Hemicordylus capensis (graceful crag lizard): 128336366
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Entry
128336366 CDS
T08891
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128336366 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128336366 (GSPT1)
03012 Translation factors [BR:
hcg03012
]
128336366 (GSPT1)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128336366 (GSPT1)
Translation factors [BR:
hcg03012
]
Eukaryotic type
Release factors
128336366 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128336366
NCBI-ProteinID:
XP_053131809
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All DBs
Position
13:complement(6265524..6298665)
Genome browser
AA seq
658 aa
AA seq
DB search
MEANGGSSSSGSSSSDSAPDCWDQADLEPGSGGGGGGGGPAGSAPDADEAPSPALLDAAA
AADEEQQQEEQQQLGAAFSRHLNVNAKPFVPNVHAAVFVPAFQRSGPGPASAPAPGLPTP
PSPPPPGLPTPATTPHGASVESPQEEQRLSCEGSNAAVSMDISEPVVENGETEMSPEESW
DHKEEAIEPELASGPSGDAGPTEEGAQEMMEEEEEIPKPKSMVAPPGAPKKEHVNVVFIG
HVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVE
VGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTR
EHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPC
SGLTGANLKEPSDFCPWYTGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKL
ESGSICKGQQLVMMPNKHNVEVLGILSDDVETEAVAPGENLKIRLKGIEEEEILPGFILC
DLNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSK
TRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaacggcggcagtagcagcagcggcagcagcagcagcgactcggcgccggac
tgctgggaccaggcggacctcgagcccggcagcggcggaggaggaggaggaggaggcccg
gctggctcagccccggacgccgacgaggcgcccagcccggccctgctcgacgccgccgcc
gctgcggacgaggagcagcagcaggaagagcagcagcagctgggcgcggccttcagccgg
cacctcaacgtcaacgccaagcccttcgtgcccaatgtccacgcggccgtcttcgtgccg
gccttccagaggagcgggccgggcccggcctccgcgcccgccccgggcctgccgacgccg
ccttcgcccccgccgccgggcctgccgacgccggccacgacgccccacggggcatctgta
gaatctccacaagaagaacagcggctgtcttgtgaagggtcaaatgctgccgtcagtatg
gatatctcagaacccgttgtagaaaacggagaaacggaaatgtcccccgaagaatcgtgg
gaccacaaagaagaagccattgaacctgaattagccagtggaccttctggagacgccggg
cctactgaggagggtgcccaggaaatgatggaggaggaggaggagataccaaaacctaaa
tccatggttgcaccgccaggtgctcccaaaaaagaacatgtaaatgtagtattcatcggg
catgtagatgccggcaaatcaacaattggaggacaaataatgtacttgacaggcatggtt
gataaaagaacgcttgagaaatacgaaagagaagctaaagaaaaaaacagagaaacttgg
tacctctcctgggccttggacacaaaccaggaagaacgggacaaaggcaaaacggtggaa
gtgggccgtgcctatttcgaaacggagaagaaacacttcaccatcctagacgctccagga
cacaagagctttgtccccaatatgatcgggggtgcttctcaagctgacctggctgtgttg
gttatttctgccagaaaaggagaatttgaaactggttttgagaaagggggacaaacaaga
gagcatgccatgttagcaaaaacggccggtgtgaaacacttaatagttcttattaataaa
atggacgatccaaccgtaaactggagcaatgaaaggtatgaagaatgtaaagagaagctg
gtgccattcttgaagaaagtgggcttcaaccccaaaaaggatattcacttcatgccctgt
tcaggactgaccggagcaaatctcaaggagccatcggacttttgtccttggtatactgga
ctaccatttattccatatctggacaacttgccaaatttcaacagatcagtggatggacca
atcaggctgccaattgttgataaatataaggatatgggcacggtggttctgggaaagctg
gaatcgggctctatttgcaaaggacagcagcttgtgatgatgccaaacaagcacaacgtg
gaagttctcggaatcctttctgatgacgtagaaaccgaagctgtagctccaggtgaaaat
ctgaaaatccgcctgaaaggaattgaagaggaggaaatcctcccaggatttatcctctgc
gatcttaataacctgtgtcattcaggacgcacttttgatgctcagatagtgataattgag
cacaaatccatcatctgcccaggttacaacgcagtgctgcacattcacacttgtattgaa
gaagttgagatcacagccttaatctgtctggtagacaaaaagtcaggagagaagagcaag
acacggccccgttttgtgaaacaagatcaagtctgcattgcccgtttgcggacggcagga
accatctgccttgagacgttcaaagacttccctcagatgggccgcttcaccttgagagat
gagggtaagaccattgcaattggcaaagttctgaaactggttccggagaaggactaa
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