Hemicordylus capensis (graceful crag lizard): 128336353
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Entry
128336353 CDS
T08891
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03430
Mismatch repair
hcg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128336353 (PMS2)
03460 Fanconi anemia pathway
128336353 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcg03400
]
128336353 (PMS2)
DNA repair and recombination proteins [BR:
hcg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
128336353 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
128336353
NCBI-ProteinID:
XP_053131768
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Position
13:complement(21586803..21606196)
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AA seq
916 aa
AA seq
DB search
MEPRCTEAEEAAREQSAKVIKPIDRKSVHQICSGQVVLNLCTAVKELVENSLDAGASSIE
VKLKDYGANLIEVSDNGCGVEEKNFAGLTLKHYTSKLRDFSDLIRVETFGFRGEALSSLC
ALSDISICTCHKSAKVGTRLVFDHNGKITQRTPYPRQQGTTVSVQQLFCTLPVRHKEFQR
NVKKEYAKMVQVLQAYCIISTGVRINCTNQVGQGKKQAVVSTSGGSALKENIGAIFGQKQ
LQSLVPFVQLPPSDTICEEYGLDTSDMPTDLYTITGFVSRSDHGVGRSTADRQFFFINQR
PCDPTKVSKVVNEVYHMYNRHQYPFIVLNICADSECVDINVTPDKRQILVQKENFLLAVL
KTSLMGMFGSDVNKLVLNQKLLDAEGNSKTVPQDEAEPPHLEMSSSSSLPVPSGKAKSAM
MAVAKLRESFSLHQAKEAPESNKEQHHSPGQRTLAMFFGILDSAKTTSKEAEGRSEMNSS
RSMLPSKSFQKSTDDKDPRCSSTLTESDVGLSTPNKTGSSKEAEVLSKMNSSRSVLPSRN
VKQSTEDKDSGCGSTSTESEVGLSTPEIESGHSCESVTSSPDEEFHVSKEEVQSRSLDTR
DHFWGMKSELDQSKESSFSSKANSCPPNEKRLKIHQPLTPVASSSETKNVPNDTILSQYD
IAVEVKKKSVPLAFSMDMLKVRVKRILQQQQKAAETLRCRKFRAKISPGENKTAEEELRK
EIRKEMFAKMDIIGQFNLGFIIAKLNSDLFIIDQHASDEKYNFEMLQEHTVLQGQKLIAP
QNLNLTAVSENILMENLEIFRKNGFDFVINEGAPATQRVKLISLPTSKNWTFGTQDVEEV
IFMLSDCPGVMCRPSRVRQMFASRACRKSVMVGTALNASEMKKLIAHMGEIEHPWNCPHG
RPTIRHLANLDLVSQE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgctgtacggaagccgaagaggccgctcgggaacagtctgctaaagtcatt
aaaccaatagaccgtaaatcagttcaccagatctgttcaggccaggtggtgttgaatctg
tgtactgcggtgaaagagctggtagaaaatagtctagatgctggcgcttccagtattgaa
gtgaagcttaaagattatggagcaaatcttattgaagtttccgataatggttgcggtgta
gaagaaaaaaactttgcaggcttgactctgaaacactatacttccaagctccgagacttt
tctgaccttatacgtgttgaaacatttggctttcggggtgaagctctgagctccctctgt
gcattaagtgacatttccatttgcacgtgccacaagtctgcaaaggtgggaacacgtctg
gtgtttgatcacaatgggaaaatcactcagcgaaccccttaccctcggcaacaggggaca
accgtcagtgtgcaacagttgttttgtacccttcctgtacggcacaaggaatttcagcgc
aacgtaaagaaggaatatgcaaaaatggttcaggtattacaggcatactgtatcatttca
acaggagtccgaattaactgcaccaatcaggttggccaagggaagaagcaagctgtggta
tccaccagtgggggttctgctttaaaggaaaacattggagcaatatttgggcaaaagcag
ctgcaaagcctggttcctttcgttcagctgcctcctagtgacactatctgtgaggaatat
ggcctggatacttctgatatgccaactgatctctataccatcacaggttttgtgtcccgc
tctgatcacggtgtgggcaggagtacagcagacagacagttcttctttattaatcagcgg
ccctgtgacccgacaaaggtttcgaaagttgtgaatgaagtgtaccacatgtacaataga
caccagtatccatttattgtccttaacatatgtgcagattccgagtgtgtcgacatcaat
gtgacccctgacaaaaggcaaatattggtgcagaaagagaattttttattagcagttctg
aaaacgtctctgatgggaatgtttggcagtgatgttaacaaactcgtcctcaatcagaag
ctgctggatgctgaaggaaattctaagacggtgcctcaagatgaggcagaaccacctcac
ttggaaatgtcgtctagttcctcacttccggttccgagtgggaaagcgaaaagtgcaatg
atggctgtagctaaacttagggagtcattttctctccatcaagcgaaagaggcccctgag
agtaacaaagagcaacatcattccccggggcagagaacgcttgcgatgtttttcggtatt
ttggattctgcaaagacgacaagcaaggaggcagagggtagaagtgagatgaattcaagc
agatccatgcttcctagcaaaagcttccagaaatctacagacgataaagatcccaggtgc
agcagcactttgacagagtcggatgtgggtctaagcactccaaataagaccggctctagc
aaggaggcagaggttctcagtaagatgaattcaagcaggtctgtgcttcctagcagaaac
gtcaagcaatccacagaagataaagactctggatgtggcagcacctcaacggagtcagag
gtgggtttaagcactccagaaattgaaagcggtcacagctgtgaaagtgtcaccagttcc
ccggatgaagaattccatgtttccaaagaagaggttcaaagtaggagccttgacactcgt
gatcatttctggggaatgaaatctgaactggaccaaagtaaagaaagcagcttttcctcc
aaggccaacagttgtcccccaaatgagaagcgtttaaagatacatcaacctcttacgcct
gtagccagttcatcggagacaaagaatgttccgaatgacacaattctgtcacagtatgac
atagctgtggaagttaaaaagaaatcagtgcctttggcgttctctatggacatgttgaaa
gtcagagtaaagaggatacttcagcagcagcagaaggcggcagaaactctgcgttgcaga
aaattcagagcaaaaattagccctggggaaaataaaactgcagaggaggagttaagaaaa
gaaataagaaaagaaatgtttgctaagatggacatcattggccagttcaatttaggattt
ataatagccaagctgaattctgacctcttcatcattgaccaacatgcctcagatgagaaa
tacaactttgagatgttacaagagcacactgttctacaagggcagaagctgattgcgcct
cagaatcttaacttaactgcagtaagtgaaaatatattgatggaaaacctggagattttc
agaaaaaatggatttgattttgtcatcaatgaaggcgctcctgccactcaaagagttaaa
ctaatttctttgccaaccagcaaaaactggacttttgggactcaagatgtcgaggaggtc
atattcatgttaagcgattgccctggggtgatgtgcaggccttcaagagtgaggcagatg
tttgcgtctcgagcgtgtaggaagtctgtgatggttggaactgcacttaatgccagcgag
atgaaaaagctcatcgcccacatgggtgagattgagcatccttggaactgtccacatgga
aggcctacaatacggcacttggccaatctagacctggtttcacaagaataa
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