctggagtaagaaagtggacttcctcctctctgtg
attggctatgcagtagacctgggcaatgtatggcgcttcccttatatctgttaccaaaac
ggaggaggggcgttcctcatcccgtacaccatcatggctgtctttggagggatccctctc
ttctacatggagctcgccctgggacagtatcaccgaaacgggtgcatctccatatggagg
aagatctgtcccatcttcaaaggcatcggctacgcgatctgcatcatcgctttctacatc
gcctcgtactacaacaccatcatggcctgggccttgtactacctggtttcatccttcacg
gcggagctgccctggaccagctgcaagaacgcctggaacacgggcaactgcaccaactac
ttctccaacaacacggtcgcctggaccgccaactccacctccccggccgaagaattttat
atccgccacgttctccaaatacacagagcaaggggcctggatgacctgggagggattagc
tggcagctcaccctctgcttgctcttcatcttcaccatcgtgtacttcagcatctggaaa
ggggtcaaaacgtctggaaaggtggtgtgggtgacagccacgtttccttatgtcatactc
ttcatcctgctgattcggggcgcaaccttgccaggtgcctggaggggggtcctctactac
ctgaagcccgactggcagaaacttctggctactgaggtgtgggtagatgccgctgctcag
atctttttctctctcggcccaggattcggggtcctcctggcctttgccagctacaacaag
ttccataacaactgctaccaggacgccctggtcaccagcgccgtgaactgcatgacgagt
ttcgtgtccgggttcgtcatcttcactgtgctcggctacatggcggagatgaggaacgaa
gaggtttccgaggtcgccaaagacacggggcccagcctcctcttcatcacctatgcagag
gccattgccaacatgcccgcctccaccttctttgccatcatattcttcctgatgttgatc
acgctgggactggacagcacgtttgcaggtctggaaggggtgatcactgccgtgctggac
gaattcccccatgtgtggggcaagcgccgggagctgtttgtcctgggcttcattgtgatc
tgcttcatgggcgctctgtcaaccctgacctttggcggtgcatacgtggtgaaactgttc
gaagactacgccacaggtccggcggtcctggcagtggtgtttctggaatccatttctgtg
gcttggttttacggtgtcaatcagttttgcagtgatgtgaaagagatgctcggattcagt
cccggctggtactggagagtctgctgggttgccatcagcccgattttccttctgttcatt
atttgcagcttcatgtccagcccgccagacctccgactcttcgactacaactacccgtac
tggaccatggtggtgggctactgcatcggcacctcgtccttcatctgcgtccctgcctac
atggtgtaccggctggcaaccactccaggaacattgaaagagcgtattctgaaaagcatc
actccggaaatggccacagaaatcccctttggggacatccatatgaatgccgtctaa
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