Hemicordylus capensis (graceful crag lizard): 128336401
Help
Entry
128336401 CDS
T08891
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hcg01002
]
128336401 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128336401 (USP42)
Enzymes [BR:
hcg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128336401 (USP42)
Peptidases and inhibitors [BR:
hcg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128336401 (USP42)
Ubiquitin system [BR:
hcg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128336401 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
128336401
NCBI-ProteinID:
XP_053131927
LinkDB
All DBs
Position
13:21635551..21689753
Genome browser
AA seq
1384 aa
AA seq
DB search
MTIVDKVSESSNPSACQKQPFSSVIPASGDMDSGSAGWGAVSSLEAPKHKISLGPVPGAA
VYSNLSVPDKSKPSTQKDPSAVGDGIAAPQKVLFPAEKICLKWQKPHRVGAGLQNLGNTC
FLNSALQCLTYTPPLANYMLSHEHSKTCHEQGFCMMCTMQAHITQALSNSGNVIKPMAVI
NDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSNKLDRHTQATTFIYQIFGGYLRS
RVKCMNCKGVSDTFDPYLDIPLEIKTAQSVNKALEQFVKPEQLDGENAYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFSGGKITKEVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSNSDIRTVLNQQAYVLFYIRSHDVKNGGE
HIHSVHTPGQSSPRPIINQRVVNSKQAASGFIGPQLPPHMIKNSSHLNGTGSLKETPSSS
VASASNVPLNRPSSAPPATSIQNWTMNRPAPATTPDPSKKKKITISIHNKLSARQTVSHN
CTLENLNKPAPSSTISNPSAVQSTSSASTVSAANRVAKPAAPSESCSKLVMNGKSKLNSS
TLVPYGAESSEDSDEESKGLVRENGHSKSFNGIPIGNAASAAESCCSSCHSAEEEGPQHE
PLESVAVNGALSPEEAPKENGLPCDDPPCQAKSAKSTENPFSKANGLHTKGAPTALPPVP
EDRILDSFRYSQLKALSEEISSSGTENTSEEDGSIKALGSVSNSVSGEKSTKVPSSLPCN
IQNLLPSSDPGIVSTKDDSSGSIVAETEGPPLDTGGQPDPESRALEVEEEFPREGVKEDL
AEKLRGPKEGSTAWKKSPVHPRGVDDGAEDLVPSPFIRSDSECSSQKLAPLSIPEKCQET
QESIKSRVDVPPPGDSSVTKQDATVGSLKDGNRLAGSGEPCAGNPERQELKPHSPLSAKV
CTTKKPGQEHSRPKRAHSESEEREAGQSQAEGHHHKRRRSYSRERAKPEHPRRQHHNGSS
SRFPCSPDPGRGVGKYPPHRSRSRGKGEPERSRHCYGRGEPSWSRERWSSEAPRSWEKSR
PHSHHASSSSSSSHVPRNSRDRKFSPGERDCPKSSHVYSYPYKDYYYQARWTHDPAAKER
EKCDVGPSRADCHHYPAPSQHSSRYPHERCPAVPEEASLHPEASCHKYANRKERKRKRPS
SAGSESDGKSKRRRSSQGESLDEPRGRKHKKQKKKKKKKKSKDKHREREGRHHQDSDPSA
SGSEAETHKHKKKKKKKKKRTKRSEGYDETSAPYTPKPTSLETKHLKEMTQPSSEACRKQ
DRQPQDGDTAALKTKSVEGSNRDGCCPSTGHNVATTDAPSHKDHSQTITEPLEDNFPYTE
ESRW
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagtatctgagtcctccaacccttcggcctgtcagaagcagcct
ttcagctcggtgatccctgcttctggagatatggactcaggctctgctggatggggtgcc
gtatcttctctagaagctccaaaacacaaaatctctttgggtccagtaccaggagctgca
gtctattccaatttgtctgtacccgataaatccaagccctccactcagaaagacccatct
gctgtcggcgatggcattgccgccccacagaaggtcctctttccagcagagaagatctgc
ctgaaatggcagaaaccccaccgtgttggagctggtctccaaaacctgggcaacacgtgt
ttcctcaactccgctctgcagtgtctgacctacacgccgcctctagccaactacatgctg
tcccacgaacactccaaaacctgtcatgagcaaggcttctgcatgatgtgcaccatgcag
gctcacatcacccaggccctttccaactccggcaacgtcatcaaaccgatggctgtcatc
aacgaccttcgacggatagcgaaacattttcgttttggaaatcaggaagacgcacacgaa
ttcctacggtacactgtagatgctatgcaaaaagcatgcctgaacggtagcaacaaattg
gacagacacacacaagctaccaccttcatttatcaaatatttggaggctacctaagatct
agagtaaaatgcatgaactgcaaaggagtttcagatacctttgatccatacctggatatt
ccattagaaataaagacagctcaaagtgttaacaaagctctggagcagtttgtcaagcca
gaacagctggatggtgaaaatgcctataaatgtagcaagtgtaaaaaaatggttcctgca
tctaagagatttacaatacatcggtcgtcaaatgtcctcaccctgtccctgaaacggttt
gcaaacttcagtggtggaaaaattacaaaggaagtgaaatatccagaatatctggatatt
cgtccatacatgtcccagccaaatggagagccaattatttatgtattatatgcagttctg
gtacatactggtttcagctgtcatgccggtcattactactgctacataaaggccagtaat
gggcagtggtaccagatgaatgattccattgtctccaatagcgatatcagaactgtactg
aatcagcaagcttatgtccttttttatatcagatcccacgatgtgaaaaatggtggcgaa
cacattcattccgttcatactcccgggcagtcttcaccccgacccattatcaatcagcga
gtggtcaacagcaagcaggctgcgtccggctttattggaccacaactccctcctcacatg
atcaagaattccagccatttgaatggcactggatccctgaaggaaacgccgagcagttcc
gtagcaagtgcaagcaacgtccccctgaacaggccgtcgtccgctcctcccgctacgtcc
atccagaactggacgatgaacaggccggcccctgctaccacccctgacccttcaaagaag
aagaaaatcaccatcagtattcacaacaagttgtctgctcgccaaacggtctctcacaac
tgcaccttggagaacctcaacaagcccgctccttcgtccaccatttccaacccttctgct
gtccagtctacctcaagcgcatcgaccgtatcggctgctaaccgagtcgccaagccagcg
gctcccagcgaatcatgttccaagctggtcatgaacggcaagtccaagctgaactcaagc
acgctggtcccttacggggcggagtcttcggaggactctgacgaggagtccaaggggttg
gtgagggagaacgggcactccaaatccttcaacggtatcccgattgggaacgcggctagt
gcggcagagagctgctgttcctcctgtcacagtgcggaagaggagggaccacagcacgag
ccgctggagagtgtggctgtcaatggtgctctgagtccagaggaggctcccaaagagaac
gggctgccctgtgatgatcctccttgccaagcaaagtctgcgaaatcgacggaaaatcca
ttttctaaagcaaatggattgcatacaaaaggagcacctacagctttgcccccagtcccg
gaagacaggatcttagactccttcagatacagtcaactgaaagcattatcagaagaaatc
agttcaagtggaacagagaacacttcagaagaggatggcagcatcaaagccttagggagt
gtcagcaacagtgtttccggcgagaaatccacaaaggtccccagcagcctcccctgcaac
atccagaatctcttgccctcttcagaccctggaatcgtttctaccaaagatgactcctct
ggaagtattgttgcagaaacagagggcccacctctcgataccggtggacagcctgaccct
gaatctcgtgccctggaagtggaagaggagttccctagagaaggcgttaaggaggacctt
gcagaaaagctgagaggtcccaaagaagggagcacagcttggaaaaagagccccgtgcac
cccagaggagtggacgacggagcagaggacctggtgccaagtcccttcataaggtctgac
agtgaatgtagttctcagaagcttgcccctctcagtattcctgagaaatgccaagaaacg
caggagagcataaagagccgtgtggatgtccctcctcccggcgattcttccgttacaaag
caagatgcaactgttgggagtctgaaggatggaaaccgactggccgggagtggggaaccc
tgcgcgggcaacccagaaaggcaagagttaaagccccattctccactctcagcaaaagtg
tgcactaccaagaagcccggccaagagcactcccgaccgaaaagggcgcactcggagagc
gaggagcgggaagccggccagagccaagccgaggggcaccaccacaagaggcggcgctcc
tacagccgcgagcgagccaagccggagcaccccaggcgccagcaccacaacgggagcagc
agccgctttccctgcagccctgacccggggagaggcgtgggcaaatacccccctcaccgc
tcccgcagccgggggaaaggggagcccgagaggagcaggcactgctacgggagaggagag
ccgtcttggagccgggagaggtggtcttccgaggcgccgaggagctgggagaagagcagg
cctcacagccaccatgcttcctcctcctcgtcttcttcccacgtccccaggaatagtcgg
gaccgaaagttctctcctggcgagagggactgtccgaagtcgagccatgtttacagttac
ccctataaggactattattaccaagcccgatggactcatgaccccgccgcgaaggagagg
gagaagtgcgacgtcggtccctcacgagccgactgccaccattacccggctccctcccag
cactccagccgctatccccacgagagatgcccggcggtgcccgaggaagccagtctgcac
cccgaggcctcctgccacaagtacgccaaccgaaaggagcggaaaaggaaacgccccagt
tcagcgggcagcgagagcgacgggaaaagcaagcgccgacggagctcccaaggagagtcg
ctggatgagccgagaggccggaagcacaagaagcagaagaagaagaagaagaagaagaag
tcgaaagataaacaccgagagagagagggcagacatcaccaggattcagacccatctgca
tccggctccgaggcagaaactcacaaacacaaaaagaagaagaagaagaagaagaaacgt
actaagagatccgaagggtacgatgagacttcagctccttacacccccaagccaaccagt
ttggaaaccaagcatctcaaggagatgacgcaaccgtcttccgaggcgtgcaggaaacag
gacagacaaccccaggacggagacacagctgctttgaaaacaaagagtgtagaaggtagc
aaccgagatggctgttgcccgtctacaggtcataatgtagccactacagatgcaccttct
cataaagatcatagtcagacaattactgaacctttagaagacaattttccatatacagag
gaatctagatggtga
DBGET
integrated database retrieval system
