Hemicordylus capensis (graceful crag lizard): 128336318
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Entry
128336318 CDS
T08891
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128336318 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcg03021
]
128336318 (CPSF4)
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128336318 (CPSF4)
Transcription machinery [BR:
hcg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128336318 (CPSF4)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128336318 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
128336318
NCBI-ProteinID:
XP_053131695
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All DBs
Position
13:18653667..18664377
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AA seq
269 aa
AA seq
DB search
MQELIASVDHIKFELEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPACKFMHPRFELPMGTTEQPP
LPQPTQPQQKQNNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQPQNNSIGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcatcgccagcgtggaccacatcaagttcgagctggagatcgcggtggag
cagcagctcggggctcagccgctgcccttcccgggcatggacaagtcgggagcggcggtc
tgtgaattttttttaaaagctgcttgtgggaaaggagggatgtgccccttccggcatatc
agtggtgaaaagacggtggtttgcaagcactggctacgagggctgtgcaagaagggagac
cagtgtgaattcttgcatgaatatgacatgaccaagatgccagagtgctacttctattca
aaattcggggaatgcagcaacaaagaatgcccattcttgcacattgacccggagtctaag
atcaaagattgcccttggtatgatcgcggtttttgtaaacatggtcctctctgcagacac
aggcacacccgacgtgttatttgtgtgaattacctggttgggttctgtccagaaggaccg
gcttgcaaattcatgcaccctcgatttgaacttcccatgggaaccacagagcaaccgcca
ctgcctcagcccacacaaccacaacaaaagcaaaacaacaacccaccactccagaggtcg
tcatccctgatccagttaacgagtcagaactcgtctcccaaccaacagaggaccccacag
gtcattggcgtgatgcagcctcagaacaacagcataggcaacagagggcctcggcccctg
gaacaggttacctgctacaagtgtggtgaaaaaggacactatgccaacagatgcaccaaa
gggcacttggcatttcttagtggacagtga
DBGET
integrated database retrieval system
